RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 IGF1RP08069 1367 aa24.79■■□□□ 1.56
COPS7A-212ENST00000541866 ILDR1Q86SU0 546 aaPredicted RBP24.78■■□□□ 1.56
COPS7A-212ENST00000541866 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
COPS7A-212ENST00000541866 NPM1P06748 294 aaKnown RBP eCLIP24.67■■□□□ 1.54
COPS7A-212ENST00000541866 KIAA0586Q9BVV6 1533 aa24.65■■□□□ 1.54
COPS7A-212ENST00000541866 CUL7Q14999 1698 aa24.64■■□□□ 1.53
COPS7A-212ENST00000541866 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.53
COPS7A-212ENST00000541866 TTBK1Q5TCY1 1321 aaPredicted RBP24.51■■□□□ 1.51
COPS7A-212ENST00000541866 FAM69CQ0P6D2 419 aa24.5■■□□□ 1.51
COPS7A-212ENST00000541866 PTPRGP23470 1445 aa24.47■■□□□ 1.51
COPS7A-212ENST00000541866 CARMIL2Q6F5E8 1435 aa24.46■■□□□ 1.51
COPS7A-212ENST00000541866 ADCY10Q96PN6 1610 aa24.42■■□□□ 1.5
COPS7A-212ENST00000541866 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
COPS7A-212ENST00000541866 ABCC10Q5T3U5 1492 aa24.41■■□□□ 1.5
COPS7A-212ENST00000541866 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
COPS7A-212ENST00000541866 KIF13AQ9H1H9 1805 aa24.4■■□□□ 1.5
COPS7A-212ENST00000541866 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
COPS7A-212ENST00000541866 IQGAP2Q13576 1575 aa24.37■■□□□ 1.49
COPS7A-212ENST00000541866 DIP2BQ9P265 1576 aa24.29■■□□□ 1.48
COPS7A-212ENST00000541866 ABCC2Q92887 1545 aa24.25■■□□□ 1.47
COPS7A-212ENST00000541866 DISP1Q96F81 1524 aa24.25■■□□□ 1.47
COPS7A-212ENST00000541866 UACAQ9BZF9 1416 aa24.25■■□□□ 1.47
COPS7A-212ENST00000541866 UGGT2Q9NYU1 1516 aa24.23■■□□□ 1.47
COPS7A-212ENST00000541866 UHRF1BP1LA0JNW5 1464 aa24.21■■□□□ 1.47
COPS7A-212ENST00000541866 PLB1Q6P1J6 1458 aa24.19■■□□□ 1.46
COPS7A-212ENST00000541866 ASXL2Q76L83 1435 aa24.18■■□□□ 1.46
COPS7A-212ENST00000541866 TSPOAP1O95153 1857 aa24.15■■□□□ 1.46
COPS7A-212ENST00000541866 KIAA0556O60303 1618 aa24.13■■□□□ 1.45
COPS7A-212ENST00000541866 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
COPS7A-212ENST00000541866 KDM6BO15054 1643 aa24.11■■□□□ 1.45
COPS7A-212ENST00000541866 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
COPS7A-212ENST00000541866 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
COPS7A-212ENST00000541866 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
COPS7A-212ENST00000541866 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
COPS7A-212ENST00000541866 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
COPS7A-212ENST00000541866 GLI2P10070 1586 aa24.06■■□□□ 1.44
COPS7A-212ENST00000541866 EPRSP07814 1512 aaKnown RBP24.02■■□□□ 1.44
COPS7A-212ENST00000541866 ZCCHC11Q5TAX3 1644 aaKnown RBP24.01■■□□□ 1.43
COPS7A-212ENST00000541866 P3H3Q8IVL6 736 aa23.99■■□□□ 1.43
COPS7A-212ENST00000541866 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
COPS7A-212ENST00000541866 WDR7Q9Y4E6 1490 aa23.94■■□□□ 1.42
COPS7A-212ENST00000541866 TEX14Q8IWB6 1497 aa23.94■■□□□ 1.42
COPS7A-212ENST00000541866 ABCA8O94911 1581 aa23.92■■□□□ 1.42
COPS7A-212ENST00000541866 PPRC1Q5VV67 1664 aaKnown RBP23.92■■□□□ 1.42
COPS7A-212ENST00000541866 KDM4FA0A1W2PPD8 638 aa23.91■■□□□ 1.42
COPS7A-212ENST00000541866 ARID3CA6NKF2 412 aa23.9■■□□□ 1.42
COPS7A-212ENST00000541866 EEA1Q15075 1411 aa23.9■■□□□ 1.42
COPS7A-212ENST00000541866 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.42
COPS7A-212ENST00000541866 RANGAP1P46060 587 aaPredicted RBP23.88■■□□□ 1.41
COPS7A-212ENST00000541866 CD109Q6YHK3 1445 aa23.85■■□□□ 1.41
COPS7A-212ENST00000541866 COL17A1Q9UMD9 1497 aaPredicted RBP23.84■■□□□ 1.41
COPS7A-212ENST00000541866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.81■■□□□ 1.4
COPS7A-212ENST00000541866 HNRNPUL2Q1KMD3 747 aaKnown RBP23.81■■□□□ 1.4
COPS7A-212ENST00000541866 ATP10BO94823 1461 aa23.79■■□□□ 1.4
COPS7A-212ENST00000541866 MAGI3Q5TCQ9 1506 aa23.77■■□□□ 1.4
COPS7A-212ENST00000541866 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
COPS7A-212ENST00000541866 CFAP43Q8NDM7 1665 aa23.74■■□□□ 1.39
COPS7A-212ENST00000541866 RAPGEF6Q8TEU7 1601 aa23.69■■□□□ 1.38
COPS7A-212ENST00000541866 ADGRL1O94910 1474 aa23.68■■□□□ 1.38
COPS7A-212ENST00000541866 FHOD3Q2V2M9 1422 aa23.68■■□□□ 1.38
COPS7A-212ENST00000541866 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
COPS7A-212ENST00000541866 UBTFP17480 764 aaKnown RBP23.66■■□□□ 1.38
COPS7A-212ENST00000541866 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
COPS7A-212ENST00000541866 PLEKHD1A6NEE1 506 aa23.64■■□□□ 1.37
COPS7A-212ENST00000541866 KIF21BO75037 1637 aa23.62■■□□□ 1.37
COPS7A-212ENST00000541866 PHLDB1Q86UU1 1377 aa23.61■■□□□ 1.37
COPS7A-212ENST00000541866 NUP153P49790 1475 aaKnown RBP23.61■■□□□ 1.37
COPS7A-212ENST00000541866 HECW2Q9P2P5 1572 aa23.59■■□□□ 1.37
COPS7A-212ENST00000541866 FBXO41Q8TF61 875 aa23.58■■□□□ 1.37
COPS7A-212ENST00000541866 ABCA9Q8IUA7 1624 aa23.58■■□□□ 1.36
COPS7A-212ENST00000541866 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.36
COPS7A-212ENST00000541866 ARAP3Q8WWN8 1544 aa23.58■■□□□ 1.36
COPS7A-212ENST00000541866 RAPGEF3O95398 923 aa23.54■■□□□ 1.36
COPS7A-212ENST00000541866 ATP1B4Q9UN42 357 aaPredicted RBP23.54■■□□□ 1.36
COPS7A-212ENST00000541866 NEO1Q92859 1461 aa23.51■■□□□ 1.35
COPS7A-212ENST00000541866 LMTK3Q96Q04 1460 aa23.51■■□□□ 1.35
COPS7A-212ENST00000541866 FMN1Q68DA7 1419 aa23.43■■□□□ 1.34
COPS7A-212ENST00000541866 ARID4BQ4LE39 1312 aaPredicted RBP23.41■■□□□ 1.34
COPS7A-212ENST00000541866 CDK11AQ9UQ88 783 aaPredicted RBP23.41■■□□□ 1.34
COPS7A-212ENST00000541866 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
COPS7A-212ENST00000541866 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
COPS7A-212ENST00000541866 FANCAO15360 1455 aa23.38■■□□□ 1.33
COPS7A-212ENST00000541866 DENND4BO75064 1496 aaPredicted RBP23.38■■□□□ 1.33
COPS7A-212ENST00000541866 ARHGAP35Q9NRY4 1499 aa23.38■■□□□ 1.33
COPS7A-212ENST00000541866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.38■■□□□ 1.33
COPS7A-212ENST00000541866 HECW1Q76N89 1606 aa23.32■■□□□ 1.32
COPS7A-212ENST00000541866 CFAP74Q9C0B2 1584 aa23.31■■□□□ 1.32
COPS7A-212ENST00000541866 SOCS7O14512 581 aa23.31■■□□□ 1.32
COPS7A-212ENST00000541866 TTC37Q6PGP7 1564 aa23.31■■□□□ 1.32
COPS7A-212ENST00000541866 PLCH2O75038 1416 aa23.3■■□□□ 1.32
COPS7A-212ENST00000541866 FRMPD1Q5SYB0 1578 aa23.3■■□□□ 1.32
COPS7A-212ENST00000541866 EFCAB2Q5VUJ9 269 aa23.29■■□□□ 1.32
COPS7A-212ENST00000541866 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
COPS7A-212ENST00000541866 CLIP1P30622 1438 aa23.24■■□□□ 1.31
COPS7A-212ENST00000541866 PTPRMP28827 1452 aa23.24■■□□□ 1.31
COPS7A-212ENST00000541866 RICTORQ6R327 1708 aa23.23■■□□□ 1.31
COPS7A-212ENST00000541866 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
COPS7A-212ENST00000541866 ADAMTSL3P82987 1691 aa23.22■■□□□ 1.31
COPS7A-212ENST00000541866 ARHGEF40Q8TER5 1519 aa23.21■■□□□ 1.31
COPS7A-212ENST00000541866 POGZQ7Z3K3 1410 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms