RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
CCND1-204ENST00000539241 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
CCND1-204ENST00000539241 CUL7Q14999 1698 aa24.28■■□□□ 1.48
CCND1-204ENST00000539241 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
CCND1-204ENST00000539241 NPM1P06748 294 aaKnown RBP eCLIP24.18■■□□□ 1.46
CCND1-204ENST00000539241 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
CCND1-204ENST00000539241 ADCY10Q96PN6 1610 aa24.1■■□□□ 1.45
CCND1-204ENST00000539241 MAPKBP1O60336 1514 aa24.1■■□□□ 1.45
CCND1-204ENST00000539241 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
CCND1-204ENST00000539241 FAM69CQ0P6D2 419 aa24.09■■□□□ 1.45
CCND1-204ENST00000539241 PTPRGP23470 1445 aa24.09■■□□□ 1.45
CCND1-204ENST00000539241 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
CCND1-204ENST00000539241 CARMIL2Q6F5E8 1435 aa24.06■■□□□ 1.44
CCND1-204ENST00000539241 TNIKQ9UKE5 1360 aa24.04■■□□□ 1.44
CCND1-204ENST00000539241 TTBK1Q5TCY1 1321 aaPredicted RBP24.04■■□□□ 1.44
CCND1-204ENST00000539241 IQGAP2Q13576 1575 aa24.03■■□□□ 1.44
CCND1-204ENST00000539241 RAPGEF2Q9Y4G8 1499 aa24.01■■□□□ 1.43
CCND1-204ENST00000539241 DIP2BQ9P265 1576 aa23.99■■□□□ 1.43
CCND1-204ENST00000539241 DISP1Q96F81 1524 aa23.94■■□□□ 1.42
CCND1-204ENST00000539241 ABCC2Q92887 1545 aa23.93■■□□□ 1.42
CCND1-204ENST00000539241 UGGT2Q9NYU1 1516 aa23.89■■□□□ 1.42
CCND1-204ENST00000539241 UACAQ9BZF9 1416 aa23.89■■□□□ 1.41
CCND1-204ENST00000539241 UHRF1BP1LA0JNW5 1464 aa23.88■■□□□ 1.41
CCND1-204ENST00000539241 ASXL2Q76L83 1435 aa23.84■■□□□ 1.41
CCND1-204ENST00000539241 PLB1Q6P1J6 1458 aa23.83■■□□□ 1.41
CCND1-204ENST00000539241 KIAA0556O60303 1618 aa23.81■■□□□ 1.4
CCND1-204ENST00000539241 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
CCND1-204ENST00000539241 KDM5BQ9UGL1 1544 aa23.77■■□□□ 1.4
CCND1-204ENST00000539241 KDM6BO15054 1643 aa23.77■■□□□ 1.4
CCND1-204ENST00000539241 TSPOAP1O95153 1857 aa23.75■■□□□ 1.39
CCND1-204ENST00000539241 GLI2P10070 1586 aa23.74■■□□□ 1.39
CCND1-204ENST00000539241 GOLGA3Q08378 1498 aa23.72■■□□□ 1.39
CCND1-204ENST00000539241 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.38
CCND1-204ENST00000539241 EPRSP07814 1512 aaKnown RBP23.69■■□□□ 1.38
CCND1-204ENST00000539241 ZCCHC11Q5TAX3 1644 aaKnown RBP23.67■■□□□ 1.38
CCND1-204ENST00000539241 PPRC1Q5VV67 1664 aaKnown RBP23.63■■□□□ 1.37
CCND1-204ENST00000539241 CSRNP3Q8WYN3 585 aa23.62■■□□□ 1.37
CCND1-204ENST00000539241 WDR7Q9Y4E6 1490 aa23.62■■□□□ 1.37
CCND1-204ENST00000539241 ABCA8O94911 1581 aa23.6■■□□□ 1.37
CCND1-204ENST00000539241 MAP3K4Q9Y6R4 1608 aa23.58■■□□□ 1.36
CCND1-204ENST00000539241 TEX14Q8IWB6 1497 aa23.57■■□□□ 1.36
CCND1-204ENST00000539241 KDM4FA0A1W2PPD8 638 aa23.57■■□□□ 1.36
CCND1-204ENST00000539241 P3H3Q8IVL6 736 aa23.55■■□□□ 1.36
CCND1-204ENST00000539241 COL17A1Q9UMD9 1497 aaPredicted RBP23.55■■□□□ 1.36
CCND1-204ENST00000539241 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
CCND1-204ENST00000539241 KCNH8Q96L42 1107 aa23.52■■□□□ 1.36
CCND1-204ENST00000539241 EEA1Q15075 1411 aa23.51■■□□□ 1.35
CCND1-204ENST00000539241 CD109Q6YHK3 1445 aa23.49■■□□□ 1.35
CCND1-204ENST00000539241 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
CCND1-204ENST00000539241 MAGI3Q5TCQ9 1506 aa23.44■■□□□ 1.34
CCND1-204ENST00000539241 ATP10BO94823 1461 aa23.43■■□□□ 1.34
CCND1-204ENST00000539241 SAMD9Q5K651 1589 aa23.43■■□□□ 1.34
CCND1-204ENST00000539241 CFAP43Q8NDM7 1665 aa23.4■■□□□ 1.34
CCND1-204ENST00000539241 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.33
CCND1-204ENST00000539241 ADGRL1O94910 1474 aa23.37■■□□□ 1.33
CCND1-204ENST00000539241 FHOD3Q2V2M9 1422 aa23.34■■□□□ 1.33
CCND1-204ENST00000539241 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.32
CCND1-204ENST00000539241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
CCND1-204ENST00000539241 HNRNPUL2Q1KMD3 747 aaKnown RBP23.32■■□□□ 1.32
CCND1-204ENST00000539241 NUP153P49790 1475 aaKnown RBP23.29■■□□□ 1.32
CCND1-204ENST00000539241 KIF21BO75037 1637 aa23.27■■□□□ 1.32
CCND1-204ENST00000539241 ARAP3Q8WWN8 1544 aa23.25■■□□□ 1.31
CCND1-204ENST00000539241 ABCA9Q8IUA7 1624 aa23.25■■□□□ 1.31
CCND1-204ENST00000539241 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
CCND1-204ENST00000539241 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
CCND1-204ENST00000539241 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
CCND1-204ENST00000539241 PLEKHD1A6NEE1 506 aa23.2■■□□□ 1.3
CCND1-204ENST00000539241 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
CCND1-204ENST00000539241 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
CCND1-204ENST00000539241 NEO1Q92859 1461 aa23.17■■□□□ 1.3
CCND1-204ENST00000539241 RAPGEF3O95398 923 aa23.15■■□□□ 1.3
CCND1-204ENST00000539241 ILDR1Q86SU0 546 aaPredicted RBP23.13■■□□□ 1.29
CCND1-204ENST00000539241 CDK13Q14004 1512 aaKnown RBP23.07■■□□□ 1.28
CCND1-204ENST00000539241 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
CCND1-204ENST00000539241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCND1-204ENST00000539241 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
CCND1-204ENST00000539241 AKNAQ7Z591 1439 aa23.04■■□□□ 1.28
CCND1-204ENST00000539241 FRMPD1Q5SYB0 1578 aa23.04■■□□□ 1.28
CCND1-204ENST00000539241 ATP1B4Q9UN42 357 aaPredicted RBP23.03■■□□□ 1.28
CCND1-204ENST00000539241 FANCAO15360 1455 aa23.03■■□□□ 1.28
CCND1-204ENST00000539241 DENND4BO75064 1496 aaPredicted RBP23.03■■□□□ 1.28
CCND1-204ENST00000539241 HECW2Q9P2P5 1572 aa23.01■■□□□ 1.27
CCND1-204ENST00000539241 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
CCND1-204ENST00000539241 ARID4BQ4LE39 1312 aaPredicted RBP22.97■■□□□ 1.27
CCND1-204ENST00000539241 CFAP74Q9C0B2 1584 aa22.97■■□□□ 1.27
CCND1-204ENST00000539241 HECW1Q76N89 1606 aa22.97■■□□□ 1.27
CCND1-204ENST00000539241 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
CCND1-204ENST00000539241 ARHGEF40Q8TER5 1519 aa22.94■■□□□ 1.26
CCND1-204ENST00000539241 PLCH2O75038 1416 aa22.94■■□□□ 1.26
CCND1-204ENST00000539241 PTPRMP28827 1452 aa22.92■■□□□ 1.26
CCND1-204ENST00000539241 ADAMTSL3P82987 1691 aa22.92■■□□□ 1.26
CCND1-204ENST00000539241 RICTORQ6R327 1708 aa22.91■■□□□ 1.26
CCND1-204ENST00000539241 SCAPERQ9BY12 1400 aa22.89■■□□□ 1.25
CCND1-204ENST00000539241 ZMYM4Q5VZL5 1548 aa22.88■■□□□ 1.25
CCND1-204ENST00000539241 TROQ12816 1431 aaPredicted RBP22.88■■□□□ 1.25
CCND1-204ENST00000539241 BCORL1Q5H9F3 1711 aa22.88■■□□□ 1.25
CCND1-204ENST00000539241 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
CCND1-204ENST00000539241 POGZQ7Z3K3 1410 aa22.86■■□□□ 1.25
CCND1-204ENST00000539241 YEATS2Q9ULM3 1422 aa22.86■■□□□ 1.25
CCND1-204ENST00000539241 MAGI2Q86UL8 1455 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms