RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
LDHB-208ENST00000539782 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.38
LDHB-208ENST00000539782 KIF13AQ9H1H9 1805 aa12.68□□□□□ -0.38
LDHB-208ENST00000539782 FAM69CQ0P6D2 419 aa12.65□□□□□ -0.38
LDHB-208ENST00000539782 ABCC10Q5T3U5 1492 aa12.64□□□□□ -0.39
LDHB-208ENST00000539782 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
LDHB-208ENST00000539782 CUL7Q14999 1698 aa12.63□□□□□ -0.39
LDHB-208ENST00000539782 MAPKBP1O60336 1514 aa12.62□□□□□ -0.39
LDHB-208ENST00000539782 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
LDHB-208ENST00000539782 ADCY10Q96PN6 1610 aa12.61□□□□□ -0.39
LDHB-208ENST00000539782 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
LDHB-208ENST00000539782 IGF1RP08069 1367 aa12.58□□□□□ -0.4
LDHB-208ENST00000539782 TTBK1Q5TCY1 1321 aaPredicted RBP12.58□□□□□ -0.4
LDHB-208ENST00000539782 KDM6BO15054 1643 aa12.56□□□□□ -0.4
LDHB-208ENST00000539782 PTPRGP23470 1445 aa12.55□□□□□ -0.4
LDHB-208ENST00000539782 CARMIL2Q6F5E8 1435 aa12.55□□□□□ -0.4
LDHB-208ENST00000539782 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
LDHB-208ENST00000539782 TSPOAP1O95153 1857 aa12.52□□□□□ -0.41
LDHB-208ENST00000539782 TNIKQ9UKE5 1360 aa12.52□□□□□ -0.41
LDHB-208ENST00000539782 IQGAP2Q13576 1575 aa12.51□□□□□ -0.41
LDHB-208ENST00000539782 ABCC2Q92887 1545 aa12.49□□□□□ -0.41
LDHB-208ENST00000539782 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
LDHB-208ENST00000539782 ASXL2Q76L83 1435 aa12.46□□□□□ -0.41
LDHB-208ENST00000539782 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
LDHB-208ENST00000539782 UHRF1BP1LA0JNW5 1464 aa12.44□□□□□ -0.42
LDHB-208ENST00000539782 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
LDHB-208ENST00000539782 GLI2P10070 1586 aa12.43□□□□□ -0.42
LDHB-208ENST00000539782 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
LDHB-208ENST00000539782 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
LDHB-208ENST00000539782 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
LDHB-208ENST00000539782 KIAA0556O60303 1618 aa12.39□□□□□ -0.43
LDHB-208ENST00000539782 TEX14Q8IWB6 1497 aa12.39□□□□□ -0.43
LDHB-208ENST00000539782 PPRC1Q5VV67 1664 aaKnown RBP12.38□□□□□ -0.43
LDHB-208ENST00000539782 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
LDHB-208ENST00000539782 KDM5BQ9UGL1 1544 aa12.38□□□□□ -0.43
LDHB-208ENST00000539782 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
LDHB-208ENST00000539782 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
LDHB-208ENST00000539782 MAP3K4Q9Y6R4 1608 aa12.35□□□□□ -0.43
LDHB-208ENST00000539782 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
LDHB-208ENST00000539782 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
LDHB-208ENST00000539782 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
LDHB-208ENST00000539782 FAM9AQ8IZU1 332 aaPredicted RBP12.31□□□□□ -0.44
LDHB-208ENST00000539782 COL17A1Q9UMD9 1497 aaPredicted RBP12.3□□□□□ -0.44
LDHB-208ENST00000539782 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
LDHB-208ENST00000539782 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
LDHB-208ENST00000539782 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
LDHB-208ENST00000539782 ABCA8O94911 1581 aa12.26□□□□□ -0.45
LDHB-208ENST00000539782 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
LDHB-208ENST00000539782 HECW2Q9P2P5 1572 aa12.22□□□□□ -0.45
LDHB-208ENST00000539782 PRXQ9BXM0 1461 aa12.22□□□□□ -0.45
LDHB-208ENST00000539782 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
LDHB-208ENST00000539782 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
LDHB-208ENST00000539782 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
LDHB-208ENST00000539782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
LDHB-208ENST00000539782 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
LDHB-208ENST00000539782 KIF21BO75037 1637 aa12.17□□□□□ -0.46
LDHB-208ENST00000539782 ARAP3Q8WWN8 1544 aa12.15□□□□□ -0.46
LDHB-208ENST00000539782 ATP10BO94823 1461 aa12.14□□□□□ -0.47
LDHB-208ENST00000539782 PHLDB1Q86UU1 1377 aa12.14□□□□□ -0.47
LDHB-208ENST00000539782 ABCA9Q8IUA7 1624 aa12.13□□□□□ -0.47
LDHB-208ENST00000539782 RAPGEF6Q8TEU7 1601 aa12.13□□□□□ -0.47
LDHB-208ENST00000539782 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
LDHB-208ENST00000539782 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
LDHB-208ENST00000539782 NEO1Q92859 1461 aa12.11□□□□□ -0.47
LDHB-208ENST00000539782 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
LDHB-208ENST00000539782 ARID4BQ4LE39 1312 aaPredicted RBP12.1□□□□□ -0.47
LDHB-208ENST00000539782 RAPGEF3O95398 923 aa12.08□□□□□ -0.48
LDHB-208ENST00000539782 EEA1Q15075 1411 aa12.07□□□□□ -0.48
LDHB-208ENST00000539782 FHOD3Q2V2M9 1422 aa12.07□□□□□ -0.48
LDHB-208ENST00000539782 PTPRMP28827 1452 aa12.07□□□□□ -0.48
LDHB-208ENST00000539782 NUP153P49790 1475 aaKnown RBP12.06□□□□□ -0.48
LDHB-208ENST00000539782 PLEKHD1A6NEE1 506 aa12.05□□□□□ -0.48
LDHB-208ENST00000539782 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
LDHB-208ENST00000539782 DENND4BO75064 1496 aaPredicted RBP12.03□□□□□ -0.48
LDHB-208ENST00000539782 FRMPD1Q5SYB0 1578 aa12.03□□□□□ -0.48
LDHB-208ENST00000539782 CFAP74Q9C0B2 1584 aa12.03□□□□□ -0.48
LDHB-208ENST00000539782 ARHGEF40Q8TER5 1519 aa12.02□□□□□ -0.48
LDHB-208ENST00000539782 MADDQ8WXG6 1647 aa12.02□□□□□ -0.49
LDHB-208ENST00000539782 BCORL1Q5H9F3 1711 aa12.02□□□□□ -0.49
LDHB-208ENST00000539782 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
LDHB-208ENST00000539782 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
LDHB-208ENST00000539782 FANCAO15360 1455 aa12.01□□□□□ -0.49
LDHB-208ENST00000539782 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
LDHB-208ENST00000539782 FBXO41Q8TF61 875 aa11.99□□□□□ -0.49
LDHB-208ENST00000539782 PCF11O94913 1555 aaKnown RBP11.99□□□□□ -0.49
LDHB-208ENST00000539782 RIMS1Q86UR5 1692 aaKnown RBP11.98□□□□□ -0.49
LDHB-208ENST00000539782 PLPPR3Q6T4P5 718 aa11.98□□□□□ -0.49
LDHB-208ENST00000539782 TTC37Q6PGP7 1564 aa11.97□□□□□ -0.49
LDHB-208ENST00000539782 ZFYVE16Q7Z3T8 1539 aa11.97□□□□□ -0.49
LDHB-208ENST00000539782 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.97□□□□□ -0.491e-8■■□□□ 12.6
LDHB-208ENST00000539782 RICTORQ6R327 1708 aa11.97□□□□□ -0.49
LDHB-208ENST00000539782 ATP1B4Q9UN42 357 aaPredicted RBP11.96□□□□□ -0.49
LDHB-208ENST00000539782 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.5
LDHB-208ENST00000539782 CDK13Q14004 1512 aaKnown RBP11.95□□□□□ -0.5
LDHB-208ENST00000539782 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
LDHB-208ENST00000539782 MAGI2Q86UL8 1455 aa11.94□□□□□ -0.5
LDHB-208ENST00000539782 UBTFP17480 764 aaKnown RBP11.93□□□□□ -0.5
LDHB-208ENST00000539782 MLECQ14165 292 aa11.93□□□□□ -0.5
LDHB-208ENST00000539782 EHMT2Q96KQ7 1210 aa11.93□□□□□ -0.5
LDHB-208ENST00000539782 YEATS2Q9ULM3 1422 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms