RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
VTN-203ENST00000542029 KIAA0586Q9BVV6 1533 aa19.6■□□□□ 0.73
VTN-203ENST00000542029 CUL7Q14999 1698 aa19.56■□□□□ 0.72
VTN-203ENST00000542029 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
VTN-203ENST00000542029 NPM1P06748 294 aaKnown RBP eCLIP19.53■□□□□ 0.72
VTN-203ENST00000542029 CARMIL2Q6F5E8 1435 aa19.44■□□□□ 0.7
VTN-203ENST00000542029 PTPRGP23470 1445 aa19.42■□□□□ 0.7
VTN-203ENST00000542029 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
VTN-203ENST00000542029 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
VTN-203ENST00000542029 FAM69CQ0P6D2 419 aa19.37■□□□□ 0.69
VTN-203ENST00000542029 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
VTN-203ENST00000542029 ABCC10Q5T3U5 1492 aa19.35■□□□□ 0.69
VTN-203ENST00000542029 IQGAP2Q13576 1575 aa19.34■□□□□ 0.69
VTN-203ENST00000542029 TTBK1Q5TCY1 1321 aaPredicted RBP19.31■□□□□ 0.68
VTN-203ENST00000542029 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
VTN-203ENST00000542029 UGGT2Q9NYU1 1516 aa19.27■□□□□ 0.68
VTN-203ENST00000542029 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
VTN-203ENST00000542029 ABCC2Q92887 1545 aa19.25■□□□□ 0.67
VTN-203ENST00000542029 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
VTN-203ENST00000542029 UHRF1BP1LA0JNW5 1464 aa19.25■□□□□ 0.67
VTN-203ENST00000542029 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
VTN-203ENST00000542029 PLB1Q6P1J6 1458 aa19.21■□□□□ 0.67
VTN-203ENST00000542029 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
VTN-203ENST00000542029 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
VTN-203ENST00000542029 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
VTN-203ENST00000542029 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
VTN-203ENST00000542029 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
VTN-203ENST00000542029 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
VTN-203ENST00000542029 KIF13AQ9H1H9 1805 aa19.17■□□□□ 0.66
VTN-203ENST00000542029 KDM5BQ9UGL1 1544 aa19.15■□□□□ 0.66
VTN-203ENST00000542029 KIAA0556O60303 1618 aa19.14■□□□□ 0.65
VTN-203ENST00000542029 EEA1Q15075 1411 aa19.13■□□□□ 0.65
VTN-203ENST00000542029 GLI2P10070 1586 aa19.07■□□□□ 0.64
VTN-203ENST00000542029 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
VTN-203ENST00000542029 CTTNBP2Q8WZ74 1663 aa19.03■□□□□ 0.64
VTN-203ENST00000542029 WDR7Q9Y4E6 1490 aa19.01■□□□□ 0.63
VTN-203ENST00000542029 KDM6BO15054 1643 aa19■□□□□ 0.63
VTN-203ENST00000542029 ABCA8O94911 1581 aa18.98■□□□□ 0.63
VTN-203ENST00000542029 TEX14Q8IWB6 1497 aa18.98■□□□□ 0.63
VTN-203ENST00000542029 P3H3Q8IVL6 736 aa18.98■□□□□ 0.63
VTN-203ENST00000542029 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
VTN-203ENST00000542029 KCNH8Q96L42 1107 aa18.94■□□□□ 0.62
VTN-203ENST00000542029 TSPOAP1O95153 1857 aa18.92■□□□□ 0.62
VTN-203ENST00000542029 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
VTN-203ENST00000542029 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
VTN-203ENST00000542029 ATP10BO94823 1461 aa18.88■□□□□ 0.61
VTN-203ENST00000542029 MAP3K4Q9Y6R4 1608 aa18.88■□□□□ 0.61
VTN-203ENST00000542029 ARID3CA6NKF2 412 aa18.87■□□□□ 0.61
VTN-203ENST00000542029 MAGI3Q5TCQ9 1506 aa18.87■□□□□ 0.61
VTN-203ENST00000542029 SAMD9Q5K651 1589 aa18.86■□□□□ 0.61
VTN-203ENST00000542029 COL17A1Q9UMD9 1497 aaPredicted RBP18.86■□□□□ 0.61
VTN-203ENST00000542029 RANGAP1P46060 587 aaPredicted RBP18.86■□□□□ 0.61
VTN-203ENST00000542029 PPRC1Q5VV67 1664 aaKnown RBP18.85■□□□□ 0.61
VTN-203ENST00000542029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
VTN-203ENST00000542029 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
VTN-203ENST00000542029 KDM4FA0A1W2PPD8 638 aa18.84■□□□□ 0.61
VTN-203ENST00000542029 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
VTN-203ENST00000542029 KIF21BO75037 1637 aa18.82■□□□□ 0.6
VTN-203ENST00000542029 FHOD3Q2V2M9 1422 aa18.81■□□□□ 0.6
VTN-203ENST00000542029 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
VTN-203ENST00000542029 PLEKHD1A6NEE1 506 aa18.79■□□□□ 0.6
VTN-203ENST00000542029 EFCAB5A4FU69 1503 aa18.79■□□□□ 0.6
VTN-203ENST00000542029 CFAP43Q8NDM7 1665 aa18.77■□□□□ 0.6
VTN-203ENST00000542029 RAPGEF6Q8TEU7 1601 aa18.77■□□□□ 0.6
VTN-203ENST00000542029 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.59
VTN-203ENST00000542029 ARAP3Q8WWN8 1544 aa18.71■□□□□ 0.59
VTN-203ENST00000542029 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
VTN-203ENST00000542029 FMN1Q68DA7 1419 aa18.69■□□□□ 0.58
VTN-203ENST00000542029 NEO1Q92859 1461 aa18.69■□□□□ 0.58
VTN-203ENST00000542029 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
VTN-203ENST00000542029 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
VTN-203ENST00000542029 CDK11AQ9UQ88 783 aaPredicted RBP18.66■□□□□ 0.58
VTN-203ENST00000542029 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
VTN-203ENST00000542029 RAPGEF3O95398 923 aa18.62■□□□□ 0.57
VTN-203ENST00000542029 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
VTN-203ENST00000542029 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
VTN-203ENST00000542029 DENND4BO75064 1496 aaPredicted RBP18.56■□□□□ 0.56
VTN-203ENST00000542029 FANCAO15360 1455 aa18.55■□□□□ 0.56
VTN-203ENST00000542029 CDK13Q14004 1512 aaKnown RBP18.54■□□□□ 0.56
VTN-203ENST00000542029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
VTN-203ENST00000542029 HECW1Q76N89 1606 aa18.52■□□□□ 0.56
VTN-203ENST00000542029 PLCH2O75038 1416 aa18.52■□□□□ 0.56
VTN-203ENST00000542029 EFCAB2Q5VUJ9 269 aa18.52■□□□□ 0.56
VTN-203ENST00000542029 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
VTN-203ENST00000542029 CLIP1P30622 1438 aa18.49■□□□□ 0.55
VTN-203ENST00000542029 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
VTN-203ENST00000542029 CFAP74Q9C0B2 1584 aa18.47■□□□□ 0.55
VTN-203ENST00000542029 CASKIN1Q8WXD9 1431 aa18.47■□□□□ 0.55
VTN-203ENST00000542029 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
VTN-203ENST00000542029 TTC37Q6PGP7 1564 aa18.45■□□□□ 0.54
VTN-203ENST00000542029 MAGI2Q86UL8 1455 aa18.45■□□□□ 0.54
VTN-203ENST00000542029 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
VTN-203ENST00000542029 FRMPD1Q5SYB0 1578 aa18.43■□□□□ 0.54
VTN-203ENST00000542029 POGZQ7Z3K3 1410 aa18.41■□□□□ 0.54
VTN-203ENST00000542029 ZMYM4Q5VZL5 1548 aa18.39■□□□□ 0.54
VTN-203ENST00000542029 ARHGEF40Q8TER5 1519 aa18.39■□□□□ 0.53
VTN-203ENST00000542029 KIF14Q15058 1648 aa18.38■□□□□ 0.53
VTN-203ENST00000542029 PTPRMP28827 1452 aa18.37■□□□□ 0.53
VTN-203ENST00000542029 FYCO1Q9BQS8 1478 aa18.37■□□□□ 0.53
VTN-203ENST00000542029 ZFYVE16Q7Z3T8 1539 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms