RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
CYB561A3-215ENST00000540317 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
CYB561A3-215ENST00000540317 ABCC9O60706 1549 aa24.61■■□□□ 1.53
CYB561A3-215ENST00000540317 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
CYB561A3-215ENST00000540317 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
CYB561A3-215ENST00000540317 NACADO15069 1562 aa23.38■■□□□ 1.33
CYB561A3-215ENST00000540317 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
CYB561A3-215ENST00000540317 ZCCHC6Q5VYS8 1495 aaKnown RBP23.07■■□□□ 1.28
CYB561A3-215ENST00000540317 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
CYB561A3-215ENST00000540317 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
CYB561A3-215ENST00000540317 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
CYB561A3-215ENST00000540317 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
CYB561A3-215ENST00000540317 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
CYB561A3-215ENST00000540317 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
CYB561A3-215ENST00000540317 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
CYB561A3-215ENST00000540317 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
CYB561A3-215ENST00000540317 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
CYB561A3-215ENST00000540317 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
CYB561A3-215ENST00000540317 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
CYB561A3-215ENST00000540317 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
CYB561A3-215ENST00000540317 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
CYB561A3-215ENST00000540317 BAZ1AQ9NRL2 1556 aaPredicted RBP21.56■■□□□ 1.04
CYB561A3-215ENST00000540317 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
CYB561A3-215ENST00000540317 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
CYB561A3-215ENST00000540317 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
CYB561A3-215ENST00000540317 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
CYB561A3-215ENST00000540317 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
CYB561A3-215ENST00000540317 ERCC6Q03468 1493 aa21.25■□□□□ 0.99
CYB561A3-215ENST00000540317 NESP48681 1621 aa21.2■□□□□ 0.98
CYB561A3-215ENST00000540317 WIZO95785 1651 aa21.18■□□□□ 0.98
CYB561A3-215ENST00000540317 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
CYB561A3-215ENST00000540317 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
CYB561A3-215ENST00000540317 CUX2O14529 1486 aa21.03■□□□□ 0.96
CYB561A3-215ENST00000540317 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
CYB561A3-215ENST00000540317 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
CYB561A3-215ENST00000540317 TOP2AP11388 1531 aaKnown RBP20.91■□□□□ 0.94
CYB561A3-215ENST00000540317 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
CYB561A3-215ENST00000540317 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.93
CYB561A3-215ENST00000540317 CFTRP13569 1480 aa20.8■□□□□ 0.92
CYB561A3-215ENST00000540317 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
CYB561A3-215ENST00000540317 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
CYB561A3-215ENST00000540317 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
CYB561A3-215ENST00000540317 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
CYB561A3-215ENST00000540317 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
CYB561A3-215ENST00000540317 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
CYB561A3-215ENST00000540317 WDR62O43379 1518 aa20.65■□□□□ 0.9
CYB561A3-215ENST00000540317 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
CYB561A3-215ENST00000540317 PRDM2Q13029 1718 aa20.48■□□□□ 0.87
CYB561A3-215ENST00000540317 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
CYB561A3-215ENST00000540317 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
CYB561A3-215ENST00000540317 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
CYB561A3-215ENST00000540317 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
CYB561A3-215ENST00000540317 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
CYB561A3-215ENST00000540317 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
CYB561A3-215ENST00000540317 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
CYB561A3-215ENST00000540317 SOGA1O94964 1423 aa20.16■□□□□ 0.82
CYB561A3-215ENST00000540317 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.82
CYB561A3-215ENST00000540317 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
CYB561A3-215ENST00000540317 TARBP1Q13395 1621 aaKnown RBP20.12■□□□□ 0.81
CYB561A3-215ENST00000540317 CUX1P39880 1505 aa20.11■□□□□ 0.81
CYB561A3-215ENST00000540317 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
CYB561A3-215ENST00000540317 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
CYB561A3-215ENST00000540317 EIF4G3O43432 1585 aaKnown RBP20.1■□□□□ 0.81
CYB561A3-215ENST00000540317 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
CYB561A3-215ENST00000540317 FBLN2P98095 1184 aa20.08■□□□□ 0.8
CYB561A3-215ENST00000540317 TRIM41Q8WV44 630 aa20.08■□□□□ 0.8
CYB561A3-215ENST00000540317 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
CYB561A3-215ENST00000540317 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
CYB561A3-215ENST00000540317 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
CYB561A3-215ENST00000540317 SNAPC4Q5SXM2 1469 aa19.91■□□□□ 0.78
CYB561A3-215ENST00000540317 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
CYB561A3-215ENST00000540317 GAPVD1Q14C86 1478 aa19.89■□□□□ 0.77
CYB561A3-215ENST00000540317 CHD1O14646 1710 aa19.88■□□□□ 0.77
CYB561A3-215ENST00000540317 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
CYB561A3-215ENST00000540317 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
CYB561A3-215ENST00000540317 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
CYB561A3-215ENST00000540317 SYNJ1O43426 1573 aa19.84■□□□□ 0.77
CYB561A3-215ENST00000540317 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
CYB561A3-215ENST00000540317 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
CYB561A3-215ENST00000540317 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
CYB561A3-215ENST00000540317 BIVM-ERCC5R4GMW8 1640 aa19.81■□□□□ 0.76
CYB561A3-215ENST00000540317 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
CYB561A3-215ENST00000540317 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
CYB561A3-215ENST00000540317 CYB5RLQ6IPT4 315 aa19.78■□□□□ 0.76
CYB561A3-215ENST00000540317 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.75
CYB561A3-215ENST00000540317 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
CYB561A3-215ENST00000540317 CLASP1Q7Z460 1538 aa19.67■□□□□ 0.74
CYB561A3-215ENST00000540317 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.74
CYB561A3-215ENST00000540317 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
CYB561A3-215ENST00000540317 ARAP1Q96P48 1450 aa19.64■□□□□ 0.73
CYB561A3-215ENST00000540317 ERICH3Q5RHP9 1530 aa19.63■□□□□ 0.73
CYB561A3-215ENST00000540317 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
CYB561A3-215ENST00000540317 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
CYB561A3-215ENST00000540317 NUP160Q12769 1436 aa19.55■□□□□ 0.72
CYB561A3-215ENST00000540317 IGF1RP08069 1367 aa19.52■□□□□ 0.72
CYB561A3-215ENST00000540317 CEP170Q5SW79 1584 aa19.52■□□□□ 0.72
CYB561A3-215ENST00000540317 TRHP20396 242 aaPredicted RBP19.51■□□□□ 0.71
CYB561A3-215ENST00000540317 JPH4Q96JJ6 628 aa19.47■□□□□ 0.71
CYB561A3-215ENST00000540317 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
CYB561A3-215ENST00000540317 CARMIL1Q5VZK9 1371 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms