RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 CCER2I3L3R5 266 aa11.2□□□□□ -0.62
DDX47-212ENST00000545038 BICRAQ9NZM4 1560 aa11.19□□□□□ -0.62
DDX47-212ENST00000545038 IRX6P78412 446 aaPredicted RBP11.18□□□□□ -0.62
DDX47-212ENST00000545038 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDX47-212ENST00000545038 SETD5Q9C0A6 1442 aa11.17□□□□□ -0.62
DDX47-212ENST00000545038 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
DDX47-212ENST00000545038 PHLDB1Q86UU1 1377 aa11.14□□□□□ -0.63
DDX47-212ENST00000545038 ANP32CO43423 234 aa11.14□□□□□ -0.63
DDX47-212ENST00000545038 TIAM1Q13009 1591 aa11.13□□□□□ -0.63
DDX47-212ENST00000545038 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
DDX47-212ENST00000545038 CUX1P39880 1505 aa11.1□□□□□ -0.63
DDX47-212ENST00000545038 CDK11AQ9UQ88 783 aaPredicted RBP11.09□□□□□ -0.63
DDX47-212ENST00000545038 LRRC9Q6ZRR7 1453 aa11.09□□□□□ -0.63
DDX47-212ENST00000545038 DEKP35659 375 aaKnown RBP11.08□□□□□ -0.64
DDX47-212ENST00000545038 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDX47-212ENST00000545038 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
DDX47-212ENST00000545038 FAM50AQ14320 339 aaKnown RBP11.06□□□□□ -0.64
DDX47-212ENST00000545038 MAP3K1Q13233 1512 aa11.06□□□□□ -0.64
DDX47-212ENST00000545038 KIF27Q86VH2 1401 aa11.06□□□□□ -0.64
DDX47-212ENST00000545038 ERICH6Q7L0X2 663 aa11.05□□□□□ -0.64
DDX47-212ENST00000545038 CCDC184Q52MB2 194 aa11.04□□□□□ -0.64
DDX47-212ENST00000545038 AEBP2Q6ZN18 517 aaPredicted RBP11.04□□□□□ -0.64
DDX47-212ENST00000545038 KDM5BQ9UGL1 1544 aa11.04□□□□□ -0.64
DDX47-212ENST00000545038 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
DDX47-212ENST00000545038 B4GALNT3Q6L9W6 998 aa11.02□□□□□ -0.65
DDX47-212ENST00000545038 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
DDX47-212ENST00000545038 PPP4R2Q9NY27 417 aa11.01□□□□□ -0.65
DDX47-212ENST00000545038 PCF11O94913 1555 aaKnown RBP11□□□□□ -0.65
DDX47-212ENST00000545038 WASHC2AQ641Q2 1341 aa10.99□□□□□ -0.65
DDX47-212ENST00000545038 TONSLQ96HA7 1378 aa10.99□□□□□ -0.65
DDX47-212ENST00000545038 NBR1Q14596 966 aa10.98□□□□□ -0.65
DDX47-212ENST00000545038 ANO8Q9HCE9 1232 aaPredicted RBP10.97□□□□□ -0.65
DDX47-212ENST00000545038 IGF1RP08069 1367 aa10.97□□□□□ -0.65
DDX47-212ENST00000545038 PTPRKQ15262 1439 aa10.97□□□□□ -0.65
DDX47-212ENST00000545038 ERICH6BQ5W0A0 696 aa10.96□□□□□ -0.65
DDX47-212ENST00000545038 MYT1LQ9UL68 1186 aa10.96□□□□□ -0.65
DDX47-212ENST00000545038 AQRO60306 1485 aaKnown RBP eCLIP10.96□□□□□ -0.654e-6■■■■□ 20.6
DDX47-212ENST00000545038 NOP58Q9Y2X3 529 aaKnown RBP10.96□□□□□ -0.66
DDX47-212ENST00000545038 FHAD1B1AJZ9 1412 aa10.96□□□□□ -0.66
DDX47-212ENST00000545038 CCDC18Q5T9S5 1454 aa10.95□□□□□ -0.66
DDX47-212ENST00000545038 P3H3Q8IVL6 736 aa10.94□□□□□ -0.66
DDX47-212ENST00000545038 NCOA2Q15596 1464 aa10.92□□□□□ -0.66
DDX47-212ENST00000545038 UACAQ9BZF9 1416 aa10.92□□□□□ -0.66
DDX47-212ENST00000545038 C11orf95C9JLR9 678 aaPredicted RBP10.92□□□□□ -0.66
DDX47-212ENST00000545038 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
DDX47-212ENST00000545038 PTPN23Q9H3S7 1636 aa10.92□□□□□ -0.66
DDX47-212ENST00000545038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
DDX47-212ENST00000545038 HFM1A2PYH4 1435 aa10.9□□□□□ -0.66
DDX47-212ENST00000545038 DENND4BO75064 1496 aaPredicted RBP10.9□□□□□ -0.66
DDX47-212ENST00000545038 FGD6Q6ZV73 1430 aa10.9□□□□□ -0.66
DDX47-212ENST00000545038 FAM9BQ8IZU0 186 aa10.9□□□□□ -0.66
DDX47-212ENST00000545038 ATP1B4Q9UN42 357 aaPredicted RBP10.9□□□□□ -0.66
DDX47-212ENST00000545038 CARMIL1Q5VZK9 1371 aa10.9□□□□□ -0.67
DDX47-212ENST00000545038 FHOD3Q2V2M9 1422 aa10.89□□□□□ -0.67
DDX47-212ENST00000545038 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
DDX47-212ENST00000545038 CNTLNQ9NXG0 1405 aa10.89□□□□□ -0.67
DDX47-212ENST00000545038 ZBED9Q6R2W3 1325 aa10.88□□□□□ -0.67
DDX47-212ENST00000545038 NAIPQ13075 1403 aa10.88□□□□□ -0.67
DDX47-212ENST00000545038 CFTRP13569 1480 aa10.88□□□□□ -0.67
DDX47-212ENST00000545038 PRKRIP1Q9H875 184 aaPredicted RBP10.88□□□□□ -0.67
DDX47-212ENST00000545038 AKNAQ7Z591 1439 aa10.88□□□□□ -0.67
DDX47-212ENST00000545038 IL27Q8NEV9 243 aa10.87□□□□□ -0.67
DDX47-212ENST00000545038 FYCO1Q9BQS8 1478 aa10.86□□□□□ -0.67
DDX47-212ENST00000545038 NCAPD3P42695 1498 aa10.85□□□□□ -0.67
DDX47-212ENST00000545038 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
DDX47-212ENST00000545038 FGD5Q6ZNL6 1462 aa10.84□□□□□ -0.67
DDX47-212ENST00000545038 LRRIQ1Q96JM4 1722 aa10.84□□□□□ -0.67
DDX47-212ENST00000545038 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
DDX47-212ENST00000545038 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
DDX47-212ENST00000545038 CASKIN1Q8WXD9 1431 aa10.84□□□□□ -0.67
DDX47-212ENST00000545038 CCDC7Q96M83 1385 aa10.83□□□□□ -0.68
DDX47-212ENST00000545038 HMGXB3Q12766 1538 aa10.83□□□□□ -0.68
DDX47-212ENST00000545038 EIF4G2P78344 907 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX47-212ENST00000545038 KDM6BO15054 1643 aa10.82□□□□□ -0.68
DDX47-212ENST00000545038 RNF123Q5XPI4 1314 aa10.81□□□□□ -0.68
DDX47-212ENST00000545038 SENP3-EIF4A1A0A087X0R7 540 aa10.81□□□□□ -0.68
DDX47-212ENST00000545038 CCDC136Q96JN2 1154 aa10.81□□□□□ -0.68
DDX47-212ENST00000545038 SNAPC4Q5SXM2 1469 aa10.8□□□□□ -0.68
DDX47-212ENST00000545038 RTN4Q9NQC3 1192 aaKnown RBP10.8□□□□□ -0.68
DDX47-212ENST00000545038 PRDM2Q13029 1718 aa10.8□□□□□ -0.68
DDX47-212ENST00000545038 SMG6Q86US8 1419 aaKnown RBP10.8□□□□□ -0.68
DDX47-212ENST00000545038 FMN1Q68DA7 1419 aa10.79□□□□□ -0.68
DDX47-212ENST00000545038 L3MBTL2Q969R5 705 aa10.79□□□□□ -0.68
DDX47-212ENST00000545038 ANP32AP39687 249 aaKnown RBP10.78□□□□□ -0.68
DDX47-212ENST00000545038 HECW1Q76N89 1606 aa10.78□□□□□ -0.68
DDX47-212ENST00000545038 NBPF8Q3BBV2 869 aa10.77□□□□□ -0.68
DDX47-212ENST00000545038 ZBTB47Q9UFB7 747 aaPredicted RBP10.77□□□□□ -0.68
DDX47-212ENST00000545038 KIF7Q2M1P5 1343 aa10.77□□□□□ -0.69
DDX47-212ENST00000545038 POLR1AO95602 1720 aaPredicted RBP10.77□□□□□ -0.69
DDX47-212ENST00000545038 FOXD1Q16676 465 aa10.77□□□□□ -0.69
DDX47-212ENST00000545038 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
DDX47-212ENST00000545038 EFCAB5A4FU69 1503 aa10.77□□□□□ -0.69
DDX47-212ENST00000545038 SPATA31E1Q6ZUB1 1445 aa10.76□□□□□ -0.69
DDX47-212ENST00000545038 ABCA5Q8WWZ7 1642 aa10.76□□□□□ -0.69
DDX47-212ENST00000545038 MYOM3Q5VTT5 1437 aa10.76□□□□□ -0.69
DDX47-212ENST00000545038 MTUS2Q5JR59 1369 aa10.76□□□□□ -0.69
DDX47-212ENST00000545038 RTL5Q5HYW3 569 aaPredicted RBP10.75□□□□□ -0.69
DDX47-212ENST00000545038 NUDCQ9Y266 331 aa10.75□□□□□ -0.69
DDX47-212ENST00000545038 GCC2Q8IWJ2 1684 aa10.75□□□□□ -0.69
DDX47-212ENST00000545038 DHX29Q7Z478 1369 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms