RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 GOLGA3Q08378 1498 aa5.75□□□□□ -1.49
PTPN22-211ENST00000538253 RAPGEF2Q9Y4G8 1499 aa5.75□□□□□ -1.49
PTPN22-211ENST00000538253 GRIN2AQ12879 1464 aa5.73□□□□□ -1.49
PTPN22-211ENST00000538253 IGF1RP08069 1367 aa5.73□□□□□ -1.49
PTPN22-211ENST00000538253 ZNF608Q9ULD9 1512 aaPredicted RBP5.73□□□□□ -1.49
PTPN22-211ENST00000538253 NPM1P06748 294 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPN22-211ENST00000538253 ADAMTS12P58397 1594 aa5.72□□□□□ -1.49
PTPN22-211ENST00000538253 KIAA0586Q9BVV6 1533 aa5.72□□□□□ -1.49
PTPN22-211ENST00000538253 NUP160Q12769 1436 aa5.71□□□□□ -1.5
PTPN22-211ENST00000538253 PBRM1Q86U86 1689 aa5.7□□□□□ -1.5
PTPN22-211ENST00000538253 APLP2Q06481 763 aa5.68□□□□□ -1.5
PTPN22-211ENST00000538253 UBTFP17480 764 aaKnown RBP5.68□□□□□ -1.5
PTPN22-211ENST00000538253 PRXQ9BXM0 1461 aa5.68□□□□□ -1.5
PTPN22-211ENST00000538253 JPH4Q96JJ6 628 aa5.67□□□□□ -1.5
PTPN22-211ENST00000538253 KIF21BO75037 1637 aa5.67□□□□□ -1.5
PTPN22-211ENST00000538253 TNIKQ9UKE5 1360 aa5.66□□□□□ -1.5
PTPN22-211ENST00000538253 CDK11AQ9UQ88 783 aaPredicted RBP5.66□□□□□ -1.5
PTPN22-211ENST00000538253 EFCAB5A4FU69 1503 aa5.66□□□□□ -1.5
PTPN22-211ENST00000538253 IQGAP2Q13576 1575 aa5.65□□□□□ -1.51
PTPN22-211ENST00000538253 CLASP1Q7Z460 1538 aa5.64□□□□□ -1.51
PTPN22-211ENST00000538253 PTPRGP23470 1445 aa5.64□□□□□ -1.51
PTPN22-211ENST00000538253 UGGT2Q9NYU1 1516 aa5.64□□□□□ -1.51
PTPN22-211ENST00000538253 PRG4Q92954 1404 aaPredicted RBP5.64□□□□□ -1.51
PTPN22-211ENST00000538253 FMN1Q68DA7 1419 aa5.63□□□□□ -1.51
PTPN22-211ENST00000538253 ERICH6Q7L0X2 663 aa5.63□□□□□ -1.51
PTPN22-211ENST00000538253 CHD1O14646 1710 aa5.63□□□□□ -1.51
PTPN22-211ENST00000538253 DAXXQ9UER7 740 aaPredicted RBP5.61□□□□□ -1.51
PTPN22-211ENST00000538253 ARHGEF11O15085 1522 aa5.61□□□□□ -1.51
PTPN22-211ENST00000538253 RUSC2Q8N2Y8 1516 aa5.6□□□□□ -1.51
PTPN22-211ENST00000538253 UHRF1BP1LA0JNW5 1464 aa5.6□□□□□ -1.51
PTPN22-211ENST00000538253 CEP170Q5SW79 1584 aa5.6□□□□□ -1.51
PTPN22-211ENST00000538253 SHROOM2Q13796 1616 aa5.6□□□□□ -1.51
PTPN22-211ENST00000538253 UACAQ9BZF9 1416 aa5.59□□□□□ -1.51
PTPN22-211ENST00000538253 PLB1Q6P1J6 1458 aa5.59□□□□□ -1.52
PTPN22-211ENST00000538253 PHLDB1Q86UU1 1377 aa5.58□□□□□ -1.52
PTPN22-211ENST00000538253 CTTNBP2Q8WZ74 1663 aa5.58□□□□□ -1.52
PTPN22-211ENST00000538253 CLIP1P30622 1438 aa5.57□□□□□ -1.52
PTPN22-211ENST00000538253 PLEKHD1A6NEE1 506 aa5.57□□□□□ -1.52
PTPN22-211ENST00000538253 CYB5RLQ6IPT4 315 aa5.57□□□□□ -1.52
PTPN22-211ENST00000538253 CCDC18Q5T9S5 1454 aa5.56□□□□□ -1.52
PTPN22-211ENST00000538253 KIAA0556O60303 1618 aa5.55□□□□□ -1.52
PTPN22-211ENST00000538253 RIMBP3CA6NJZ7 1639 aa5.55□□□□□ -1.52
PTPN22-211ENST00000538253 RIMBP3BA6NNM3 1639 aa5.55□□□□□ -1.52
PTPN22-211ENST00000538253 RIMBP3Q9UFD9 1639 aa5.55□□□□□ -1.52
PTPN22-211ENST00000538253 ABCC2Q92887 1545 aa5.55□□□□□ -1.52
PTPN22-211ENST00000538253 ACIN1Q9UKV3 1341 aaKnown RBP5.55□□□□□ -1.52
PTPN22-211ENST00000538253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.55□□□□□ -1.52
PTPN22-211ENST00000538253 HNRNPUL2Q1KMD3 747 aaKnown RBP5.55□□□□□ -1.52
PTPN22-211ENST00000538253 TEX14Q8IWB6 1497 aa5.53□□□□□ -1.52
PTPN22-211ENST00000538253 ARAP1Q96P48 1450 aa5.53□□□□□ -1.52
PTPN22-211ENST00000538253 HECW1Q76N89 1606 aa5.53□□□□□ -1.52
PTPN22-211ENST00000538253 SAMD9Q5K651 1589 aa5.52□□□□□ -1.53
PTPN22-211ENST00000538253 CASKIN1Q8WXD9 1431 aa5.52□□□□□ -1.53
PTPN22-211ENST00000538253 MAPKBP1O60336 1514 aa5.52□□□□□ -1.53
PTPN22-211ENST00000538253 DISP1Q96F81 1524 aa5.52□□□□□ -1.53
PTPN22-211ENST00000538253 FYCO1Q9BQS8 1478 aa5.52□□□□□ -1.53
PTPN22-211ENST00000538253 KDM5BQ9UGL1 1544 aa5.51□□□□□ -1.53
PTPN22-211ENST00000538253 TRHP20396 242 aaPredicted RBP5.51□□□□□ -1.53
PTPN22-211ENST00000538253 CEP162Q5TB80 1403 aa5.51□□□□□ -1.53
PTPN22-211ENST00000538253 ATP1B4Q9UN42 357 aaPredicted RBP5.51□□□□□ -1.53
PTPN22-211ENST00000538253 RSPH4AQ5TD94 716 aa5.5□□□□□ -1.53
PTPN22-211ENST00000538253 MAP3K1Q13233 1512 aa5.5□□□□□ -1.53
PTPN22-211ENST00000538253 VPS8Q8N3P4 1428 aa5.49□□□□□ -1.53
PTPN22-211ENST00000538253 ABCA8O94911 1581 aa5.49□□□□□ -1.53
PTPN22-211ENST00000538253 PLEKHH2Q8IVE3 1493 aa5.49□□□□□ -1.53
PTPN22-211ENST00000538253 MTUS2Q5JR59 1369 aa5.49□□□□□ -1.53
PTPN22-211ENST00000538253 WDR7Q9Y4E6 1490 aa5.49□□□□□ -1.53
PTPN22-211ENST00000538253 RAPGEF6Q8TEU7 1601 aa5.49□□□□□ -1.53
PTPN22-211ENST00000538253 FHOD3Q2V2M9 1422 aa5.48□□□□□ -1.53
PTPN22-211ENST00000538253 EFCAB2Q5VUJ9 269 aa5.48□□□□□ -1.53
PTPN22-211ENST00000538253 GLI2P10070 1586 aa5.48□□□□□ -1.53
PTPN22-211ENST00000538253 ARHGAP35Q9NRY4 1499 aa5.48□□□□□ -1.53
PTPN22-211ENST00000538253 ABCC10Q5T3U5 1492 aa5.48□□□□□ -1.53
PTPN22-211ENST00000538253 ILDR1Q86SU0 546 aaPredicted RBP5.47□□□□□ -1.53
PTPN22-211ENST00000538253 TROQ12816 1431 aaPredicted RBP5.47□□□□□ -1.53
PTPN22-211ENST00000538253 P3H3Q8IVL6 736 aa5.47□□□□□ -1.53
PTPN22-211ENST00000538253 CFAP74Q9C0B2 1584 aa5.47□□□□□ -1.53
PTPN22-211ENST00000538253 FAM69CQ0P6D2 419 aa5.47□□□□□ -1.53
PTPN22-211ENST00000538253 PLPPR3Q6T4P5 718 aa5.47□□□□□ -1.53
PTPN22-211ENST00000538253 ASXL2Q76L83 1435 aa5.47□□□□□ -1.53
PTPN22-211ENST00000538253 RANGAP1P46060 587 aaPredicted RBP5.46□□□□□ -1.53
PTPN22-211ENST00000538253 ARAP3Q8WWN8 1544 aa5.46□□□□□ -1.54
PTPN22-211ENST00000538253 NEO1Q92859 1461 aa5.46□□□□□ -1.54
PTPN22-211ENST00000538253 EHBP1L1Q8N3D4 1523 aa5.45□□□□□ -1.54
PTPN22-211ENST00000538253 EPRSP07814 1512 aaKnown RBP5.45□□□□□ -1.54
PTPN22-211ENST00000538253 MAGI3Q5TCQ9 1506 aa5.45□□□□□ -1.54
PTPN22-211ENST00000538253 CCNB3Q8WWL7 1395 aa5.45□□□□□ -1.54
PTPN22-211ENST00000538253 BCL11AQ9H165 835 aa5.45□□□□□ -1.54
PTPN22-211ENST00000538253 CD109Q6YHK3 1445 aa5.44□□□□□ -1.54
PTPN22-211ENST00000538253 ATP10BO94823 1461 aa5.44□□□□□ -1.54
PTPN22-211ENST00000538253 KIF14Q15058 1648 aa5.44□□□□□ -1.54
PTPN22-211ENST00000538253 NUP153P49790 1475 aaKnown RBP5.43□□□□□ -1.54
PTPN22-211ENST00000538253 PPP6R1Q9UPN7 881 aa5.42□□□□□ -1.54
PTPN22-211ENST00000538253 CFAP43Q8NDM7 1665 aa5.42□□□□□ -1.54
PTPN22-211ENST00000538253 ADCY10Q96PN6 1610 aa5.42□□□□□ -1.54
PTPN22-211ENST00000538253 KCNH8Q96L42 1107 aa5.42□□□□□ -1.54
PTPN22-211ENST00000538253 POGZQ7Z3K3 1410 aa5.42□□□□□ -1.54
PTPN22-211ENST00000538253 MIA2Q96PC5 1412 aa5.42□□□□□ -1.54
PTPN22-211ENST00000538253 EHMT2Q96KQ7 1210 aa5.41□□□□□ -1.54
PTPN22-211ENST00000538253 CFDP1Q9UEE9 299 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms