RNA–Protein interactions for RNA: ENST00000537882.2

NDRG1-229, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2 BASIC

Gene NDRG1, Length 2,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-229ENST00000537882 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
NDRG1-229ENST00000537882 TIMELESSQ9UNS1 1208 aa15.81■□□□□ 0.12
NDRG1-229ENST00000537882 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
NDRG1-229ENST00000537882 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
NDRG1-229ENST00000537882 PLEKHG5O94827 1062 aa15.77■□□□□ 0.12
NDRG1-229ENST00000537882 PPP4R2Q9NY27 417 aa15.76■□□□□ 0.11
NDRG1-229ENST00000537882 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
NDRG1-229ENST00000537882 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
NDRG1-229ENST00000537882 SETD5Q9C0A6 1442 aa15.73■□□□□ 0.11
NDRG1-229ENST00000537882 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
NDRG1-229ENST00000537882 IRX6P78412 446 aaPredicted RBP15.71■□□□□ 0.11
NDRG1-229ENST00000537882 SIN3AQ96ST3 1273 aa15.69■□□□□ 0.1
NDRG1-229ENST00000537882 HNRNPUQ00839 825 aaKnown RBP eCLIP15.69■□□□□ 0.1
NDRG1-229ENST00000537882 SALL2Q9Y467 1007 aaPredicted RBP15.67■□□□□ 0.1
NDRG1-229ENST00000537882 NBR1Q14596 966 aa15.66■□□□□ 0.1
NDRG1-229ENST00000537882 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
NDRG1-229ENST00000537882 HIRIP3Q9BW71 556 aaPredicted RBP15.63■□□□□ 0.09
NDRG1-229ENST00000537882 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
NDRG1-229ENST00000537882 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
NDRG1-229ENST00000537882 MAP3K1Q13233 1512 aa15.61■□□□□ 0.09
NDRG1-229ENST00000537882 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
NDRG1-229ENST00000537882 ARHGAP35Q9NRY4 1499 aa15.58■□□□□ 0.08
NDRG1-229ENST00000537882 B4GALNT3Q6L9W6 998 aa15.58■□□□□ 0.08
NDRG1-229ENST00000537882 IPO9Q96P70 1041 aaKnown RBP15.57■□□□□ 0.08
NDRG1-229ENST00000537882 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.087e-17■□□□□ 9
NDRG1-229ENST00000537882 BIVM-ERCC5R4GMW8 1640 aa15.55■□□□□ 0.08
NDRG1-229ENST00000537882 TIAM1Q13009 1591 aa15.55■□□□□ 0.08
NDRG1-229ENST00000537882 UBE2Q2Q8WVN8 375 aa15.54■□□□□ 0.08
NDRG1-229ENST00000537882 ANP32AP39687 249 aaKnown RBP15.54■□□□□ 0.08
NDRG1-229ENST00000537882 IL27Q8NEV9 243 aa15.54■□□□□ 0.08
NDRG1-229ENST00000537882 WASHC2AQ641Q2 1341 aa15.52■□□□□ 0.08
NDRG1-229ENST00000537882 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
NDRG1-229ENST00000537882 TONSLQ96HA7 1378 aa15.51■□□□□ 0.07
NDRG1-229ENST00000537882 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
NDRG1-229ENST00000537882 PHLDB1Q86UU1 1377 aa15.49■□□□□ 0.07
NDRG1-229ENST00000537882 LRRC9Q6ZRR7 1453 aa15.49■□□□□ 0.07
NDRG1-229ENST00000537882 ZBED9Q6R2W3 1325 aa15.49■□□□□ 0.07
NDRG1-229ENST00000537882 CCDC136Q96JN2 1154 aa15.49■□□□□ 0.07
NDRG1-229ENST00000537882 C11orf95C9JLR9 678 aaPredicted RBP15.46■□□□□ 0.07
NDRG1-229ENST00000537882 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
NDRG1-229ENST00000537882 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
NDRG1-229ENST00000537882 USP35Q9P2H5 1018 aa15.45■□□□□ 0.06
NDRG1-229ENST00000537882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■□□□ 13.9
NDRG1-229ENST00000537882 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
NDRG1-229ENST00000537882 NCOA2Q15596 1464 aa15.44■□□□□ 0.06
NDRG1-229ENST00000537882 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
NDRG1-229ENST00000537882 WASHC2CQ9Y4E1 1318 aa15.42■□□□□ 0.06
NDRG1-229ENST00000537882 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
NDRG1-229ENST00000537882 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
NDRG1-229ENST00000537882 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
NDRG1-229ENST00000537882 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
NDRG1-229ENST00000537882 CCDC184Q52MB2 194 aa15.39■□□□□ 0.05
NDRG1-229ENST00000537882 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
NDRG1-229ENST00000537882 RNF123Q5XPI4 1314 aa15.39■□□□□ 0.05
NDRG1-229ENST00000537882 CFAP43Q8NDM7 1665 aa15.38■□□□□ 0.05
NDRG1-229ENST00000537882 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
NDRG1-229ENST00000537882 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
NDRG1-229ENST00000537882 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
NDRG1-229ENST00000537882 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
NDRG1-229ENST00000537882 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
NDRG1-229ENST00000537882 CCDC18Q5T9S5 1454 aa15.34■□□□□ 0.05
NDRG1-229ENST00000537882 HSPA5P11021 654 aaKnown RBP15.34■□□□□ 0.05
NDRG1-229ENST00000537882 MRS2Q9HD23 443 aa15.33■□□□□ 0.05
NDRG1-229ENST00000537882 NEFMP07197 916 aa15.33■□□□□ 0.04
NDRG1-229ENST00000537882 HFM1A2PYH4 1435 aa15.31■□□□□ 0.04
NDRG1-229ENST00000537882 AKNAQ7Z591 1439 aa15.31■□□□□ 0.04
NDRG1-229ENST00000537882 PPM1GO15355 546 aaPredicted RBP15.3■□□□□ 0.04
NDRG1-229ENST00000537882 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
NDRG1-229ENST00000537882 CUX1P39880 1505 aa15.3■□□□□ 0.04
NDRG1-229ENST00000537882 NUDCQ9Y266 331 aa15.3■□□□□ 0.04
NDRG1-229ENST00000537882 EIF4G2P78344 907 aaKnown RBP eCLIP15.29■□□□□ 0.042e-6■■■■■ 29.6
NDRG1-229ENST00000537882 NCOA1Q15788 1441 aa15.28■□□□□ 0.04
NDRG1-229ENST00000537882 PTPN23Q9H3S7 1636 aa15.27■□□□□ 0.03
NDRG1-229ENST00000537882 CCDC7Q96M83 1385 aa15.26■□□□□ 0.03
NDRG1-229ENST00000537882 PCF11O94913 1555 aaKnown RBP15.26■□□□□ 0.03
NDRG1-229ENST00000537882 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
NDRG1-229ENST00000537882 TCERG1O14776 1098 aaKnown RBP15.24■□□□□ 0.03
NDRG1-229ENST00000537882 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
NDRG1-229ENST00000537882 FGD6Q6ZV73 1430 aa15.23■□□□□ 0.03
NDRG1-229ENST00000537882 KLHL34Q8N239 644 aa15.23■□□□□ 0.03
NDRG1-229ENST00000537882 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
NDRG1-229ENST00000537882 GSE1Q14687 1217 aa15.21■□□□□ 0.03
NDRG1-229ENST00000537882 NAIPQ13075 1403 aa15.21■□□□□ 0.03
NDRG1-229ENST00000537882 PODXL2Q9NZ53 605 aa15.21■□□□□ 0.03
NDRG1-229ENST00000537882 ABCA5Q8WWZ7 1642 aa15.21■□□□□ 0.03
NDRG1-229ENST00000537882 IGF1RP08069 1367 aa15.2■□□□□ 0.02
NDRG1-229ENST00000537882 PTPRKQ15262 1439 aa15.2■□□□□ 0.02
NDRG1-229ENST00000537882 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.021e-8■■■■■ 31.9
NDRG1-229ENST00000537882 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
NDRG1-229ENST00000537882 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
NDRG1-229ENST00000537882 MS4A1P11836 297 aa15.19■□□□□ 0.02
NDRG1-229ENST00000537882 PDE4AP27815 886 aa15.19■□□□□ 0.02
NDRG1-229ENST00000537882 FMN1Q68DA7 1419 aa15.19■□□□□ 0.02
NDRG1-229ENST00000537882 BACH2Q9BYV9 841 aa15.19■□□□□ 0.02
NDRG1-229ENST00000537882 RSPH6AQ9H0K4 717 aa15.17■□□□□ 0.02
NDRG1-229ENST00000537882 CASKIN1Q8WXD9 1431 aa15.15■□□□□ 0.02
NDRG1-229ENST00000537882 POLR1AO95602 1720 aaPredicted RBP15.15■□□□□ 0.02
NDRG1-229ENST00000537882 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
NDRG1-229ENST00000537882 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
NDRG1-229ENST00000537882 CARMIL1Q5VZK9 1371 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms