RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 PRG4Q92954 1404 aaPredicted RBP19.4■□□□□ 0.7
CYB561A3-215ENST00000540317 CUL7Q14999 1698 aa19.37■□□□□ 0.69
CYB561A3-215ENST00000540317 SHROOM2Q13796 1616 aa19.37■□□□□ 0.69
CYB561A3-215ENST00000540317 KIAA0586Q9BVV6 1533 aa19.33■□□□□ 0.68
CYB561A3-215ENST00000540317 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
CYB561A3-215ENST00000540317 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.67
CYB561A3-215ENST00000540317 TTBK1Q5TCY1 1321 aaPredicted RBP19.23■□□□□ 0.67
CYB561A3-215ENST00000540317 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
CYB561A3-215ENST00000540317 NPM1P06748 294 aaKnown RBP eCLIP19.22■□□□□ 0.67
CYB561A3-215ENST00000540317 CARMIL2Q6F5E8 1435 aa19.17■□□□□ 0.66
CYB561A3-215ENST00000540317 PTPRGP23470 1445 aa19.16■□□□□ 0.66
CYB561A3-215ENST00000540317 EEA1Q15075 1411 aa19.16■□□□□ 0.66
CYB561A3-215ENST00000540317 FAM9AQ8IZU1 332 aaPredicted RBP19.15■□□□□ 0.66
CYB561A3-215ENST00000540317 IQGAP2Q13576 1575 aa19.15■□□□□ 0.66
CYB561A3-215ENST00000540317 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
CYB561A3-215ENST00000540317 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
CYB561A3-215ENST00000540317 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
CYB561A3-215ENST00000540317 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
CYB561A3-215ENST00000540317 ADCY10Q96PN6 1610 aa19.05■□□□□ 0.64
CYB561A3-215ENST00000540317 DISP1Q96F81 1524 aa19.05■□□□□ 0.64
CYB561A3-215ENST00000540317 UGGT2Q9NYU1 1516 aa19.03■□□□□ 0.64
CYB561A3-215ENST00000540317 MAPKBP1O60336 1514 aa18.98■□□□□ 0.63
CYB561A3-215ENST00000540317 UACAQ9BZF9 1416 aa18.98■□□□□ 0.63
CYB561A3-215ENST00000540317 ABCC10Q5T3U5 1492 aa18.98■□□□□ 0.63
CYB561A3-215ENST00000540317 ABCC2Q92887 1545 aa18.96■□□□□ 0.63
CYB561A3-215ENST00000540317 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
CYB561A3-215ENST00000540317 KIAA0556O60303 1618 aa18.95■□□□□ 0.62
CYB561A3-215ENST00000540317 GOLGA3Q08378 1498 aa18.95■□□□□ 0.62
CYB561A3-215ENST00000540317 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
CYB561A3-215ENST00000540317 KIF13AQ9H1H9 1805 aa18.93■□□□□ 0.62
CYB561A3-215ENST00000540317 UHRF1BP1LA0JNW5 1464 aa18.93■□□□□ 0.62
CYB561A3-215ENST00000540317 RANGAP1P46060 587 aaPredicted RBP18.91■□□□□ 0.62
CYB561A3-215ENST00000540317 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
CYB561A3-215ENST00000540317 DIP2BQ9P265 1576 aa18.89■□□□□ 0.61
CYB561A3-215ENST00000540317 PLB1Q6P1J6 1458 aa18.87■□□□□ 0.61
CYB561A3-215ENST00000540317 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
CYB561A3-215ENST00000540317 KDM5BQ9UGL1 1544 aa18.85■□□□□ 0.61
CYB561A3-215ENST00000540317 KIF21BO75037 1637 aa18.81■□□□□ 0.6
CYB561A3-215ENST00000540317 UBTFP17480 764 aaKnown RBP18.81■□□□□ 0.6
CYB561A3-215ENST00000540317 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
CYB561A3-215ENST00000540317 ZCCHC11Q5TAX3 1644 aaKnown RBP18.78■□□□□ 0.6
CYB561A3-215ENST00000540317 KCNH8Q96L42 1107 aa18.78■□□□□ 0.6
CYB561A3-215ENST00000540317 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
CYB561A3-215ENST00000540317 ABCA8O94911 1581 aa18.76■□□□□ 0.59
CYB561A3-215ENST00000540317 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
CYB561A3-215ENST00000540317 WDR7Q9Y4E6 1490 aa18.73■□□□□ 0.59
CYB561A3-215ENST00000540317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
CYB561A3-215ENST00000540317 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
CYB561A3-215ENST00000540317 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
CYB561A3-215ENST00000540317 GLI2P10070 1586 aa18.73■□□□□ 0.59
CYB561A3-215ENST00000540317 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
CYB561A3-215ENST00000540317 SAMD9Q5K651 1589 aa18.72■□□□□ 0.59
CYB561A3-215ENST00000540317 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
CYB561A3-215ENST00000540317 FHOD3Q2V2M9 1422 aa18.69■□□□□ 0.58
CYB561A3-215ENST00000540317 KDM6BO15054 1643 aa18.69■□□□□ 0.58
CYB561A3-215ENST00000540317 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
CYB561A3-215ENST00000540317 ATP10BO94823 1461 aa18.68■□□□□ 0.58
CYB561A3-215ENST00000540317 CD109Q6YHK3 1445 aa18.64■□□□□ 0.57
CYB561A3-215ENST00000540317 TEX14Q8IWB6 1497 aa18.63■□□□□ 0.57
CYB561A3-215ENST00000540317 RAPGEF6Q8TEU7 1601 aa18.62■□□□□ 0.57
CYB561A3-215ENST00000540317 MAP3K4Q9Y6R4 1608 aa18.62■□□□□ 0.57
CYB561A3-215ENST00000540317 EFCAB5A4FU69 1503 aa18.61■□□□□ 0.57
CYB561A3-215ENST00000540317 PPRC1Q5VV67 1664 aaKnown RBP18.61■□□□□ 0.57
CYB561A3-215ENST00000540317 ATP1B4Q9UN42 357 aaPredicted RBP18.6■□□□□ 0.57
CYB561A3-215ENST00000540317 PLEKHD1A6NEE1 506 aa18.59■□□□□ 0.57
CYB561A3-215ENST00000540317 NUP153P49790 1475 aaKnown RBP18.59■□□□□ 0.57
CYB561A3-215ENST00000540317 COL17A1Q9UMD9 1497 aaPredicted RBP18.56■□□□□ 0.56
CYB561A3-215ENST00000540317 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
CYB561A3-215ENST00000540317 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
CYB561A3-215ENST00000540317 CLIP1P30622 1438 aa18.53■□□□□ 0.56
CYB561A3-215ENST00000540317 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.56
CYB561A3-215ENST00000540317 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
CYB561A3-215ENST00000540317 KDM4FA0A1W2PPD8 638 aa18.47■□□□□ 0.55
CYB561A3-215ENST00000540317 ABCA9Q8IUA7 1624 aa18.45■□□□□ 0.54
CYB561A3-215ENST00000540317 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
CYB561A3-215ENST00000540317 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
CYB561A3-215ENST00000540317 PHLDB1Q86UU1 1377 aa18.43■□□□□ 0.54
CYB561A3-215ENST00000540317 HRCP23327 699 aa18.42■□□□□ 0.54
CYB561A3-215ENST00000540317 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
CYB561A3-215ENST00000540317 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
CYB561A3-215ENST00000540317 ARAP3Q8WWN8 1544 aa18.4■□□□□ 0.54
CYB561A3-215ENST00000540317 HECW1Q76N89 1606 aa18.39■□□□□ 0.54
CYB561A3-215ENST00000540317 NEO1Q92859 1461 aa18.38■□□□□ 0.53
CYB561A3-215ENST00000540317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.36■□□□□ 0.53
CYB561A3-215ENST00000540317 FANCAO15360 1455 aa18.33■□□□□ 0.52
CYB561A3-215ENST00000540317 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
CYB561A3-215ENST00000540317 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
CYB561A3-215ENST00000540317 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
CYB561A3-215ENST00000540317 APLP2Q06481 763 aa18.3■□□□□ 0.52
CYB561A3-215ENST00000540317 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
CYB561A3-215ENST00000540317 PLCH2O75038 1416 aa18.29■□□□□ 0.52
CYB561A3-215ENST00000540317 TROQ12816 1431 aaPredicted RBP18.29■□□□□ 0.52
CYB561A3-215ENST00000540317 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
CYB561A3-215ENST00000540317 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
CYB561A3-215ENST00000540317 DENND4BO75064 1496 aaPredicted RBP18.28■□□□□ 0.52
CYB561A3-215ENST00000540317 PCF11O94913 1555 aaKnown RBP18.26■□□□□ 0.51
CYB561A3-215ENST00000540317 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
CYB561A3-215ENST00000540317 ARID4BQ4LE39 1312 aaPredicted RBP18.25■□□□□ 0.51
CYB561A3-215ENST00000540317 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
CYB561A3-215ENST00000540317 CFAP74Q9C0B2 1584 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms