RNA–Protein interactions for RNA: ENST00000544855.5

NDUFC1-211, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NDUFC1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-211ENST00000544855 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
NDUFC1-211ENST00000544855 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
NDUFC1-211ENST00000544855 FHAD1B1AJZ9 1412 aa24.37■■□□□ 1.49
NDUFC1-211ENST00000544855 KIF27Q86VH2 1401 aa24.37■■□□□ 1.49
NDUFC1-211ENST00000544855 GRIN2AQ12879 1464 aa24.35■■□□□ 1.49
NDUFC1-211ENST00000544855 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
NDUFC1-211ENST00000544855 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
NDUFC1-211ENST00000544855 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
NDUFC1-211ENST00000544855 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
NDUFC1-211ENST00000544855 ARHGEF11O15085 1522 aa24.29■■□□□ 1.48
NDUFC1-211ENST00000544855 CUL7Q14999 1698 aa24.27■■□□□ 1.48
NDUFC1-211ENST00000544855 IGF1RP08069 1367 aa24.25■■□□□ 1.47
NDUFC1-211ENST00000544855 NUP160Q12769 1436 aa24.25■■□□□ 1.47
NDUFC1-211ENST00000544855 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
NDUFC1-211ENST00000544855 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
NDUFC1-211ENST00000544855 DCAF8L1A6NGE4 600 aa24.13■■□□□ 1.45
NDUFC1-211ENST00000544855 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
NDUFC1-211ENST00000544855 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
NDUFC1-211ENST00000544855 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
NDUFC1-211ENST00000544855 ARAP1Q96P48 1450 aa24.08■■□□□ 1.45
NDUFC1-211ENST00000544855 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
NDUFC1-211ENST00000544855 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
NDUFC1-211ENST00000544855 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
NDUFC1-211ENST00000544855 ERCC6L2Q5T890 1561 aa23.96■■□□□ 1.43
NDUFC1-211ENST00000544855 JPH4Q96JJ6 628 aa23.93■■□□□ 1.42
NDUFC1-211ENST00000544855 EEA1Q15075 1411 aa23.93■■□□□ 1.42
NDUFC1-211ENST00000544855 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
NDUFC1-211ENST00000544855 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
NDUFC1-211ENST00000544855 IQGAP2Q13576 1575 aa23.88■■□□□ 1.41
NDUFC1-211ENST00000544855 CTTNBP2Q8WZ74 1663 aa23.83■■□□□ 1.41
NDUFC1-211ENST00000544855 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
NDUFC1-211ENST00000544855 UGGT2Q9NYU1 1516 aa23.75■■□□□ 1.39
NDUFC1-211ENST00000544855 CARMIL2Q6F5E8 1435 aa23.73■■□□□ 1.39
NDUFC1-211ENST00000544855 KIF21BO75037 1637 aa23.69■■□□□ 1.38
NDUFC1-211ENST00000544855 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
NDUFC1-211ENST00000544855 KIAA0556O60303 1618 aa23.66■■□□□ 1.38
NDUFC1-211ENST00000544855 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
NDUFC1-211ENST00000544855 FAM9AQ8IZU1 332 aaPredicted RBP23.64■■□□□ 1.37
NDUFC1-211ENST00000544855 PTPRGP23470 1445 aa23.61■■□□□ 1.37
NDUFC1-211ENST00000544855 GOLGA3Q08378 1498 aa23.61■■□□□ 1.37
NDUFC1-211ENST00000544855 ADCY10Q96PN6 1610 aa23.59■■□□□ 1.37
NDUFC1-211ENST00000544855 UHRF1BP1LA0JNW5 1464 aa23.5■■□□□ 1.35
NDUFC1-211ENST00000544855 SAMD9Q5K651 1589 aa23.5■■□□□ 1.35
NDUFC1-211ENST00000544855 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
NDUFC1-211ENST00000544855 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
NDUFC1-211ENST00000544855 MAPKBP1O60336 1514 aa23.49■■□□□ 1.35
NDUFC1-211ENST00000544855 ABCC2Q92887 1545 aa23.48■■□□□ 1.35
NDUFC1-211ENST00000544855 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
NDUFC1-211ENST00000544855 NPM1P06748 294 aaKnown RBP eCLIP23.46■■□□□ 1.35
NDUFC1-211ENST00000544855 TTBK1Q5TCY1 1321 aaPredicted RBP23.46■■□□□ 1.35
NDUFC1-211ENST00000544855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.34
NDUFC1-211ENST00000544855 RNF39Q9H2S5 420 aa23.42■■□□□ 1.34
NDUFC1-211ENST00000544855 ABCA8O94911 1581 aa23.4■■□□□ 1.34
NDUFC1-211ENST00000544855 EFCAB5A4FU69 1503 aa23.39■■□□□ 1.34
NDUFC1-211ENST00000544855 KIF13AQ9H1H9 1805 aa23.39■■□□□ 1.33
NDUFC1-211ENST00000544855 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
NDUFC1-211ENST00000544855 PLB1Q6P1J6 1458 aa23.37■■□□□ 1.33
NDUFC1-211ENST00000544855 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
NDUFC1-211ENST00000544855 ABCC10Q5T3U5 1492 aa23.35■■□□□ 1.33
NDUFC1-211ENST00000544855 ZCCHC11Q5TAX3 1644 aaKnown RBP23.33■■□□□ 1.33
NDUFC1-211ENST00000544855 DIP2BQ9P265 1576 aa23.32■■□□□ 1.32
NDUFC1-211ENST00000544855 P3H3Q8IVL6 736 aa23.32■■□□□ 1.32
NDUFC1-211ENST00000544855 SLC4A2P04920 1241 aa23.29■■□□□ 1.32
NDUFC1-211ENST00000544855 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
NDUFC1-211ENST00000544855 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
NDUFC1-211ENST00000544855 ASXL2Q76L83 1435 aa23.28■■□□□ 1.32
NDUFC1-211ENST00000544855 RAPGEF6Q8TEU7 1601 aa23.27■■□□□ 1.32
NDUFC1-211ENST00000544855 RANGAP1P46060 587 aaPredicted RBP23.27■■□□□ 1.32
NDUFC1-211ENST00000544855 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
NDUFC1-211ENST00000544855 ARHGAP35Q9NRY4 1499 aa23.22■■□□□ 1.31
NDUFC1-211ENST00000544855 GLI2P10070 1586 aa23.21■■□□□ 1.31
NDUFC1-211ENST00000544855 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
NDUFC1-211ENST00000544855 EPRSP07814 1512 aaKnown RBP23.16■■□□□ 1.3
NDUFC1-211ENST00000544855 ATP10BO94823 1461 aa23.16■■□□□ 1.3
NDUFC1-211ENST00000544855 NUP153P49790 1475 aaKnown RBP23.16■■□□□ 1.3
NDUFC1-211ENST00000544855 FMN1Q68DA7 1419 aa23.15■■□□□ 1.3
NDUFC1-211ENST00000544855 C1QBPQ07021 282 aaKnown RBP23.12■■□□□ 1.29
NDUFC1-211ENST00000544855 TSPOAP1O95153 1857 aa23.11■■□□□ 1.29
NDUFC1-211ENST00000544855 MAP3K4Q9Y6R4 1608 aa23.11■■□□□ 1.29
NDUFC1-211ENST00000544855 U3KPZ7 1027 aaPredicted RBP23.07■■□□□ 1.28
NDUFC1-211ENST00000544855 HECW1Q76N89 1606 aa23.07■■□□□ 1.28
NDUFC1-211ENST00000544855 PPRC1Q5VV67 1664 aaKnown RBP23.06■■□□□ 1.28
NDUFC1-211ENST00000544855 ARID3CA6NKF2 412 aa23.05■■□□□ 1.28
NDUFC1-211ENST00000544855 CFAP43Q8NDM7 1665 aa23.05■■□□□ 1.28
NDUFC1-211ENST00000544855 CLIP1P30622 1438 aa23.05■■□□□ 1.28
NDUFC1-211ENST00000544855 CACNB1Q02641 598 aaPredicted RBP23■■□□□ 1.27
NDUFC1-211ENST00000544855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.99■■□□□ 1.27
NDUFC1-211ENST00000544855 HNRNPUL2Q1KMD3 747 aaKnown RBP22.99■■□□□ 1.27
NDUFC1-211ENST00000544855 TEX14Q8IWB6 1497 aa22.98■■□□□ 1.27
NDUFC1-211ENST00000544855 ABCA9Q8IUA7 1624 aa22.97■■□□□ 1.27
NDUFC1-211ENST00000544855 KCNH8Q96L42 1107 aa22.97■■□□□ 1.27
NDUFC1-211ENST00000544855 CDK13Q14004 1512 aaKnown RBP22.97■■□□□ 1.27
NDUFC1-211ENST00000544855 PCF11O94913 1555 aaKnown RBP22.96■■□□□ 1.27
NDUFC1-211ENST00000544855 KDM6BO15054 1643 aa22.95■■□□□ 1.26
NDUFC1-211ENST00000544855 MAGI3Q5TCQ9 1506 aa22.95■■□□□ 1.26
NDUFC1-211ENST00000544855 CASKIN1Q8WXD9 1431 aa22.95■■□□□ 1.26
NDUFC1-211ENST00000544855 LRRIQ1Q96JM4 1722 aa22.95■■□□□ 1.26
NDUFC1-211ENST00000544855 CEP162Q5TB80 1403 aa22.94■■□□□ 1.26
NDUFC1-211ENST00000544855 CD109Q6YHK3 1445 aa22.94■■□□□ 1.26
NDUFC1-211ENST00000544855 PLEKHD1A6NEE1 506 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms