RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
SLC3A2-215ENST00000539891 KIAA0586Q9BVV6 1533 aa18.42■□□□□ 0.54
SLC3A2-215ENST00000539891 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
SLC3A2-215ENST00000539891 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
SLC3A2-215ENST00000539891 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
SLC3A2-215ENST00000539891 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
SLC3A2-215ENST00000539891 CTTNBP2Q8WZ74 1663 aa18.24■□□□□ 0.51
SLC3A2-215ENST00000539891 EEA1Q15075 1411 aa18.23■□□□□ 0.51
SLC3A2-215ENST00000539891 CARMIL2Q6F5E8 1435 aa18.22■□□□□ 0.51
SLC3A2-215ENST00000539891 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
SLC3A2-215ENST00000539891 UGGT2Q9NYU1 1516 aa18.21■□□□□ 0.51
SLC3A2-215ENST00000539891 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
SLC3A2-215ENST00000539891 DISP1Q96F81 1524 aa18.18■□□□□ 0.5
SLC3A2-215ENST00000539891 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
SLC3A2-215ENST00000539891 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
SLC3A2-215ENST00000539891 ADCY10Q96PN6 1610 aa18.17■□□□□ 0.5
SLC3A2-215ENST00000539891 PTPRGP23470 1445 aa18.16■□□□□ 0.5
SLC3A2-215ENST00000539891 KIAA0556O60303 1618 aa18.14■□□□□ 0.49
SLC3A2-215ENST00000539891 MAPKBP1O60336 1514 aa18.09■□□□□ 0.49
SLC3A2-215ENST00000539891 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.49
SLC3A2-215ENST00000539891 KIF13AQ9H1H9 1805 aa18.08■□□□□ 0.48
SLC3A2-215ENST00000539891 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
SLC3A2-215ENST00000539891 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
SLC3A2-215ENST00000539891 KIF21BO75037 1637 aa18.05■□□□□ 0.48
SLC3A2-215ENST00000539891 UACAQ9BZF9 1416 aa18.05■□□□□ 0.48
SLC3A2-215ENST00000539891 ABCC2Q92887 1545 aa18.04■□□□□ 0.48
SLC3A2-215ENST00000539891 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
SLC3A2-215ENST00000539891 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
SLC3A2-215ENST00000539891 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
SLC3A2-215ENST00000539891 SAMD9Q5K651 1589 aa17.98■□□□□ 0.47
SLC3A2-215ENST00000539891 DIP2BQ9P265 1576 aa17.98■□□□□ 0.47
SLC3A2-215ENST00000539891 KDM5BQ9UGL1 1544 aa17.97■□□□□ 0.47
SLC3A2-215ENST00000539891 ABCA8O94911 1581 aa17.95■□□□□ 0.46
SLC3A2-215ENST00000539891 PLB1Q6P1J6 1458 aa17.93■□□□□ 0.46
SLC3A2-215ENST00000539891 ZCCHC11Q5TAX3 1644 aaKnown RBP17.93■□□□□ 0.46
SLC3A2-215ENST00000539891 FAM69CQ0P6D2 419 aa17.93■□□□□ 0.46
SLC3A2-215ENST00000539891 ASXL2Q76L83 1435 aa17.92■□□□□ 0.46
SLC3A2-215ENST00000539891 GLI2P10070 1586 aa17.88■□□□□ 0.45
SLC3A2-215ENST00000539891 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
SLC3A2-215ENST00000539891 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
SLC3A2-215ENST00000539891 TSPOAP1O95153 1857 aa17.85■□□□□ 0.45
SLC3A2-215ENST00000539891 EPRSP07814 1512 aaKnown RBP17.83■□□□□ 0.44
SLC3A2-215ENST00000539891 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.44
SLC3A2-215ENST00000539891 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
SLC3A2-215ENST00000539891 WDR7Q9Y4E6 1490 aa17.81■□□□□ 0.44
SLC3A2-215ENST00000539891 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
SLC3A2-215ENST00000539891 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
SLC3A2-215ENST00000539891 RANGAP1P46060 587 aaPredicted RBP17.79■□□□□ 0.44
SLC3A2-215ENST00000539891 PPRC1Q5VV67 1664 aaKnown RBP17.79■□□□□ 0.44
SLC3A2-215ENST00000539891 ATP10BO94823 1461 aa17.78■□□□□ 0.44
SLC3A2-215ENST00000539891 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
SLC3A2-215ENST00000539891 NUP153P49790 1475 aaKnown RBP17.74■□□□□ 0.43
SLC3A2-215ENST00000539891 CFAP43Q8NDM7 1665 aa17.73■□□□□ 0.43
SLC3A2-215ENST00000539891 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
SLC3A2-215ENST00000539891 KDM6BO15054 1643 aa17.72■□□□□ 0.43
SLC3A2-215ENST00000539891 ARID3CA6NKF2 412 aa17.69■□□□□ 0.42
SLC3A2-215ENST00000539891 FMN1Q68DA7 1419 aa17.68■□□□□ 0.42
SLC3A2-215ENST00000539891 TEX14Q8IWB6 1497 aa17.68■□□□□ 0.42
SLC3A2-215ENST00000539891 KCNH8Q96L42 1107 aa17.68■□□□□ 0.42
SLC3A2-215ENST00000539891 MAGI3Q5TCQ9 1506 aa17.66■□□□□ 0.42
SLC3A2-215ENST00000539891 CD109Q6YHK3 1445 aa17.65■□□□□ 0.42
SLC3A2-215ENST00000539891 ABCA9Q8IUA7 1624 aa17.64■□□□□ 0.42
SLC3A2-215ENST00000539891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
SLC3A2-215ENST00000539891 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
SLC3A2-215ENST00000539891 HECW1Q76N89 1606 aa17.62■□□□□ 0.41
SLC3A2-215ENST00000539891 PLEKHD1A6NEE1 506 aa17.6■□□□□ 0.41
SLC3A2-215ENST00000539891 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
SLC3A2-215ENST00000539891 CDK13Q14004 1512 aaKnown RBP17.58■□□□□ 0.4
SLC3A2-215ENST00000539891 CLIP1P30622 1438 aa17.56■□□□□ 0.4
SLC3A2-215ENST00000539891 LRRIQ1Q96JM4 1722 aa17.56■□□□□ 0.4
SLC3A2-215ENST00000539891 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
SLC3A2-215ENST00000539891 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
SLC3A2-215ENST00000539891 ARAP3Q8WWN8 1544 aa17.52■□□□□ 0.4
SLC3A2-215ENST00000539891 PCF11O94913 1555 aaKnown RBP17.52■□□□□ 0.4
SLC3A2-215ENST00000539891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.51■□□□□ 0.39
SLC3A2-215ENST00000539891 ATP1B4Q9UN42 357 aaPredicted RBP17.51■□□□□ 0.39
SLC3A2-215ENST00000539891 NEO1Q92859 1461 aa17.51■□□□□ 0.39
SLC3A2-215ENST00000539891 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
SLC3A2-215ENST00000539891 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
SLC3A2-215ENST00000539891 FYCO1Q9BQS8 1478 aa17.48■□□□□ 0.39
SLC3A2-215ENST00000539891 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
SLC3A2-215ENST00000539891 TROQ12816 1431 aaPredicted RBP17.45■□□□□ 0.38
SLC3A2-215ENST00000539891 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
SLC3A2-215ENST00000539891 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
SLC3A2-215ENST00000539891 KIF14Q15058 1648 aa17.43■□□□□ 0.38
SLC3A2-215ENST00000539891 MYO5CQ9NQX4 1742 aa17.43■□□□□ 0.38
SLC3A2-215ENST00000539891 FANCAO15360 1455 aa17.42■□□□□ 0.38
SLC3A2-215ENST00000539891 PLCH2O75038 1416 aa17.41■□□□□ 0.38
SLC3A2-215ENST00000539891 AKNAQ7Z591 1439 aa17.39■□□□□ 0.37
SLC3A2-215ENST00000539891 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.37
SLC3A2-215ENST00000539891 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
SLC3A2-215ENST00000539891 RICTORQ6R327 1708 aa17.38■□□□□ 0.37
SLC3A2-215ENST00000539891 FRMPD1Q5SYB0 1578 aa17.38■□□□□ 0.37
SLC3A2-215ENST00000539891 KDM4FA0A1W2PPD8 638 aa17.36■□□□□ 0.37
SLC3A2-215ENST00000539891 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
SLC3A2-215ENST00000539891 RAPGEF3O95398 923 aa17.35■□□□□ 0.37
SLC3A2-215ENST00000539891 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
SLC3A2-215ENST00000539891 EFCAB2Q5VUJ9 269 aa17.32■□□□□ 0.36
SLC3A2-215ENST00000539891 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
SLC3A2-215ENST00000539891 ADGRL1O94910 1474 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms