RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 DEKP35659 375 aaKnown RBP8.26□□□□□ -1.09
RAB3GAP1-207ENST00000539493 DNMBPQ6XZF7 1577 aa8.26□□□□□ -1.09
RAB3GAP1-207ENST00000539493 VPS8Q8N3P4 1428 aa8.26□□□□□ -1.09
RAB3GAP1-207ENST00000539493 RBM19Q9Y4C8 960 aaKnown RBP8.26□□□□□ -1.09
RAB3GAP1-207ENST00000539493 ZNF316A6NFI3 1004 aaPredicted RBP8.25□□□□□ -1.09
RAB3GAP1-207ENST00000539493 DNAJC5BQ9UF47 199 aa8.25□□□□□ -1.09
RAB3GAP1-207ENST00000539493 IGF1RP08069 1367 aa8.24□□□□□ -1.09
RAB3GAP1-207ENST00000539493 TOPBP1Q92547 1522 aa8.24□□□□□ -1.09
RAB3GAP1-207ENST00000539493 RANGAP1P46060 587 aaPredicted RBP8.23□□□□□ -1.09
RAB3GAP1-207ENST00000539493 POLA1P09884 1462 aaPredicted RBP8.23□□□□□ -1.09
RAB3GAP1-207ENST00000539493 ARAP1Q96P48 1450 aa8.21□□□□□ -1.09
RAB3GAP1-207ENST00000539493 RAD54L2Q9Y4B4 1467 aa8.21□□□□□ -1.09
RAB3GAP1-207ENST00000539493 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.09
RAB3GAP1-207ENST00000539493 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
RAB3GAP1-207ENST00000539493 PDS5BQ9NTI5 1447 aa8.2□□□□□ -1.1
RAB3GAP1-207ENST00000539493 CARMIL1Q5VZK9 1371 aa8.2□□□□□ -1.1
RAB3GAP1-207ENST00000539493 MIER1Q8N108 512 aa8.18□□□□□ -1.1
RAB3GAP1-207ENST00000539493 CCDC136Q96JN2 1154 aa8.18□□□□□ -1.1
RAB3GAP1-207ENST00000539493 NEFLP07196 543 aa8.18□□□□□ -1.1
RAB3GAP1-207ENST00000539493 ARHGAP35Q9NRY4 1499 aa8.17□□□□□ -1.1
RAB3GAP1-207ENST00000539493 KIF21AQ7Z4S6 1674 aa8.17□□□□□ -1.1
RAB3GAP1-207ENST00000539493 WDR97A6NE52 1622 aa8.16□□□□□ -1.1
RAB3GAP1-207ENST00000539493 YTHDC1Q96MU7 727 aaKnown RBP8.15□□□□□ -1.1
RAB3GAP1-207ENST00000539493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.15□□□□□ -1.11
RAB3GAP1-207ENST00000539493 CUL7Q14999 1698 aa8.14□□□□□ -1.11
RAB3GAP1-207ENST00000539493 ABCA5Q8WWZ7 1642 aa8.13□□□□□ -1.11
RAB3GAP1-207ENST00000539493 C11orf95C9JLR9 678 aaPredicted RBP8.12□□□□□ -1.11
RAB3GAP1-207ENST00000539493 NCBP3Q53F19 620 aaKnown RBP8.12□□□□□ -1.11
RAB3GAP1-207ENST00000539493 TDRD9Q8NDG6 1382 aaKnown RBP8.12□□□□□ -1.11
RAB3GAP1-207ENST00000539493 CCER1Q8TC90 406 aaPredicted RBP8.12□□□□□ -1.11
RAB3GAP1-207ENST00000539493 GAPVD1Q14C86 1478 aa8.11□□□□□ -1.11
RAB3GAP1-207ENST00000539493 TARBP1Q13395 1621 aaKnown RBP8.1□□□□□ -1.11
RAB3GAP1-207ENST00000539493 KANK4Q5T7N3 995 aaPredicted RBP8.1□□□□□ -1.11
RAB3GAP1-207ENST00000539493 MRC2Q9UBG0 1479 aa8.09□□□□□ -1.11
RAB3GAP1-207ENST00000539493 ARXQ96QS3 562 aa8.08□□□□□ -1.12
RAB3GAP1-207ENST00000539493 CTTNBP2Q8WZ74 1663 aa8.08□□□□□ -1.12
RAB3GAP1-207ENST00000539493 GLIPR1L2Q4G1C9 344 aa8.08□□□□□ -1.12
RAB3GAP1-207ENST00000539493 FGD1P98174 961 aa8.07□□□□□ -1.12
RAB3GAP1-207ENST00000539493 HNRNPUL2Q1KMD3 747 aaKnown RBP8.07□□□□□ -1.12
RAB3GAP1-207ENST00000539493 EFCAB5A4FU69 1503 aa8.06□□□□□ -1.12
RAB3GAP1-207ENST00000539493 FHAD1B1AJZ9 1412 aa8.06□□□□□ -1.12
RAB3GAP1-207ENST00000539493 MAP3K1Q13233 1512 aa8.06□□□□□ -1.12
RAB3GAP1-207ENST00000539493 TIAM1Q13009 1591 aa8.06□□□□□ -1.12
RAB3GAP1-207ENST00000539493 FHOD3Q2V2M9 1422 aa8.05□□□□□ -1.12
RAB3GAP1-207ENST00000539493 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.05□□□□□ -1.12
RAB3GAP1-207ENST00000539493 WDR62O43379 1518 aa8.05□□□□□ -1.12
RAB3GAP1-207ENST00000539493 PDIA4P13667 645 aaKnown RBP8.05□□□□□ -1.12
RAB3GAP1-207ENST00000539493 RRBP1Q9P2E9 1410 aaKnown RBP8.04□□□□□ -1.12
RAB3GAP1-207ENST00000539493 P3H3Q8IVL6 736 aa8.04□□□□□ -1.12
RAB3GAP1-207ENST00000539493 IL27Q8NEV9 243 aa8.04□□□□□ -1.12
RAB3GAP1-207ENST00000539493 ZMYND15Q9H091 742 aa8.04□□□□□ -1.12
RAB3GAP1-207ENST00000539493 PCF11O94913 1555 aaKnown RBP8.04□□□□□ -1.12
RAB3GAP1-207ENST00000539493 PDE4CQ08493 712 aa8.04□□□□□ -1.12
RAB3GAP1-207ENST00000539493 AQRO60306 1485 aaKnown RBP eCLIP8.04□□□□□ -1.121e-6■■□□□ 11.4
RAB3GAP1-207ENST00000539493 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
RAB3GAP1-207ENST00000539493 PBRM1Q86U86 1689 aa8.03□□□□□ -1.12
RAB3GAP1-207ENST00000539493 LRRC9Q6ZRR7 1453 aa8.02□□□□□ -1.13
RAB3GAP1-207ENST00000539493 AAMPQ13685 434 aa8.02□□□□□ -1.13
RAB3GAP1-207ENST00000539493 IFT140Q96RY7 1462 aa8.02□□□□□ -1.13
RAB3GAP1-207ENST00000539493 FYCO1Q9BQS8 1478 aa8.02□□□□□ -1.13
RAB3GAP1-207ENST00000539493 WASHC2CQ9Y4E1 1318 aa8.02□□□□□ -1.13
RAB3GAP1-207ENST00000539493 SAMD9Q5K651 1589 aa8.02□□□□□ -1.13
RAB3GAP1-207ENST00000539493 CFAP43Q8NDM7 1665 aa8.01□□□□□ -1.13
RAB3GAP1-207ENST00000539493 CASKIN1Q8WXD9 1431 aa8.01□□□□□ -1.13
RAB3GAP1-207ENST00000539493 WASHC2AQ641Q2 1341 aa8.01□□□□□ -1.13
RAB3GAP1-207ENST00000539493 ADAMTS12P58397 1594 aa8.01□□□□□ -1.13
RAB3GAP1-207ENST00000539493 CCNB3Q8WWL7 1395 aa8.01□□□□□ -1.13
RAB3GAP1-207ENST00000539493 FMN1Q68DA7 1419 aa8.01□□□□□ -1.13
RAB3GAP1-207ENST00000539493 GRIN2BQ13224 1484 aa8□□□□□ -1.13
RAB3GAP1-207ENST00000539493 ZNF608Q9ULD9 1512 aaPredicted RBP8□□□□□ -1.13
RAB3GAP1-207ENST00000539493 ERCC6Q03468 1493 aa8□□□□□ -1.13
RAB3GAP1-207ENST00000539493 SNAPC4Q5SXM2 1469 aa7.99□□□□□ -1.13
RAB3GAP1-207ENST00000539493 THOC2Q8NI27 1593 aaKnown RBP7.98□□□□□ -1.13
RAB3GAP1-207ENST00000539493 ATP1B4Q9UN42 357 aaPredicted RBP7.98□□□□□ -1.13
RAB3GAP1-207ENST00000539493 PHLDB1Q86UU1 1377 aa7.98□□□□□ -1.13
RAB3GAP1-207ENST00000539493 EIF4G3O43432 1585 aaKnown RBP7.96□□□□□ -1.13
RAB3GAP1-207ENST00000539493 IQGAP2Q13576 1575 aa7.96□□□□□ -1.13
RAB3GAP1-207ENST00000539493 TAF7LQ5H9L4 462 aa7.94□□□□□ -1.14
RAB3GAP1-207ENST00000539493 NOP58Q9Y2X3 529 aaKnown RBP7.94□□□□□ -1.14
RAB3GAP1-207ENST00000539493 DHX57Q6P158 1386 aaKnown RBP7.94□□□□□ -1.14
RAB3GAP1-207ENST00000539493 LRRIQ1Q96JM4 1722 aa7.94□□□□□ -1.14
RAB3GAP1-207ENST00000539493 RBM10P98175 930 aaKnown RBP7.94□□□□□ -1.14
RAB3GAP1-207ENST00000539493 ITGAEP38570 1179 aa7.93□□□□□ -1.14
RAB3GAP1-207ENST00000539493 FKBP8Q14318 412 aa7.93□□□□□ -1.14
RAB3GAP1-207ENST00000539493 GRIN2AQ12879 1464 aa7.92□□□□□ -1.14
RAB3GAP1-207ENST00000539493 UGGT2Q9NYU1 1516 aa7.92□□□□□ -1.14
RAB3GAP1-207ENST00000539493 AEBP2Q6ZN18 517 aaPredicted RBP7.92□□□□□ -1.14
RAB3GAP1-207ENST00000539493 USP35Q9P2H5 1018 aa7.92□□□□□ -1.14
RAB3GAP1-207ENST00000539493 KIAA0586Q9BVV6 1533 aa7.91□□□□□ -1.14
RAB3GAP1-207ENST00000539493 KLHL34Q8N239 644 aa7.91□□□□□ -1.14
RAB3GAP1-207ENST00000539493 MAGI1Q96QZ7 1491 aaPredicted RBP7.91□□□□□ -1.14
RAB3GAP1-207ENST00000539493 MTUS2Q5JR59 1369 aa7.91□□□□□ -1.14
RAB3GAP1-207ENST00000539493 VSIG10Q8N0Z9 540 aa7.9□□□□□ -1.14
RAB3GAP1-207ENST00000539493 FAM50AQ14320 339 aaKnown RBP7.9□□□□□ -1.14
RAB3GAP1-207ENST00000539493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.9□□□□□ -1.15
RAB3GAP1-207ENST00000539493 CCDC18Q5T9S5 1454 aa7.9□□□□□ -1.15
RAB3GAP1-207ENST00000539493 RAB3GAP2Q9H2M9 1393 aa7.89□□□□□ -1.15
RAB3GAP1-207ENST00000539493 EHBP1L1Q8N3D4 1523 aa7.89□□□□□ -1.15
RAB3GAP1-207ENST00000539493 HECW1Q76N89 1606 aa7.89□□□□□ -1.15
RAB3GAP1-207ENST00000539493 FGD6Q6ZV73 1430 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms