RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 RAPGEF2Q9Y4G8 1499 aa38.69■■■■□ 3.78
CLTA-209ENST00000538225 SHROOM2Q13796 1616 aa38.68■■■■□ 3.78
CLTA-209ENST00000538225 ERCC6L2Q5T890 1561 aa38.66■■■■□ 3.78
CLTA-209ENST00000538225 KIAA0586Q9BVV6 1533 aa38.66■■■■□ 3.78
CLTA-209ENST00000538225 PRG4Q92954 1404 aaPredicted RBP38.61■■■■□ 3.77
CLTA-209ENST00000538225 CSRNP3Q8WYN3 585 aa38.58■■■■□ 3.77
CLTA-209ENST00000538225 FAM9AQ8IZU1 332 aaPredicted RBP38.55■■■■□ 3.76
CLTA-209ENST00000538225 PRXQ9BXM0 1461 aa38.54■■■■□ 3.76
CLTA-209ENST00000538225 EEA1Q15075 1411 aa38.52■■■■□ 3.76
CLTA-209ENST00000538225 IQGAP2Q13576 1575 aa38.43■■■■□ 3.74
CLTA-209ENST00000538225 CARMIL2Q6F5E8 1435 aa38.27■■■■□ 3.72
CLTA-209ENST00000538225 CTTNBP2Q8WZ74 1663 aa38.27■■■■□ 3.72
CLTA-209ENST00000538225 UGGT2Q9NYU1 1516 aa38.22■■■■□ 3.71
CLTA-209ENST00000538225 TTBK1Q5TCY1 1321 aaPredicted RBP38.21■■■■□ 3.71
CLTA-209ENST00000538225 DISP1Q96F81 1524 aa38.17■■■■□ 3.7
CLTA-209ENST00000538225 PTPRGP23470 1445 aa38.15■■■■□ 3.7
CLTA-209ENST00000538225 TNIKQ9UKE5 1360 aa38.15■■■■□ 3.7
CLTA-209ENST00000538225 EHMT2Q96KQ7 1210 aa38.11■■■■□ 3.69
CLTA-209ENST00000538225 KIF21BO75037 1637 aa38.11■■■■□ 3.69
CLTA-209ENST00000538225 TRHP20396 242 aaPredicted RBP38.07■■■■□ 3.68
CLTA-209ENST00000538225 KIAA0556O60303 1618 aa38.05■■■■□ 3.68
CLTA-209ENST00000538225 GOLGA3Q08378 1498 aa38.02■■■■□ 3.68
CLTA-209ENST00000538225 RANGAP1P46060 587 aaPredicted RBP37.97■■■■□ 3.67
CLTA-209ENST00000538225 ADCY10Q96PN6 1610 aa37.97■■■■□ 3.67
CLTA-209ENST00000538225 NPM1P06748 294 aaKnown RBP eCLIP37.96■■■■□ 3.67
CLTA-209ENST00000538225 UBTFP17480 764 aaKnown RBP37.95■■■■□ 3.67
CLTA-209ENST00000538225 P3H3Q8IVL6 736 aa37.92■■■■□ 3.66
CLTA-209ENST00000538225 UACAQ9BZF9 1416 aa37.87■■■■□ 3.65
CLTA-209ENST00000538225 UHRF1BP1LA0JNW5 1464 aa37.79■■■■□ 3.64
CLTA-209ENST00000538225 SAMD9Q5K651 1589 aa37.78■■■■□ 3.64
CLTA-209ENST00000538225 ABCC2Q92887 1545 aa37.77■■■■□ 3.64
CLTA-209ENST00000538225 PLB1Q6P1J6 1458 aa37.75■■■■□ 3.63
CLTA-209ENST00000538225 MAPKBP1O60336 1514 aa37.7■■■■□ 3.63
CLTA-209ENST00000538225 ABCA8O94911 1581 aa37.65■■■■□ 3.62
CLTA-209ENST00000538225 FHOD3Q2V2M9 1422 aa37.65■■■■□ 3.62
CLTA-209ENST00000538225 EFCAB5A4FU69 1503 aa37.61■■■■□ 3.61
CLTA-209ENST00000538225 KDM5BQ9UGL1 1544 aa37.61■■■■□ 3.61
CLTA-209ENST00000538225 FAM69CQ0P6D2 419 aa37.58■■■■□ 3.61
CLTA-209ENST00000538225 ABCC10Q5T3U5 1492 aa37.57■■■■□ 3.6
CLTA-209ENST00000538225 ASXL2Q76L83 1435 aa37.55■■■■□ 3.6
CLTA-209ENST00000538225 ZCCHC11Q5TAX3 1644 aaKnown RBP37.55■■■■□ 3.6
CLTA-209ENST00000538225 KIF13AQ9H1H9 1805 aa37.52■■■■□ 3.6
CLTA-209ENST00000538225 ARID3CA6NKF2 412 aa37.52■■■■□ 3.6
CLTA-209ENST00000538225 DIP2BQ9P265 1576 aa37.48■■■■□ 3.59
CLTA-209ENST00000538225 ARHGAP35Q9NRY4 1499 aa37.48■■■■□ 3.59
CLTA-209ENST00000538225 RAPGEF6Q8TEU7 1601 aa37.45■■■■□ 3.59
CLTA-209ENST00000538225 ATP10BO94823 1461 aa37.39■■■■□ 3.58
CLTA-209ENST00000538225 WDR7Q9Y4E6 1490 aa37.34■■■■□ 3.57
CLTA-209ENST00000538225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.34■■■■□ 3.57
CLTA-209ENST00000538225 HNRNPUL2Q1KMD3 747 aaKnown RBP37.34■■■■□ 3.57
CLTA-209ENST00000538225 NUP153P49790 1475 aaKnown RBP37.33■■■■□ 3.57
CLTA-209ENST00000538225 EPRSP07814 1512 aaKnown RBP37.31■■■■□ 3.56
CLTA-209ENST00000538225 FMN1Q68DA7 1419 aa37.31■■■■□ 3.56
CLTA-209ENST00000538225 LOC105371045A0A1W2PR82 267 aa37.3■■■■□ 3.56
CLTA-209ENST00000538225 KCNH8Q96L42 1107 aa37.3■■■■□ 3.56
CLTA-209ENST00000538225 CLIP1P30622 1438 aa37.27■■■■□ 3.56
CLTA-209ENST00000538225 GLI2P10070 1586 aa37.27■■■■□ 3.56
CLTA-209ENST00000538225 ATP1B4Q9UN42 357 aaPredicted RBP37.27■■■■□ 3.56
CLTA-209ENST00000538225 TSPOAP1O95153 1857 aa37.22■■■■□ 3.55
CLTA-209ENST00000538225 HECW1Q76N89 1606 aa37.11■■■■□ 3.53
CLTA-209ENST00000538225 PLEKHD1A6NEE1 506 aa37.11■■■■□ 3.53
CLTA-209ENST00000538225 CEP162Q5TB80 1403 aa37.1■■■■□ 3.53
CLTA-209ENST00000538225 MAP3K4Q9Y6R4 1608 aa37.1■■■■□ 3.53
CLTA-209ENST00000538225 CDK13Q14004 1512 aaKnown RBP37.1■■■■□ 3.53
CLTA-209ENST00000538225 PPRC1Q5VV67 1664 aaKnown RBP37.04■■■■□ 3.52
CLTA-209ENST00000538225 CD109Q6YHK3 1445 aa37.03■■■■□ 3.52
CLTA-209ENST00000538225 CASKIN1Q8WXD9 1431 aa37.02■■■■□ 3.52
CLTA-209ENST00000538225 PCF11O94913 1555 aaKnown RBP37■■■■□ 3.51
CLTA-209ENST00000538225 CFAP43Q8NDM7 1665 aa36.99■■■■□ 3.51
CLTA-209ENST00000538225 TEX14Q8IWB6 1497 aa36.95■■■■□ 3.51
CLTA-209ENST00000538225 CDK11AQ9UQ88 783 aaPredicted RBP36.93■■■■□ 3.5
CLTA-209ENST00000538225 LRRIQ1Q96JM4 1722 aa36.92■■■■□ 3.5
CLTA-209ENST00000538225 ABCA9Q8IUA7 1624 aa36.92■■■■□ 3.5
CLTA-209ENST00000538225 FYCO1Q9BQS8 1478 aa36.91■■■■□ 3.5
CLTA-209ENST00000538225 KDM6BO15054 1643 aa36.91■■■■□ 3.5
CLTA-209ENST00000538225 MAGI3Q5TCQ9 1506 aa36.9■■■■□ 3.5
CLTA-209ENST00000538225 CCDC18Q5T9S5 1454 aa36.85■■■■□ 3.49
CLTA-209ENST00000538225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.8■■■■□ 3.484e-8■■□□□ 13.7
CLTA-209ENST00000538225 TROQ12816 1431 aaPredicted RBP36.77■■■■□ 3.48
CLTA-209ENST00000538225 COL17A1Q9UMD9 1497 aaPredicted RBP36.77■■■■□ 3.48
CLTA-209ENST00000538225 TTC37Q6PGP7 1564 aa36.74■■■■□ 3.47
CLTA-209ENST00000538225 KIF14Q15058 1648 aa36.69■■■■□ 3.46
CLTA-209ENST00000538225 VPS8Q8N3P4 1428 aa36.64■■■■□ 3.46
CLTA-209ENST00000538225 NEO1Q92859 1461 aa36.62■■■■□ 3.45
CLTA-209ENST00000538225 PHLDB1Q86UU1 1377 aa36.62■■■■□ 3.45
CLTA-209ENST00000538225 PLCH2O75038 1416 aa36.59■■■■□ 3.45
CLTA-209ENST00000538225 FANCAO15360 1455 aa36.59■■■■□ 3.45
CLTA-209ENST00000538225 ARAP3Q8WWN8 1544 aa36.59■■■■□ 3.45
CLTA-209ENST00000538225 MTUS2Q5JR59 1369 aa36.54■■■■□ 3.44
CLTA-209ENST00000538225 AKNAQ7Z591 1439 aa36.54■■■■□ 3.44
CLTA-209ENST00000538225 MYO5CQ9NQX4 1742 aa36.53■■■■□ 3.44
CLTA-209ENST00000538225 RAPGEF3O95398 923 aa36.51■■■■□ 3.44
CLTA-209ENST00000538225 CFAP74Q9C0B2 1584 aa36.5■■■■□ 3.43
CLTA-209ENST00000538225 EFCAB2Q5VUJ9 269 aa36.5■■■■□ 3.43
CLTA-209ENST00000538225 ARHGAP5Q13017 1502 aa36.44■■■■□ 3.42
CLTA-209ENST00000538225 DENND4BO75064 1496 aaPredicted RBP36.41■■■■□ 3.42
CLTA-209ENST00000538225 TIAM1Q13009 1591 aa36.4■■■■□ 3.42
CLTA-209ENST00000538225 EHBP1L1Q8N3D4 1523 aa36.39■■■■□ 3.42
CLTA-209ENST00000538225 ADGRL1O94910 1474 aa36.39■■■■□ 3.42
CLTA-209ENST00000538225 SCAPERQ9BY12 1400 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms