RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.97
TSPAN9-207ENST00000539631 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
TSPAN9-207ENST00000539631 SHROOM2Q13796 1616 aa21.1■□□□□ 0.97
TSPAN9-207ENST00000539631 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
TSPAN9-207ENST00000539631 CTTNBP2Q8WZ74 1663 aa21.08■□□□□ 0.96
TSPAN9-207ENST00000539631 KIF21BO75037 1637 aa21.07■□□□□ 0.96
TSPAN9-207ENST00000539631 IQGAP2Q13576 1575 aa21.03■□□□□ 0.96
TSPAN9-207ENST00000539631 ERCC6L2Q5T890 1561 aa21.03■□□□□ 0.96
TSPAN9-207ENST00000539631 JPH4Q96JJ6 628 aa21.03■□□□□ 0.96
TSPAN9-207ENST00000539631 PRG4Q92954 1404 aaPredicted RBP20.98■□□□□ 0.95
TSPAN9-207ENST00000539631 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
TSPAN9-207ENST00000539631 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
TSPAN9-207ENST00000539631 GOLGA3Q08378 1498 aa20.93■□□□□ 0.94
TSPAN9-207ENST00000539631 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
TSPAN9-207ENST00000539631 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.93
TSPAN9-207ENST00000539631 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
TSPAN9-207ENST00000539631 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
TSPAN9-207ENST00000539631 CARMIL2Q6F5E8 1435 aa20.85■□□□□ 0.93
TSPAN9-207ENST00000539631 KIAA0556O60303 1618 aa20.84■□□□□ 0.93
TSPAN9-207ENST00000539631 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
TSPAN9-207ENST00000539631 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
TSPAN9-207ENST00000539631 RANGAP1P46060 587 aaPredicted RBP20.78■□□□□ 0.92
TSPAN9-207ENST00000539631 SAMD9Q5K651 1589 aa20.77■□□□□ 0.92
TSPAN9-207ENST00000539631 TTBK1Q5TCY1 1321 aaPredicted RBP20.76■□□□□ 0.91
TSPAN9-207ENST00000539631 PTPRGP23470 1445 aa20.74■□□□□ 0.91
TSPAN9-207ENST00000539631 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
TSPAN9-207ENST00000539631 EFCAB5A4FU69 1503 aa20.68■□□□□ 0.9
TSPAN9-207ENST00000539631 ADCY10Q96PN6 1610 aa20.68■□□□□ 0.9
TSPAN9-207ENST00000539631 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
TSPAN9-207ENST00000539631 FHOD3Q2V2M9 1422 aa20.64■□□□□ 0.89
TSPAN9-207ENST00000539631 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
TSPAN9-207ENST00000539631 UACAQ9BZF9 1416 aa20.61■□□□□ 0.89
TSPAN9-207ENST00000539631 PLB1Q6P1J6 1458 aa20.6■□□□□ 0.89
TSPAN9-207ENST00000539631 ABCA8O94911 1581 aa20.59■□□□□ 0.89
TSPAN9-207ENST00000539631 ABCC2Q92887 1545 aa20.59■□□□□ 0.89
TSPAN9-207ENST00000539631 UHRF1BP1LA0JNW5 1464 aa20.59■□□□□ 0.89
TSPAN9-207ENST00000539631 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
TSPAN9-207ENST00000539631 CLIP1P30622 1438 aa20.55■□□□□ 0.88
TSPAN9-207ENST00000539631 RAPGEF6Q8TEU7 1601 aa20.54■□□□□ 0.88
TSPAN9-207ENST00000539631 NPM1P06748 294 aaKnown RBP eCLIP20.53■□□□□ 0.88
TSPAN9-207ENST00000539631 CEP162Q5TB80 1403 aa20.52■□□□□ 0.87
TSPAN9-207ENST00000539631 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
TSPAN9-207ENST00000539631 KDM5BQ9UGL1 1544 aa20.49■□□□□ 0.87
TSPAN9-207ENST00000539631 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
TSPAN9-207ENST00000539631 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
TSPAN9-207ENST00000539631 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
TSPAN9-207ENST00000539631 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
TSPAN9-207ENST00000539631 ATP10BO94823 1461 aa20.41■□□□□ 0.86
TSPAN9-207ENST00000539631 PCF11O94913 1555 aaKnown RBP20.4■□□□□ 0.86
TSPAN9-207ENST00000539631 HECW1Q76N89 1606 aa20.4■□□□□ 0.86
TSPAN9-207ENST00000539631 KIF13AQ9H1H9 1805 aa20.4■□□□□ 0.86
TSPAN9-207ENST00000539631 ASXL2Q76L83 1435 aa20.39■□□□□ 0.85
TSPAN9-207ENST00000539631 LRRIQ1Q96JM4 1722 aa20.39■□□□□ 0.85
TSPAN9-207ENST00000539631 ATP1B4Q9UN42 357 aaPredicted RBP20.37■□□□□ 0.85
TSPAN9-207ENST00000539631 DIP2BQ9P265 1576 aa20.36■□□□□ 0.85
TSPAN9-207ENST00000539631 ABCC10Q5T3U5 1492 aa20.35■□□□□ 0.85
TSPAN9-207ENST00000539631 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
TSPAN9-207ENST00000539631 CDK13Q14004 1512 aaKnown RBP20.33■□□□□ 0.85
TSPAN9-207ENST00000539631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
TSPAN9-207ENST00000539631 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.85
TSPAN9-207ENST00000539631 WDR7Q9Y4E6 1490 aa20.32■□□□□ 0.84
TSPAN9-207ENST00000539631 EPRSP07814 1512 aaKnown RBP20.32■□□□□ 0.84
TSPAN9-207ENST00000539631 FYCO1Q9BQS8 1478 aa20.31■□□□□ 0.84
TSPAN9-207ENST00000539631 FAM69CQ0P6D2 419 aa20.29■□□□□ 0.84
TSPAN9-207ENST00000539631 GLI2P10070 1586 aa20.26■□□□□ 0.83
TSPAN9-207ENST00000539631 KCNH8Q96L42 1107 aa20.25■□□□□ 0.83
TSPAN9-207ENST00000539631 VPS8Q8N3P4 1428 aa20.25■□□□□ 0.83
TSPAN9-207ENST00000539631 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
TSPAN9-207ENST00000539631 TSPOAP1O95153 1857 aa20.24■□□□□ 0.83
TSPAN9-207ENST00000539631 PLEKHD1A6NEE1 506 aa20.23■□□□□ 0.83
TSPAN9-207ENST00000539631 MAP3K4Q9Y6R4 1608 aa20.21■□□□□ 0.83
TSPAN9-207ENST00000539631 CFAP43Q8NDM7 1665 aa20.19■□□□□ 0.82
TSPAN9-207ENST00000539631 PPRC1Q5VV67 1664 aaKnown RBP20.17■□□□□ 0.82
TSPAN9-207ENST00000539631 MAGI3Q5TCQ9 1506 aa20.17■□□□□ 0.82
TSPAN9-207ENST00000539631 ABCA9Q8IUA7 1624 aa20.16■□□□□ 0.82
TSPAN9-207ENST00000539631 CDK11AQ9UQ88 783 aaPredicted RBP20.16■□□□□ 0.82
TSPAN9-207ENST00000539631 TROQ12816 1431 aaPredicted RBP20.14■□□□□ 0.81
TSPAN9-207ENST00000539631 KIF14Q15058 1648 aa20.13■□□□□ 0.81
TSPAN9-207ENST00000539631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.81
TSPAN9-207ENST00000539631 CD109Q6YHK3 1445 aa20.11■□□□□ 0.81
TSPAN9-207ENST00000539631 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
TSPAN9-207ENST00000539631 TTC37Q6PGP7 1564 aa20.11■□□□□ 0.81
TSPAN9-207ENST00000539631 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
TSPAN9-207ENST00000539631 MTUS2Q5JR59 1369 aa20.05■□□□□ 0.8
TSPAN9-207ENST00000539631 MYO5CQ9NQX4 1742 aa20.05■□□□□ 0.8
TSPAN9-207ENST00000539631 MAP3K1Q13233 1512 aa20.04■□□□□ 0.8
TSPAN9-207ENST00000539631 ILDR1Q86SU0 546 aaPredicted RBP20.04■□□□□ 0.8
TSPAN9-207ENST00000539631 TEX14Q8IWB6 1497 aa20.04■□□□□ 0.8
TSPAN9-207ENST00000539631 LRRC9Q6ZRR7 1453 aa20■□□□□ 0.79
TSPAN9-207ENST00000539631 CDC42BPAQ5VT25 1732 aa19.99■□□□□ 0.79
TSPAN9-207ENST00000539631 SUPT6HQ7KZ85 1726 aaKnown RBP19.99■□□□□ 0.79
TSPAN9-207ENST00000539631 KDM6BO15054 1643 aa19.98■□□□□ 0.79
TSPAN9-207ENST00000539631 APLP2Q06481 763 aa19.98■□□□□ 0.79
TSPAN9-207ENST00000539631 KANK4Q5T7N3 995 aaPredicted RBP19.98■□□□□ 0.79
TSPAN9-207ENST00000539631 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
TSPAN9-207ENST00000539631 PLCH2O75038 1416 aa19.97■□□□□ 0.79
TSPAN9-207ENST00000539631 PREX2Q70Z35 1606 aa19.96■□□□□ 0.79
TSPAN9-207ENST00000539631 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
TSPAN9-207ENST00000539631 FANCAO15360 1455 aa19.94■□□□□ 0.78
TSPAN9-207ENST00000539631 NEO1Q92859 1461 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms