RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
AC005840.4-201ENST00000541242 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
AC005840.4-201ENST00000541242 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
AC005840.4-201ENST00000541242 KANK4Q5T7N3 995 aaPredicted RBP21.4■■□□□ 1.02
AC005840.4-201ENST00000541242 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
AC005840.4-201ENST00000541242 LAMC3Q9Y6N6 1575 aa21.36■■□□□ 1.01
AC005840.4-201ENST00000541242 FKBP8Q14318 412 aa21.34■■□□□ 1.01
AC005840.4-201ENST00000541242 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
AC005840.4-201ENST00000541242 URB2Q14146 1524 aaKnown RBP21.32■■□□□ 1
AC005840.4-201ENST00000541242 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
AC005840.4-201ENST00000541242 RBM19Q9Y4C8 960 aaKnown RBP21.24■□□□□ 0.99
AC005840.4-201ENST00000541242 ITGAEP38570 1179 aa21.2■□□□□ 0.98
AC005840.4-201ENST00000541242 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
AC005840.4-201ENST00000541242 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
AC005840.4-201ENST00000541242 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
AC005840.4-201ENST00000541242 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
AC005840.4-201ENST00000541242 RRBP1Q9P2E9 1410 aaKnown RBP21.17■□□□□ 0.98
AC005840.4-201ENST00000541242 CUL7Q14999 1698 aa21.15■□□□□ 0.98
AC005840.4-201ENST00000541242 DDX10Q13206 875 aaKnown RBP21.15■□□□□ 0.98
AC005840.4-201ENST00000541242 TIAM1Q13009 1591 aa21.13■□□□□ 0.97
AC005840.4-201ENST00000541242 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
AC005840.4-201ENST00000541242 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
AC005840.4-201ENST00000541242 FHOD3Q2V2M9 1422 aa21.1■□□□□ 0.97
AC005840.4-201ENST00000541242 MSH5O43196 834 aa21.1■□□□□ 0.97
AC005840.4-201ENST00000541242 TRIM52Q96A61 297 aa21.1■□□□□ 0.97
AC005840.4-201ENST00000541242 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
AC005840.4-201ENST00000541242 CCNB3Q8WWL7 1395 aa21.09■□□□□ 0.97
AC005840.4-201ENST00000541242 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
AC005840.4-201ENST00000541242 NEFLP07196 543 aa21.07■□□□□ 0.96
AC005840.4-201ENST00000541242 PCF11O94913 1555 aaKnown RBP21.07■□□□□ 0.96
AC005840.4-201ENST00000541242 CTTNBP2Q8WZ74 1663 aa21.07■□□□□ 0.96
AC005840.4-201ENST00000541242 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
AC005840.4-201ENST00000541242 LRRC9Q6ZRR7 1453 aa21.05■□□□□ 0.96
AC005840.4-201ENST00000541242 HIRIP3Q9BW71 556 aaPredicted RBP21.03■□□□□ 0.96
AC005840.4-201ENST00000541242 ATP1B4Q9UN42 357 aaPredicted RBP21.03■□□□□ 0.96
AC005840.4-201ENST00000541242 TARBP1Q13395 1621 aaKnown RBP21.03■□□□□ 0.96
AC005840.4-201ENST00000541242 MAPKBP1O60336 1514 aa21.02■□□□□ 0.96
AC005840.4-201ENST00000541242 EFCAB5A4FU69 1503 aa21.01■□□□□ 0.95
AC005840.4-201ENST00000541242 CFAP43Q8NDM7 1665 aa20.99■□□□□ 0.95
AC005840.4-201ENST00000541242 RAB3GAP2Q9H2M9 1393 aa20.99■□□□□ 0.95
AC005840.4-201ENST00000541242 PHLDB1Q86UU1 1377 aa20.98■□□□□ 0.95
AC005840.4-201ENST00000541242 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
AC005840.4-201ENST00000541242 SIN3AQ96ST3 1273 aa20.98■□□□□ 0.95
AC005840.4-201ENST00000541242 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
AC005840.4-201ENST00000541242 CASKIN1Q8WXD9 1431 aa20.95■□□□□ 0.94
AC005840.4-201ENST00000541242 PPP1R15AO75807 674 aaPredicted RBP20.94■□□□□ 0.94
AC005840.4-201ENST00000541242 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.94
AC005840.4-201ENST00000541242 SAMD9Q5K651 1589 aa20.89■□□□□ 0.94
AC005840.4-201ENST00000541242 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.93
AC005840.4-201ENST00000541242 IRX6P78412 446 aaPredicted RBP20.88■□□□□ 0.93
AC005840.4-201ENST00000541242 FMN1Q68DA7 1419 aa20.88■□□□□ 0.93
AC005840.4-201ENST00000541242 PBRM1Q86U86 1689 aa20.87■□□□□ 0.93
AC005840.4-201ENST00000541242 FAM50AQ14320 339 aaKnown RBP20.86■□□□□ 0.93
AC005840.4-201ENST00000541242 PRKCSHP14314 528 aaPredicted RBP20.85■□□□□ 0.93
AC005840.4-201ENST00000541242 ANP32CO43423 234 aa20.85■□□□□ 0.93
AC005840.4-201ENST00000541242 WDR62O43379 1518 aa20.84■□□□□ 0.93
AC005840.4-201ENST00000541242 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.93
AC005840.4-201ENST00000541242 CCER2I3L3R5 266 aa20.82■□□□□ 0.92
AC005840.4-201ENST00000541242 ERICH6Q7L0X2 663 aa20.82■□□□□ 0.92
AC005840.4-201ENST00000541242 LRRIQ1Q96JM4 1722 aa20.82■□□□□ 0.92
AC005840.4-201ENST00000541242 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
AC005840.4-201ENST00000541242 SETD5Q9C0A6 1442 aa20.79■□□□□ 0.92
AC005840.4-201ENST00000541242 FANCIQ9NVI1 1328 aa20.79■□□□□ 0.92
AC005840.4-201ENST00000541242 ADAMTS12P58397 1594 aa20.78■□□□□ 0.92
AC005840.4-201ENST00000541242 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
AC005840.4-201ENST00000541242 CDK11AQ9UQ88 783 aaPredicted RBP20.75■□□□□ 0.91
AC005840.4-201ENST00000541242 MTUS2Q5JR59 1369 aa20.75■□□□□ 0.91
AC005840.4-201ENST00000541242 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
AC005840.4-201ENST00000541242 IQGAP2Q13576 1575 aa20.72■□□□□ 0.91
AC005840.4-201ENST00000541242 FGD6Q6ZV73 1430 aa20.71■□□□□ 0.91
AC005840.4-201ENST00000541242 HNRNPUQ00839 825 aaKnown RBP eCLIP20.7■□□□□ 0.9
AC005840.4-201ENST00000541242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.69■□□□□ 0.9
AC005840.4-201ENST00000541242 NCOA2Q15596 1464 aa20.66■□□□□ 0.9
AC005840.4-201ENST00000541242 MAGI3Q5TCQ9 1506 aa20.66■□□□□ 0.9
AC005840.4-201ENST00000541242 DEKP35659 375 aaKnown RBP20.64■□□□□ 0.89
AC005840.4-201ENST00000541242 PTPRKQ15262 1439 aa20.63■□□□□ 0.89
AC005840.4-201ENST00000541242 EIF4G3O43432 1585 aaKnown RBP20.61■□□□□ 0.89
AC005840.4-201ENST00000541242 EHBP1L1Q8N3D4 1523 aa20.61■□□□□ 0.89
AC005840.4-201ENST00000541242 MYOM3Q5VTT5 1437 aa20.6■□□□□ 0.89
AC005840.4-201ENST00000541242 SUPT6HQ7KZ85 1726 aaKnown RBP20.6■□□□□ 0.89
AC005840.4-201ENST00000541242 UGGT2Q9NYU1 1516 aa20.6■□□□□ 0.89
AC005840.4-201ENST00000541242 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
AC005840.4-201ENST00000541242 TIMELESSQ9UNS1 1208 aa20.58■□□□□ 0.89
AC005840.4-201ENST00000541242 HECW1Q76N89 1606 aa20.58■□□□□ 0.88
AC005840.4-201ENST00000541242 CCDC18Q5T9S5 1454 aa20.58■□□□□ 0.88
AC005840.4-201ENST00000541242 EPRSP07814 1512 aaKnown RBP20.57■□□□□ 0.88
AC005840.4-201ENST00000541242 ARHGEF11O15085 1522 aa20.57■□□□□ 0.88
AC005840.4-201ENST00000541242 CDK13Q14004 1512 aaKnown RBP20.57■□□□□ 0.88
AC005840.4-201ENST00000541242 KIAA0586Q9BVV6 1533 aa20.56■□□□□ 0.88
AC005840.4-201ENST00000541242 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
AC005840.4-201ENST00000541242 DISP1Q96F81 1524 aa20.54■□□□□ 0.88
AC005840.4-201ENST00000541242 TONSLQ96HA7 1378 aa20.54■□□□□ 0.88
AC005840.4-201ENST00000541242 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
AC005840.4-201ENST00000541242 NBR1Q14596 966 aa20.52■□□□□ 0.88
AC005840.4-201ENST00000541242 PTPN23Q9H3S7 1636 aa20.52■□□□□ 0.87
AC005840.4-201ENST00000541242 PPP4R2Q9NY27 417 aa20.51■□□□□ 0.87
AC005840.4-201ENST00000541242 KIAA0556O60303 1618 aa20.5■□□□□ 0.87
AC005840.4-201ENST00000541242 HFM1A2PYH4 1435 aa20.5■□□□□ 0.87
AC005840.4-201ENST00000541242 CCDC184Q52MB2 194 aa20.49■□□□□ 0.87
AC005840.4-201ENST00000541242 NAIPQ13075 1403 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms