RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
ABCF1-207ENST00000542772 CLASP1Q7Z460 1538 aa9.56□□□□□ -0.88
ABCF1-207ENST00000542772 TNIKQ9UKE5 1360 aa9.56□□□□□ -0.88
ABCF1-207ENST00000542772 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
ABCF1-207ENST00000542772 CTTNBP2Q8WZ74 1663 aa9.53□□□□□ -0.88
ABCF1-207ENST00000542772 SHROOM2Q13796 1616 aa9.53□□□□□ -0.88
ABCF1-207ENST00000542772 DNAJC5Q9H3Z4 198 aa9.52□□□□□ -0.89
ABCF1-207ENST00000542772 UGGT2Q9NYU1 1516 aa9.51□□□□□ -0.89
ABCF1-207ENST00000542772 IQGAP2Q13576 1575 aa9.51□□□□□ -0.89
ABCF1-207ENST00000542772 EHMT2Q96KQ7 1210 aa9.51□□□□□ -0.89
ABCF1-207ENST00000542772 PRG4Q92954 1404 aaPredicted RBP9.48□□□□□ -0.89
ABCF1-207ENST00000542772 DISP1Q96F81 1524 aa9.48□□□□□ -0.89
ABCF1-207ENST00000542772 CARMIL2Q6F5E8 1435 aa9.47□□□□□ -0.89
ABCF1-207ENST00000542772 SAMD9Q5K651 1589 aa9.45□□□□□ -0.9
ABCF1-207ENST00000542772 ARHGAP35Q9NRY4 1499 aa9.44□□□□□ -0.9
ABCF1-207ENST00000542772 ERCC6L2Q5T890 1561 aa9.44□□□□□ -0.9
ABCF1-207ENST00000542772 EFCAB5A4FU69 1503 aa9.43□□□□□ -0.9
ABCF1-207ENST00000542772 ARHGEF11O15085 1522 aa9.43□□□□□ -0.9
ABCF1-207ENST00000542772 KIAA0556O60303 1618 aa9.42□□□□□ -0.9
ABCF1-207ENST00000542772 CLIP1P30622 1438 aa9.42□□□□□ -0.9
ABCF1-207ENST00000542772 CEP162Q5TB80 1403 aa9.42□□□□□ -0.9
ABCF1-207ENST00000542772 P3H3Q8IVL6 736 aa9.42□□□□□ -0.9
ABCF1-207ENST00000542772 RIMBP3CA6NJZ7 1639 aa9.42□□□□□ -0.9
ABCF1-207ENST00000542772 RIMBP3BA6NNM3 1639 aa9.42□□□□□ -0.9
ABCF1-207ENST00000542772 RIMBP3Q9UFD9 1639 aa9.42□□□□□ -0.9
ABCF1-207ENST00000542772 PTPRGP23470 1445 aa9.41□□□□□ -0.9
ABCF1-207ENST00000542772 RANGAP1P46060 587 aaPredicted RBP9.41□□□□□ -0.9
ABCF1-207ENST00000542772 ARAP1Q96P48 1450 aa9.38□□□□□ -0.91
ABCF1-207ENST00000542772 CYB5RLQ6IPT4 315 aa9.37□□□□□ -0.91
ABCF1-207ENST00000542772 FHOD3Q2V2M9 1422 aa9.37□□□□□ -0.91
ABCF1-207ENST00000542772 FMN1Q68DA7 1419 aa9.36□□□□□ -0.91
ABCF1-207ENST00000542772 UHRF1BP1LA0JNW5 1464 aa9.35□□□□□ -0.91
ABCF1-207ENST00000542772 UACAQ9BZF9 1416 aa9.35□□□□□ -0.91
ABCF1-207ENST00000542772 ABCA8O94911 1581 aa9.34□□□□□ -0.91
ABCF1-207ENST00000542772 PLB1Q6P1J6 1458 aa9.33□□□□□ -0.92
ABCF1-207ENST00000542772 CASKIN1Q8WXD9 1431 aa9.32□□□□□ -0.92
ABCF1-207ENST00000542772 TTBK1Q5TCY1 1321 aaPredicted RBP9.31□□□□□ -0.92
ABCF1-207ENST00000542772 VPS8Q8N3P4 1428 aa9.31□□□□□ -0.92
ABCF1-207ENST00000542772 ABCC2Q92887 1545 aa9.31□□□□□ -0.92
ABCF1-207ENST00000542772 RAPGEF6Q8TEU7 1601 aa9.3□□□□□ -0.92
ABCF1-207ENST00000542772 KDM5BQ9UGL1 1544 aa9.3□□□□□ -0.92
ABCF1-207ENST00000542772 ATP10BO94823 1461 aa9.29□□□□□ -0.92
ABCF1-207ENST00000542772 ADCY10Q96PN6 1610 aa9.29□□□□□ -0.92
ABCF1-207ENST00000542772 NUP153P49790 1475 aaKnown RBP9.28□□□□□ -0.92
ABCF1-207ENST00000542772 NPM1P06748 294 aaKnown RBP eCLIP9.28□□□□□ -0.92
ABCF1-207ENST00000542772 FYCO1Q9BQS8 1478 aa9.28□□□□□ -0.92
ABCF1-207ENST00000542772 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
ABCF1-207ENST00000542772 MAP3K1Q13233 1512 aa9.26□□□□□ -0.93
ABCF1-207ENST00000542772 HECW1Q76N89 1606 aa9.25□□□□□ -0.93
ABCF1-207ENST00000542772 ATP1B4Q9UN42 357 aaPredicted RBP9.25□□□□□ -0.93
ABCF1-207ENST00000542772 LRRIQ1Q96JM4 1722 aa9.25□□□□□ -0.93
ABCF1-207ENST00000542772 PCF11O94913 1555 aaKnown RBP9.24□□□□□ -0.93
ABCF1-207ENST00000542772 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
ABCF1-207ENST00000542772 CDK11AQ9UQ88 783 aaPredicted RBP9.24□□□□□ -0.93
ABCF1-207ENST00000542772 CCDC18Q5T9S5 1454 aa9.23□□□□□ -0.93
ABCF1-207ENST00000542772 ZCCHC11Q5TAX3 1644 aaKnown RBP9.23□□□□□ -0.93
ABCF1-207ENST00000542772 MAPKBP1O60336 1514 aa9.22□□□□□ -0.93
ABCF1-207ENST00000542772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.21□□□□□ -0.94
ABCF1-207ENST00000542772 HNRNPUL2Q1KMD3 747 aaKnown RBP9.21□□□□□ -0.94
ABCF1-207ENST00000542772 CDK13Q14004 1512 aaKnown RBP9.21□□□□□ -0.94
ABCF1-207ENST00000542772 ARID3CA6NKF2 412 aa9.2□□□□□ -0.94
ABCF1-207ENST00000542772 APLP2Q06481 763 aa9.2□□□□□ -0.94
ABCF1-207ENST00000542772 KANK4Q5T7N3 995 aaPredicted RBP9.2□□□□□ -0.94
ABCF1-207ENST00000542772 ASXL2Q76L83 1435 aa9.2□□□□□ -0.94
ABCF1-207ENST00000542772 TIAM1Q13009 1591 aa9.19□□□□□ -0.94
ABCF1-207ENST00000542772 TROQ12816 1431 aaPredicted RBP9.18□□□□□ -0.94
ABCF1-207ENST00000542772 LRRC9Q6ZRR7 1453 aa9.18□□□□□ -0.94
ABCF1-207ENST00000542772 MAGI3Q5TCQ9 1506 aa9.17□□□□□ -0.94
ABCF1-207ENST00000542772 ABCC10Q5T3U5 1492 aa9.17□□□□□ -0.94
ABCF1-207ENST00000542772 WDR7Q9Y4E6 1490 aa9.17□□□□□ -0.94
ABCF1-207ENST00000542772 CFAP43Q8NDM7 1665 aa9.16□□□□□ -0.94
ABCF1-207ENST00000542772 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
ABCF1-207ENST00000542772 GLI2P10070 1586 aa9.16□□□□□ -0.94
ABCF1-207ENST00000542772 MTUS2Q5JR59 1369 aa9.15□□□□□ -0.94
ABCF1-207ENST00000542772 FAM69CQ0P6D2 419 aa9.14□□□□□ -0.95
ABCF1-207ENST00000542772 EHBP1L1Q8N3D4 1523 aa9.12□□□□□ -0.95
ABCF1-207ENST00000542772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.12□□□□□ -0.95
ABCF1-207ENST00000542772 ABCA9Q8IUA7 1624 aa9.12□□□□□ -0.95
ABCF1-207ENST00000542772 DIP2BQ9P265 1576 aa9.12□□□□□ -0.95
ABCF1-207ENST00000542772 KIF13AQ9H1H9 1805 aa9.11□□□□□ -0.95
ABCF1-207ENST00000542772 PLCH2O75038 1416 aa9.11□□□□□ -0.95
ABCF1-207ENST00000542772 NCOA2Q15596 1464 aa9.1□□□□□ -0.95
ABCF1-207ENST00000542772 CD109Q6YHK3 1445 aa9.1□□□□□ -0.95
ABCF1-207ENST00000542772 SUPT6HQ7KZ85 1726 aaKnown RBP9.1□□□□□ -0.95
ABCF1-207ENST00000542772 GPATCH8Q9UKJ3 1502 aaKnown RBP9.1□□□□□ -0.95
ABCF1-207ENST00000542772 KIF14Q15058 1648 aa9.09□□□□□ -0.95
ABCF1-207ENST00000542772 MAP3K4Q9Y6R4 1608 aa9.09□□□□□ -0.95
ABCF1-207ENST00000542772 TRHP20396 242 aaPredicted RBP9.08□□□□□ -0.96
ABCF1-207ENST00000542772 EFCAB2Q5VUJ9 269 aa9.08□□□□□ -0.96
ABCF1-207ENST00000542772 PPARGC1BQ86YN6 1023 aaKnown RBP9.08□□□□□ -0.96
ABCF1-207ENST00000542772 ARAP3Q8WWN8 1544 aa9.08□□□□□ -0.96
ABCF1-207ENST00000542772 PHLDB1Q86UU1 1377 aa9.07□□□□□ -0.96
ABCF1-207ENST00000542772 CCNB3Q8WWL7 1395 aa9.07□□□□□ -0.96
ABCF1-207ENST00000542772 MIA2Q96PC5 1412 aa9.06□□□□□ -0.96
ABCF1-207ENST00000542772 CDC42BPAQ5VT25 1732 aa9.06□□□□□ -0.96
ABCF1-207ENST00000542772 CDC42BPBQ9Y5S2 1711 aa9.06□□□□□ -0.96
ABCF1-207ENST00000542772 CFDP1Q9UEE9 299 aaPredicted RBP9.06□□□□□ -0.96
ABCF1-207ENST00000542772 TTC37Q6PGP7 1564 aa9.06□□□□□ -0.96
ABCF1-207ENST00000542772 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
ABCF1-207ENST00000542772 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms