RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 ADAMTS12P58397 1594 aa22■■□□□ 1.11
YBX3-207ENST00000539204 MAPKBP1O60336 1514 aa21.89■■□□□ 1.09
YBX3-207ENST00000539204 ERICH3Q5RHP9 1530 aa21.88■■□□□ 1.09
YBX3-207ENST00000539204 KDM6BO15054 1643 aa21.88■■□□□ 1.09
YBX3-207ENST00000539204 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
YBX3-207ENST00000539204 TOP2BQ02880 1626 aa21.77■■□□□ 1.07
YBX3-207ENST00000539204 ADCY10Q96PN6 1610 aa21.77■■□□□ 1.07
YBX3-207ENST00000539204 TSPOAP1O95153 1857 aa21.76■■□□□ 1.07
YBX3-207ENST00000539204 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
YBX3-207ENST00000539204 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.07
YBX3-207ENST00000539204 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
YBX3-207ENST00000539204 ADGRL1O94910 1474 aa21.65■■□□□ 1.06
YBX3-207ENST00000539204 TTBK1Q5TCY1 1321 aaPredicted RBP21.65■■□□□ 1.06
YBX3-207ENST00000539204 KIAA0586Q9BVV6 1533 aa21.65■■□□□ 1.06
YBX3-207ENST00000539204 PTPRGP23470 1445 aa21.64■■□□□ 1.06
YBX3-207ENST00000539204 PLB1Q6P1J6 1458 aa21.57■■□□□ 1.04
YBX3-207ENST00000539204 ASXL2Q76L83 1435 aa21.56■■□□□ 1.04
YBX3-207ENST00000539204 HECW2Q9P2P5 1572 aa21.54■■□□□ 1.04
YBX3-207ENST00000539204 IGF1RP08069 1367 aa21.54■■□□□ 1.04
YBX3-207ENST00000539204 ABCC2Q92887 1545 aa21.54■■□□□ 1.04
YBX3-207ENST00000539204 GLI2P10070 1586 aa21.53■■□□□ 1.04
YBX3-207ENST00000539204 TNIKQ9UKE5 1360 aa21.52■■□□□ 1.04
YBX3-207ENST00000539204 COL17A1Q9UMD9 1497 aaPredicted RBP21.51■■□□□ 1.03
YBX3-207ENST00000539204 CARMIL2Q6F5E8 1435 aa21.5■■□□□ 1.03
YBX3-207ENST00000539204 PPRC1Q5VV67 1664 aaKnown RBP21.47■■□□□ 1.03
YBX3-207ENST00000539204 FBXO41Q8TF61 875 aa21.47■■□□□ 1.03
YBX3-207ENST00000539204 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
YBX3-207ENST00000539204 UHRF1BP1LA0JNW5 1464 aa21.42■■□□□ 1.02
YBX3-207ENST00000539204 TEX14Q8IWB6 1497 aa21.42■■□□□ 1.02
YBX3-207ENST00000539204 UACAQ9BZF9 1416 aa21.42■■□□□ 1.02
YBX3-207ENST00000539204 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
YBX3-207ENST00000539204 CARMIL1Q5VZK9 1371 aa21.38■■□□□ 1.01
YBX3-207ENST00000539204 CUL7Q14999 1698 aa21.38■■□□□ 1.01
YBX3-207ENST00000539204 MAP3K4Q9Y6R4 1608 aa21.33■■□□□ 1.01
YBX3-207ENST00000539204 KDM5BQ9UGL1 1544 aa21.33■■□□□ 1
YBX3-207ENST00000539204 IQGAP2Q13576 1575 aa21.27■□□□□ 0.99
YBX3-207ENST00000539204 DISP1Q96F81 1524 aa21.25■□□□□ 0.99
YBX3-207ENST00000539204 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
YBX3-207ENST00000539204 CD109Q6YHK3 1445 aa21.22■□□□□ 0.99
YBX3-207ENST00000539204 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
YBX3-207ENST00000539204 WDR7Q9Y4E6 1490 aa21.21■□□□□ 0.99
YBX3-207ENST00000539204 MAGI3Q5TCQ9 1506 aa21.18■□□□□ 0.98
YBX3-207ENST00000539204 UGGT2Q9NYU1 1516 aa21.13■□□□□ 0.97
YBX3-207ENST00000539204 PTPRMP28827 1452 aa21.08■□□□□ 0.97
YBX3-207ENST00000539204 CFAP43Q8NDM7 1665 aa21.08■□□□□ 0.96
YBX3-207ENST00000539204 KIF21BO75037 1637 aa21.07■□□□□ 0.96
YBX3-207ENST00000539204 KIAA0556O60303 1618 aa21.07■□□□□ 0.96
YBX3-207ENST00000539204 RAPGEF2Q9Y4G8 1499 aa21.06■□□□□ 0.96
YBX3-207ENST00000539204 ARAP3Q8WWN8 1544 aa21.04■□□□□ 0.96
YBX3-207ENST00000539204 LMTK3Q96Q04 1460 aa21.03■□□□□ 0.96
YBX3-207ENST00000539204 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.95
YBX3-207ENST00000539204 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
YBX3-207ENST00000539204 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
YBX3-207ENST00000539204 RAPGEF3O95398 923 aa20.99■□□□□ 0.95
YBX3-207ENST00000539204 ADAMTSL3P82987 1691 aa20.97■□□□□ 0.95
YBX3-207ENST00000539204 GOLGA3Q08378 1498 aa20.96■□□□□ 0.95
YBX3-207ENST00000539204 ABCA8O94911 1581 aa20.94■□□□□ 0.94
YBX3-207ENST00000539204 PCF11O94913 1555 aaKnown RBP20.94■□□□□ 0.94
YBX3-207ENST00000539204 ARID3CA6NKF2 412 aa20.93■□□□□ 0.94
YBX3-207ENST00000539204 CERKQ8TCT0 537 aa20.93■□□□□ 0.94
YBX3-207ENST00000539204 HSPA2P54652 639 aa20.91■□□□□ 0.94
YBX3-207ENST00000539204 SOCS7O14512 581 aa20.87■□□□□ 0.93
YBX3-207ENST00000539204 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
YBX3-207ENST00000539204 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
YBX3-207ENST00000539204 ILDR2Q71H61 639 aa20.85■□□□□ 0.93
YBX3-207ENST00000539204 ATP10BO94823 1461 aa20.85■□□□□ 0.93
YBX3-207ENST00000539204 MADDQ8WXG6 1647 aa20.84■□□□□ 0.93
YBX3-207ENST00000539204 DISP3Q9P2K9 1392 aa20.84■□□□□ 0.93
YBX3-207ENST00000539204 NEO1Q92859 1461 aa20.83■□□□□ 0.93
YBX3-207ENST00000539204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
YBX3-207ENST00000539204 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
YBX3-207ENST00000539204 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
YBX3-207ENST00000539204 ABCA9Q8IUA7 1624 aa20.79■□□□□ 0.92
YBX3-207ENST00000539204 CTTNBP2Q8WZ74 1663 aa20.78■□□□□ 0.92
YBX3-207ENST00000539204 RIMS1Q86UR5 1692 aaKnown RBP20.74■□□□□ 0.91
YBX3-207ENST00000539204 POGZQ7Z3K3 1410 aa20.74■□□□□ 0.91
YBX3-207ENST00000539204 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
YBX3-207ENST00000539204 MLECQ14165 292 aa20.71■□□□□ 0.91
YBX3-207ENST00000539204 FRMPD1Q5SYB0 1578 aa20.7■□□□□ 0.9
YBX3-207ENST00000539204 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
YBX3-207ENST00000539204 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
YBX3-207ENST00000539204 PLEKHD1A6NEE1 506 aa20.67■□□□□ 0.9
YBX3-207ENST00000539204 FANCAO15360 1455 aa20.67■□□□□ 0.9
YBX3-207ENST00000539204 PRXQ9BXM0 1461 aa20.65■□□□□ 0.9
YBX3-207ENST00000539204 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
YBX3-207ENST00000539204 ARHGEF40Q8TER5 1519 aa20.64■□□□□ 0.9
YBX3-207ENST00000539204 YEATS2Q9ULM3 1422 aa20.6■□□□□ 0.89
YBX3-207ENST00000539204 RAPGEF6Q8TEU7 1601 aa20.58■□□□□ 0.89
YBX3-207ENST00000539204 RICTORQ6R327 1708 aa20.58■□□□□ 0.88
YBX3-207ENST00000539204 MAGI2Q86UL8 1455 aa20.57■□□□□ 0.88
YBX3-207ENST00000539204 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
YBX3-207ENST00000539204 ZFYVE16Q7Z3T8 1539 aa20.55■□□□□ 0.88
YBX3-207ENST00000539204 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
YBX3-207ENST00000539204 NUP153P49790 1475 aaKnown RBP20.54■□□□□ 0.88
YBX3-207ENST00000539204 ZMYM4Q5VZL5 1548 aa20.52■□□□□ 0.87
YBX3-207ENST00000539204 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
YBX3-207ENST00000539204 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
YBX3-207ENST00000539204 CFAP74Q9C0B2 1584 aa20.51■□□□□ 0.87
YBX3-207ENST00000539204 FER1L4A9Z1Z3 1794 aa20.5■□□□□ 0.87
YBX3-207ENST00000539204 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms