RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 NISCHQ9Y2I1 1504 aa34.88■■■■□ 3.17
CCND1-204ENST00000539241 ABCC9O60706 1549 aa31.22■■■□□ 2.59
CCND1-204ENST00000539241 CCDC180Q9P1Z9 1646 aa31.19■■■□□ 2.58
CCND1-204ENST00000539241 RB1CC1Q8TDY2 1594 aa29.71■■■□□ 2.35
CCND1-204ENST00000539241 NACADO15069 1562 aa29.53■■■□□ 2.32
CCND1-204ENST00000539241 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
CCND1-204ENST00000539241 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
CCND1-204ENST00000539241 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
CCND1-204ENST00000539241 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.25
CCND1-204ENST00000539241 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
CCND1-204ENST00000539241 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
CCND1-204ENST00000539241 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
CCND1-204ENST00000539241 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
CCND1-204ENST00000539241 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
CCND1-204ENST00000539241 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
CCND1-204ENST00000539241 CC2D2AQ9P2K1 1620 aa28.16■■■□□ 2.1
CCND1-204ENST00000539241 EIF4G1Q04637 1599 aaKnown RBP28.14■■■□□ 2.1
CCND1-204ENST00000539241 CECR2Q9BXF3 1484 aa28.13■■■□□ 2.09
CCND1-204ENST00000539241 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
CCND1-204ENST00000539241 ATAD2BQ9ULI0 1458 aa27.23■■□□□ 1.95
CCND1-204ENST00000539241 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
CCND1-204ENST00000539241 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
CCND1-204ENST00000539241 HMGXB3Q12766 1538 aa27.07■■□□□ 1.92
CCND1-204ENST00000539241 BAZ1AQ9NRL2 1556 aaPredicted RBP27.06■■□□□ 1.92
CCND1-204ENST00000539241 DNAJC5Q9H3Z4 198 aa27.05■■□□□ 1.92
CCND1-204ENST00000539241 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
CCND1-204ENST00000539241 BAZ1BQ9UIG0 1483 aaKnown RBP26.96■■□□□ 1.91
CCND1-204ENST00000539241 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
CCND1-204ENST00000539241 CUX2O14529 1486 aa26.88■■□□□ 1.89
CCND1-204ENST00000539241 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
CCND1-204ENST00000539241 NESP48681 1621 aa26.83■■□□□ 1.89
CCND1-204ENST00000539241 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
CCND1-204ENST00000539241 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
CCND1-204ENST00000539241 WIZO95785 1651 aa26.51■■□□□ 1.83
CCND1-204ENST00000539241 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
CCND1-204ENST00000539241 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
CCND1-204ENST00000539241 KIF21AQ7Z4S6 1674 aa26.4■■□□□ 1.82
CCND1-204ENST00000539241 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
CCND1-204ENST00000539241 MRC2Q9UBG0 1479 aa26.28■■□□□ 1.8
CCND1-204ENST00000539241 TOP2AP11388 1531 aaKnown RBP26.22■■□□□ 1.79
CCND1-204ENST00000539241 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
CCND1-204ENST00000539241 WDR62O43379 1518 aa26.19■■□□□ 1.78
CCND1-204ENST00000539241 CFTRP13569 1480 aa26.18■■□□□ 1.78
CCND1-204ENST00000539241 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
CCND1-204ENST00000539241 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
CCND1-204ENST00000539241 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
CCND1-204ENST00000539241 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
CCND1-204ENST00000539241 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
CCND1-204ENST00000539241 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
CCND1-204ENST00000539241 IFT140Q96RY7 1462 aa25.67■■□□□ 1.7
CCND1-204ENST00000539241 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
CCND1-204ENST00000539241 ZNF608Q9ULD9 1512 aaPredicted RBP25.62■■□□□ 1.69
CCND1-204ENST00000539241 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
CCND1-204ENST00000539241 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
CCND1-204ENST00000539241 EIF4G3O43432 1585 aaKnown RBP25.43■■□□□ 1.66
CCND1-204ENST00000539241 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
CCND1-204ENST00000539241 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.666e-10■■■■□ 19.8
CCND1-204ENST00000539241 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
CCND1-204ENST00000539241 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
CCND1-204ENST00000539241 SOGA1O94964 1423 aa25.32■■□□□ 1.64
CCND1-204ENST00000539241 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
CCND1-204ENST00000539241 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
CCND1-204ENST00000539241 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
CCND1-204ENST00000539241 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
CCND1-204ENST00000539241 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
CCND1-204ENST00000539241 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
CCND1-204ENST00000539241 FBLN2P98095 1184 aa25.25■■□□□ 1.63
CCND1-204ENST00000539241 ARHGEF11O15085 1522 aa25.25■■□□□ 1.63
CCND1-204ENST00000539241 CUX1P39880 1505 aa25.25■■□□□ 1.63
CCND1-204ENST00000539241 CHD1O14646 1710 aa25.17■■□□□ 1.62
CCND1-204ENST00000539241 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
CCND1-204ENST00000539241 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
CCND1-204ENST00000539241 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
CCND1-204ENST00000539241 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
CCND1-204ENST00000539241 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
CCND1-204ENST00000539241 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
CCND1-204ENST00000539241 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
CCND1-204ENST00000539241 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
CCND1-204ENST00000539241 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
CCND1-204ENST00000539241 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
CCND1-204ENST00000539241 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
CCND1-204ENST00000539241 SYNJ1O43426 1573 aa24.96■■□□□ 1.59
CCND1-204ENST00000539241 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
CCND1-204ENST00000539241 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
CCND1-204ENST00000539241 PBRM1Q86U86 1689 aa24.89■■□□□ 1.58
CCND1-204ENST00000539241 TOP2BQ02880 1626 aa24.83■■□□□ 1.57
CCND1-204ENST00000539241 BIVM-ERCC5R4GMW8 1640 aa24.81■■□□□ 1.56
CCND1-204ENST00000539241 TRHP20396 242 aaPredicted RBP24.8■■□□□ 1.56
CCND1-204ENST00000539241 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
CCND1-204ENST00000539241 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
CCND1-204ENST00000539241 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.55
CCND1-204ENST00000539241 NUP160Q12769 1436 aa24.69■■□□□ 1.54
CCND1-204ENST00000539241 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
CCND1-204ENST00000539241 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
CCND1-204ENST00000539241 ERCC6L2Q5T890 1561 aa24.58■■□□□ 1.52
CCND1-204ENST00000539241 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
CCND1-204ENST00000539241 JPH4Q96JJ6 628 aa24.46■■□□□ 1.51
CCND1-204ENST00000539241 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
CCND1-204ENST00000539241 KIF27Q86VH2 1401 aa24.41■■□□□ 1.5
CCND1-204ENST00000539241 IGF1RP08069 1367 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms