RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 NUP160Q12769 1436 aa19.26■□□□□ 0.67
DDB1-223ENST00000543658 IQGAP2Q13576 1575 aa19.26■□□□□ 0.67
DDB1-223ENST00000543658 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
DDB1-223ENST00000543658 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
DDB1-223ENST00000543658 OSCARQ8IYS5 282 aa19.2■□□□□ 0.66
DDB1-223ENST00000543658 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
DDB1-223ENST00000543658 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
DDB1-223ENST00000543658 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
DDB1-223ENST00000543658 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
DDB1-223ENST00000543658 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
DDB1-223ENST00000543658 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
DDB1-223ENST00000543658 DNAJC5Q9H3Z4 198 aa19.08■□□□□ 0.64
DDB1-223ENST00000543658 CEP162Q5TB80 1403 aa19.08■□□□□ 0.64
DDB1-223ENST00000543658 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
DDB1-223ENST00000543658 JPH4Q96JJ6 628 aa19.06■□□□□ 0.64
DDB1-223ENST00000543658 KIAA0556O60303 1618 aa19.06■□□□□ 0.64
DDB1-223ENST00000543658 CLIP1P30622 1438 aa19.06■□□□□ 0.64
DDB1-223ENST00000543658 CARMIL2Q6F5E8 1435 aa19.06■□□□□ 0.64
DDB1-223ENST00000543658 PRG4Q92954 1404 aaPredicted RBP19.02■□□□□ 0.64
DDB1-223ENST00000543658 DISP1Q96F81 1524 aa18.99■□□□□ 0.63
DDB1-223ENST00000543658 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
DDB1-223ENST00000543658 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
DDB1-223ENST00000543658 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
DDB1-223ENST00000543658 FHOD3Q2V2M9 1422 aa18.94■□□□□ 0.62
DDB1-223ENST00000543658 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
DDB1-223ENST00000543658 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
DDB1-223ENST00000543658 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
DDB1-223ENST00000543658 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
DDB1-223ENST00000543658 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
DDB1-223ENST00000543658 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
DDB1-223ENST00000543658 FMN1Q68DA7 1419 aa18.88■□□□□ 0.61
DDB1-223ENST00000543658 PTPRGP23470 1445 aa18.85■□□□□ 0.61
DDB1-223ENST00000543658 RAPGEF6Q8TEU7 1601 aa18.84■□□□□ 0.61
DDB1-223ENST00000543658 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.6
DDB1-223ENST00000543658 PCF11O94913 1555 aaKnown RBP18.82■□□□□ 0.6
DDB1-223ENST00000543658 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
DDB1-223ENST00000543658 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.6
DDB1-223ENST00000543658 ABCA8O94911 1581 aa18.77■□□□□ 0.6
DDB1-223ENST00000543658 UACAQ9BZF9 1416 aa18.75■□□□□ 0.59
DDB1-223ENST00000543658 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
DDB1-223ENST00000543658 PLB1Q6P1J6 1458 aa18.75■□□□□ 0.59
DDB1-223ENST00000543658 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
DDB1-223ENST00000543658 ABCC2Q92887 1545 aa18.74■□□□□ 0.59
DDB1-223ENST00000543658 LRRIQ1Q96JM4 1722 aa18.71■□□□□ 0.59
DDB1-223ENST00000543658 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.59
DDB1-223ENST00000543658 UHRF1BP1LA0JNW5 1464 aa18.7■□□□□ 0.58
DDB1-223ENST00000543658 CFAP43Q8NDM7 1665 aa18.69■□□□□ 0.58
DDB1-223ENST00000543658 APLP2Q06481 763 aa18.69■□□□□ 0.58
DDB1-223ENST00000543658 CCDC18Q5T9S5 1454 aa18.69■□□□□ 0.58
DDB1-223ENST00000543658 CYB5RLQ6IPT4 315 aa18.68■□□□□ 0.58
DDB1-223ENST00000543658 ZCCHC11Q5TAX3 1644 aaKnown RBP18.67■□□□□ 0.58
DDB1-223ENST00000543658 NUP153P49790 1475 aaKnown RBP18.66■□□□□ 0.58
DDB1-223ENST00000543658 EPRSP07814 1512 aaKnown RBP18.64■□□□□ 0.58
DDB1-223ENST00000543658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
DDB1-223ENST00000543658 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
DDB1-223ENST00000543658 CDK13Q14004 1512 aaKnown RBP18.63■□□□□ 0.57
DDB1-223ENST00000543658 TIAM1Q13009 1591 aa18.63■□□□□ 0.57
DDB1-223ENST00000543658 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
DDB1-223ENST00000543658 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
DDB1-223ENST00000543658 KDM5BQ9UGL1 1544 aa18.6■□□□□ 0.57
DDB1-223ENST00000543658 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
DDB1-223ENST00000543658 ATP10BO94823 1461 aa18.58■□□□□ 0.56
DDB1-223ENST00000543658 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
DDB1-223ENST00000543658 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
DDB1-223ENST00000543658 MTUS2Q5JR59 1369 aa18.53■□□□□ 0.56
DDB1-223ENST00000543658 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.55
DDB1-223ENST00000543658 MAPKBP1O60336 1514 aa18.5■□□□□ 0.55
DDB1-223ENST00000543658 PLEKHD1A6NEE1 506 aa18.5■□□□□ 0.55
DDB1-223ENST00000543658 KIF14Q15058 1648 aa18.49■□□□□ 0.55
DDB1-223ENST00000543658 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
DDB1-223ENST00000543658 WDR7Q9Y4E6 1490 aa18.47■□□□□ 0.55
DDB1-223ENST00000543658 TROQ12816 1431 aaPredicted RBP18.47■□□□□ 0.55
DDB1-223ENST00000543658 ASXL2Q76L83 1435 aa18.47■□□□□ 0.55
DDB1-223ENST00000543658 MAGI3Q5TCQ9 1506 aa18.46■□□□□ 0.55
DDB1-223ENST00000543658 ITSN2Q9NZM3 1697 aa18.41■□□□□ 0.54
DDB1-223ENST00000543658 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
DDB1-223ENST00000543658 MYO5CQ9NQX4 1742 aa18.4■□□□□ 0.54
DDB1-223ENST00000543658 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
DDB1-223ENST00000543658 KCNH8Q96L42 1107 aa18.38■□□□□ 0.53
DDB1-223ENST00000543658 NCOA2Q15596 1464 aa18.37■□□□□ 0.53
DDB1-223ENST00000543658 TTC37Q6PGP7 1564 aa18.36■□□□□ 0.53
DDB1-223ENST00000543658 ABCA9Q8IUA7 1624 aa18.36■□□□□ 0.53
DDB1-223ENST00000543658 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
DDB1-223ENST00000543658 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
DDB1-223ENST00000543658 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
DDB1-223ENST00000543658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.35■□□□□ 0.533e-6■■■■□ 20
DDB1-223ENST00000543658 CCNB3Q8WWL7 1395 aa18.32■□□□□ 0.52
DDB1-223ENST00000543658 PREX2Q70Z35 1606 aa18.32■□□□□ 0.52
DDB1-223ENST00000543658 GLI2P10070 1586 aa18.32■□□□□ 0.52
DDB1-223ENST00000543658 ABCC10Q5T3U5 1492 aa18.32■□□□□ 0.52
DDB1-223ENST00000543658 TSPOAP1O95153 1857 aa18.31■□□□□ 0.52
DDB1-223ENST00000543658 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
DDB1-223ENST00000543658 CDC42BPBQ9Y5S2 1711 aa18.29■□□□□ 0.52
DDB1-223ENST00000543658 CFAP74Q9C0B2 1584 aa18.27■□□□□ 0.52
DDB1-223ENST00000543658 MYOM3Q5VTT5 1437 aa18.27■□□□□ 0.52
DDB1-223ENST00000543658 FAM69CQ0P6D2 419 aa18.26■□□□□ 0.51
DDB1-223ENST00000543658 ARHGAP5Q13017 1502 aa18.26■□□□□ 0.51
DDB1-223ENST00000543658 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
DDB1-223ENST00000543658 CD109Q6YHK3 1445 aa18.23■□□□□ 0.51
DDB1-223ENST00000543658 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms