RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
KPNB1-203ENST00000540627 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
KPNB1-203ENST00000540627 PRXQ9BXM0 1461 aa10.72□□□□□ -0.69
KPNB1-203ENST00000540627 HMGXB3Q12766 1538 aa10.71□□□□□ -0.7
KPNB1-203ENST00000540627 NCAPD3P42695 1498 aa10.7□□□□□ -0.7
KPNB1-203ENST00000540627 HOMEZQ8IX15 550 aa10.69□□□□□ -0.7
KPNB1-203ENST00000540627 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
KPNB1-203ENST00000540627 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
KPNB1-203ENST00000540627 MIER1Q8N108 512 aa10.67□□□□□ -0.7
KPNB1-203ENST00000540627 YTHDC1Q96MU7 727 aaKnown RBP10.67□□□□□ -0.7
KPNB1-203ENST00000540627 CUX1P39880 1505 aa10.67□□□□□ -0.7
KPNB1-203ENST00000540627 CLSPNQ9HAW4 1339 aa10.66□□□□□ -0.7
KPNB1-203ENST00000540627 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
KPNB1-203ENST00000540627 CFTRP13569 1480 aa10.64□□□□□ -0.71
KPNB1-203ENST00000540627 KANK4Q5T7N3 995 aaPredicted RBP10.63□□□□□ -0.71
KPNB1-203ENST00000540627 CUX2O14529 1486 aa10.63□□□□□ -0.71
KPNB1-203ENST00000540627 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
KPNB1-203ENST00000540627 DHX57Q6P158 1386 aaKnown RBP10.62□□□□□ -0.71
KPNB1-203ENST00000540627 FBLN2P98095 1184 aa10.61□□□□□ -0.71
KPNB1-203ENST00000540627 RRBP1Q9P2E9 1410 aaKnown RBP10.6□□□□□ -0.71
KPNB1-203ENST00000540627 CNKSR2Q8WXI2 1034 aa10.58□□□□□ -0.72
KPNB1-203ENST00000540627 ARHGAP35Q9NRY4 1499 aa10.58□□□□□ -0.72
KPNB1-203ENST00000540627 CCNB3Q8WWL7 1395 aa10.57□□□□□ -0.72
KPNB1-203ENST00000540627 PRDM2Q13029 1718 aa10.54□□□□□ -0.72
KPNB1-203ENST00000540627 IGF1RP08069 1367 aa10.54□□□□□ -0.72
KPNB1-203ENST00000540627 ITGAEP38570 1179 aa10.53□□□□□ -0.72
KPNB1-203ENST00000540627 CADPSQ9ULU8 1353 aa10.52□□□□□ -0.73
KPNB1-203ENST00000540627 CARMIL1Q5VZK9 1371 aa10.51□□□□□ -0.73
KPNB1-203ENST00000540627 MAP3K1Q13233 1512 aa10.49□□□□□ -0.73
KPNB1-203ENST00000540627 TIAM1Q13009 1591 aa10.48□□□□□ -0.73
KPNB1-203ENST00000540627 FGD5Q6ZNL6 1462 aa10.48□□□□□ -0.73
KPNB1-203ENST00000540627 PIAS4Q8N2W9 510 aaPredicted RBP10.47□□□□□ -0.73
KPNB1-203ENST00000540627 RAB3GAP2Q9H2M9 1393 aa10.47□□□□□ -0.73
KPNB1-203ENST00000540627 TMEM132AQ24JP5 1023 aa10.46□□□□□ -0.73
KPNB1-203ENST00000540627 FHAD1B1AJZ9 1412 aa10.46□□□□□ -0.74
KPNB1-203ENST00000540627 PODXL2Q9NZ53 605 aa10.45□□□□□ -0.74
KPNB1-203ENST00000540627 LRRC9Q6ZRR7 1453 aa10.45□□□□□ -0.74
KPNB1-203ENST00000540627 SETD5Q9C0A6 1442 aa10.43□□□□□ -0.74
KPNB1-203ENST00000540627 FAM50AQ14320 339 aaKnown RBP10.42□□□□□ -0.74
KPNB1-203ENST00000540627 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
KPNB1-203ENST00000540627 ERICH6Q7L0X2 663 aa10.41□□□□□ -0.74
KPNB1-203ENST00000540627 ATP1B4Q9UN42 357 aaPredicted RBP10.41□□□□□ -0.74
KPNB1-203ENST00000540627 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
KPNB1-203ENST00000540627 MAPKBP1O60336 1514 aa10.41□□□□□ -0.74
KPNB1-203ENST00000540627 C14orf37Q86TY3 774 aa10.41□□□□□ -0.74
KPNB1-203ENST00000540627 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
KPNB1-203ENST00000540627 CFAP43Q8NDM7 1665 aa10.39□□□□□ -0.75
KPNB1-203ENST00000540627 PCF11O94913 1555 aaKnown RBP10.38□□□□□ -0.75
KPNB1-203ENST00000540627 MYT1Q01538 1121 aa10.38□□□□□ -0.75
KPNB1-203ENST00000540627 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
KPNB1-203ENST00000540627 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
KPNB1-203ENST00000540627 FHOD3Q2V2M9 1422 aa10.36□□□□□ -0.75
KPNB1-203ENST00000540627 EFCAB5A4FU69 1503 aa10.36□□□□□ -0.75
KPNB1-203ENST00000540627 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
KPNB1-203ENST00000540627 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
KPNB1-203ENST00000540627 CASKIN1Q8WXD9 1431 aa10.35□□□□□ -0.75
KPNB1-203ENST00000540627 TOPBP1Q92547 1522 aa10.34□□□□□ -0.75
KPNB1-203ENST00000540627 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
KPNB1-203ENST00000540627 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
KPNB1-203ENST00000540627 SIN3AQ96ST3 1273 aa10.34□□□□□ -0.75
KPNB1-203ENST00000540627 SUPT16HQ9Y5B9 1047 aaKnown RBP10.34□□□□□ -0.75
KPNB1-203ENST00000540627 AQRO60306 1485 aaKnown RBP eCLIP10.34□□□□□ -0.758e-8■■■■■ 27.2
KPNB1-203ENST00000540627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.33□□□□□ -0.76
KPNB1-203ENST00000540627 CUL7Q14999 1698 aa10.33□□□□□ -0.76
KPNB1-203ENST00000540627 ATXN8OSP0DMR3 200 aa10.33□□□□□ -0.76
KPNB1-203ENST00000540627 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
KPNB1-203ENST00000540627 WDR97A6NE52 1622 aa10.32□□□□□ -0.76
KPNB1-203ENST00000540627 FMN1Q68DA7 1419 aa10.32□□□□□ -0.76
KPNB1-203ENST00000540627 DDX10Q13206 875 aaKnown RBP10.31□□□□□ -0.76
KPNB1-203ENST00000540627 CTTNBP2Q8WZ74 1663 aa10.3□□□□□ -0.76
KPNB1-203ENST00000540627 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
KPNB1-203ENST00000540627 MTUS2Q5JR59 1369 aa10.29□□□□□ -0.76
KPNB1-203ENST00000540627 FGD6Q6ZV73 1430 aa10.29□□□□□ -0.76
KPNB1-203ENST00000540627 NESP48681 1621 aa10.29□□□□□ -0.76
KPNB1-203ENST00000540627 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
KPNB1-203ENST00000540627 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
KPNB1-203ENST00000540627 PKD2Q13563 968 aa10.28□□□□□ -0.76
KPNB1-203ENST00000540627 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
KPNB1-203ENST00000540627 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
KPNB1-203ENST00000540627 SNAPC4Q5SXM2 1469 aa10.26□□□□□ -0.77
KPNB1-203ENST00000540627 TONSLQ96HA7 1378 aa10.25□□□□□ -0.77
KPNB1-203ENST00000540627 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
KPNB1-203ENST00000540627 NBR1Q14596 966 aa10.25□□□□□ -0.77
KPNB1-203ENST00000540627 CCDC18Q5T9S5 1454 aa10.25□□□□□ -0.77
KPNB1-203ENST00000540627 HFM1A2PYH4 1435 aa10.24□□□□□ -0.77
KPNB1-203ENST00000540627 TDRD9Q8NDG6 1382 aaKnown RBP10.24□□□□□ -0.77
KPNB1-203ENST00000540627 URB2Q14146 1524 aaKnown RBP10.24□□□□□ -0.77
KPNB1-203ENST00000540627 LAMC3Q9Y6N6 1575 aa10.23□□□□□ -0.77
KPNB1-203ENST00000540627 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
KPNB1-203ENST00000540627 HIRIP3Q9BW71 556 aaPredicted RBP10.23□□□□□ -0.77
KPNB1-203ENST00000540627 ANP32CO43423 234 aa10.23□□□□□ -0.77
KPNB1-203ENST00000540627 GAPVD1Q14C86 1478 aa10.22□□□□□ -0.77
KPNB1-203ENST00000540627 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
KPNB1-203ENST00000540627 MYOM3Q5VTT5 1437 aa10.22□□□□□ -0.77
KPNB1-203ENST00000540627 NCOA2Q15596 1464 aa10.22□□□□□ -0.77
KPNB1-203ENST00000540627 CCER2I3L3R5 266 aa10.22□□□□□ -0.77
KPNB1-203ENST00000540627 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
KPNB1-203ENST00000540627 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.77
KPNB1-203ENST00000540627 ABCA5Q8WWZ7 1642 aa10.21□□□□□ -0.77
KPNB1-203ENST00000540627 PTPRKQ15262 1439 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms