RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 RANGAP1P46060 587 aaPredicted RBP25.3■■□□□ 1.64
SFSWAP-206ENST00000537582 CTTNBP2Q8WZ74 1663 aa25.27■■□□□ 1.64
SFSWAP-206ENST00000537582 NUP160Q12769 1436 aa25.26■■□□□ 1.63
SFSWAP-206ENST00000537582 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
SFSWAP-206ENST00000537582 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
SFSWAP-206ENST00000537582 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
SFSWAP-206ENST00000537582 CLIP1P30622 1438 aa25.15■■□□□ 1.62
SFSWAP-206ENST00000537582 CLASP1Q7Z460 1538 aa25.09■■□□□ 1.61
SFSWAP-206ENST00000537582 ARHGAP35Q9NRY4 1499 aa25.08■■□□□ 1.61
SFSWAP-206ENST00000537582 P3H3Q8IVL6 736 aa25.05■■□□□ 1.6
SFSWAP-206ENST00000537582 UGGT2Q9NYU1 1516 aa25.05■■□□□ 1.6
SFSWAP-206ENST00000537582 OSCARQ8IYS5 282 aa25.04■■□□□ 1.6
SFSWAP-206ENST00000537582 JPH4Q96JJ6 628 aa25.03■■□□□ 1.6
SFSWAP-206ENST00000537582 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
SFSWAP-206ENST00000537582 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
SFSWAP-206ENST00000537582 DISP1Q96F81 1524 aa24.99■■□□□ 1.59
SFSWAP-206ENST00000537582 FHOD3Q2V2M9 1422 aa24.98■■□□□ 1.59
SFSWAP-206ENST00000537582 EFCAB5A4FU69 1503 aa24.98■■□□□ 1.59
SFSWAP-206ENST00000537582 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
SFSWAP-206ENST00000537582 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.58
SFSWAP-206ENST00000537582 KIAA0556O60303 1618 aa24.94■■□□□ 1.58
SFSWAP-206ENST00000537582 ERCC6L2Q5T890 1561 aa24.94■■□□□ 1.58
SFSWAP-206ENST00000537582 TTBK1Q5TCY1 1321 aaPredicted RBP24.87■■□□□ 1.57
SFSWAP-206ENST00000537582 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
SFSWAP-206ENST00000537582 VPS8Q8N3P4 1428 aa24.84■■□□□ 1.57
SFSWAP-206ENST00000537582 PCF11O94913 1555 aaKnown RBP24.76■■□□□ 1.55
SFSWAP-206ENST00000537582 FMN1Q68DA7 1419 aa24.74■■□□□ 1.55
SFSWAP-206ENST00000537582 PTPRGP23470 1445 aa24.71■■□□□ 1.55
SFSWAP-206ENST00000537582 PLB1Q6P1J6 1458 aa24.69■■□□□ 1.54
SFSWAP-206ENST00000537582 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
SFSWAP-206ENST00000537582 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
SFSWAP-206ENST00000537582 CASKIN1Q8WXD9 1431 aa24.67■■□□□ 1.54
SFSWAP-206ENST00000537582 FYCO1Q9BQS8 1478 aa24.65■■□□□ 1.54
SFSWAP-206ENST00000537582 RAPGEF6Q8TEU7 1601 aa24.63■■□□□ 1.53
SFSWAP-206ENST00000537582 ABCA8O94911 1581 aa24.62■■□□□ 1.53
SFSWAP-206ENST00000537582 ARID3CA6NKF2 412 aa24.62■■□□□ 1.53
SFSWAP-206ENST00000537582 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
SFSWAP-206ENST00000537582 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
SFSWAP-206ENST00000537582 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
SFSWAP-206ENST00000537582 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
SFSWAP-206ENST00000537582 LRRIQ1Q96JM4 1722 aa24.59■■□□□ 1.53
SFSWAP-206ENST00000537582 NUP153P49790 1475 aaKnown RBP24.58■■□□□ 1.53
SFSWAP-206ENST00000537582 HECW1Q76N89 1606 aa24.57■■□□□ 1.52
SFSWAP-206ENST00000537582 UACAQ9BZF9 1416 aa24.56■■□□□ 1.52
SFSWAP-206ENST00000537582 CDK13Q14004 1512 aaKnown RBP24.54■■□□□ 1.52
SFSWAP-206ENST00000537582 EPRSP07814 1512 aaKnown RBP24.52■■□□□ 1.52
SFSWAP-206ENST00000537582 TIAM1Q13009 1591 aa24.51■■□□□ 1.51
SFSWAP-206ENST00000537582 ABCC2Q92887 1545 aa24.5■■□□□ 1.51
SFSWAP-206ENST00000537582 APLP2Q06481 763 aa24.5■■□□□ 1.51
SFSWAP-206ENST00000537582 KANK4Q5T7N3 995 aaPredicted RBP24.5■■□□□ 1.51
SFSWAP-206ENST00000537582 CFAP43Q8NDM7 1665 aa24.49■■□□□ 1.51
SFSWAP-206ENST00000537582 ADCY10Q96PN6 1610 aa24.48■■□□□ 1.51
SFSWAP-206ENST00000537582 UHRF1BP1LA0JNW5 1464 aa24.45■■□□□ 1.5
SFSWAP-206ENST00000537582 ATP10BO94823 1461 aa24.45■■□□□ 1.5
SFSWAP-206ENST00000537582 CCDC18Q5T9S5 1454 aa24.45■■□□□ 1.5
SFSWAP-206ENST00000537582 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.5
SFSWAP-206ENST00000537582 MAP3K1Q13233 1512 aa24.44■■□□□ 1.5
SFSWAP-206ENST00000537582 MAGI3Q5TCQ9 1506 aa24.43■■□□□ 1.5
SFSWAP-206ENST00000537582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.42■■□□□ 1.5
SFSWAP-206ENST00000537582 HNRNPUL2Q1KMD3 747 aaKnown RBP24.42■■□□□ 1.5
SFSWAP-206ENST00000537582 LRRC9Q6ZRR7 1453 aa24.4■■□□□ 1.5
SFSWAP-206ENST00000537582 KDM5BQ9UGL1 1544 aa24.37■■□□□ 1.49
SFSWAP-206ENST00000537582 ZCCHC11Q5TAX3 1644 aaKnown RBP24.36■■□□□ 1.49
SFSWAP-206ENST00000537582 DNAJC5Q9H3Z4 198 aa24.33■■□□□ 1.49
SFSWAP-206ENST00000537582 MTUS2Q5JR59 1369 aa24.33■■□□□ 1.49
SFSWAP-206ENST00000537582 EHBP1L1Q8N3D4 1523 aa24.29■■□□□ 1.48
SFSWAP-206ENST00000537582 TROQ12816 1431 aaPredicted RBP24.26■■□□□ 1.47
SFSWAP-206ENST00000537582 PLEKHD1A6NEE1 506 aa24.25■■□□□ 1.47
SFSWAP-206ENST00000537582 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
SFSWAP-206ENST00000537582 KIF14Q15058 1648 aa24.23■■□□□ 1.47
SFSWAP-206ENST00000537582 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.47
SFSWAP-206ENST00000537582 NCOA2Q15596 1464 aa24.2■■□□□ 1.47
SFSWAP-206ENST00000537582 ASXL2Q76L83 1435 aa24.19■■□□□ 1.46
SFSWAP-206ENST00000537582 PHLDB1Q86UU1 1377 aa24.19■■□□□ 1.46
SFSWAP-206ENST00000537582 SUPT6HQ7KZ85 1726 aaKnown RBP24.19■■□□□ 1.46
SFSWAP-206ENST00000537582 WDR7Q9Y4E6 1490 aa24.16■■□□□ 1.46
SFSWAP-206ENST00000537582 KCNH8Q96L42 1107 aa24.16■■□□□ 1.46
SFSWAP-206ENST00000537582 ABCC10Q5T3U5 1492 aa24.1■■□□□ 1.45
SFSWAP-206ENST00000537582 MAPKBP1O60336 1514 aa24.09■■□□□ 1.45
SFSWAP-206ENST00000537582 TTC37Q6PGP7 1564 aa24.08■■□□□ 1.45
SFSWAP-206ENST00000537582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.08■■□□□ 1.456e-8■■■■□ 20.3
SFSWAP-206ENST00000537582 MYOM3Q5VTT5 1437 aa24.05■■□□□ 1.44
SFSWAP-206ENST00000537582 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
SFSWAP-206ENST00000537582 GPATCH8Q9UKJ3 1502 aaKnown RBP24.03■■□□□ 1.44
SFSWAP-206ENST00000537582 TRIM26Q12899 539 aaPredicted RBP24.02■■□□□ 1.44
SFSWAP-206ENST00000537582 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
SFSWAP-206ENST00000537582 RRBP1Q9P2E9 1410 aaKnown RBP24■■□□□ 1.43
SFSWAP-206ENST00000537582 CDC42BPAQ5VT25 1732 aa23.99■■□□□ 1.43
SFSWAP-206ENST00000537582 ABCA9Q8IUA7 1624 aa23.96■■□□□ 1.43
SFSWAP-206ENST00000537582 ITSN2Q9NZM3 1697 aa23.95■■□□□ 1.42
SFSWAP-206ENST00000537582 PREX2Q70Z35 1606 aa23.94■■□□□ 1.42
SFSWAP-206ENST00000537582 ZNF644Q9H582 1327 aaPredicted RBP23.94■■□□□ 1.42
SFSWAP-206ENST00000537582 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
SFSWAP-206ENST00000537582 FAM50AQ14320 339 aaKnown RBP23.93■■□□□ 1.42
SFSWAP-206ENST00000537582 CFDP1Q9UEE9 299 aaPredicted RBP23.93■■□□□ 1.42
SFSWAP-206ENST00000537582 PTPN23Q9H3S7 1636 aa23.93■■□□□ 1.42
SFSWAP-206ENST00000537582 DIP2BQ9P265 1576 aa23.93■■□□□ 1.42
SFSWAP-206ENST00000537582 MYO5CQ9NQX4 1742 aa23.92■■□□□ 1.42
SFSWAP-206ENST00000537582 CDC42BPBQ9Y5S2 1711 aa23.92■■□□□ 1.42
SFSWAP-206ENST00000537582 MIA2Q96PC5 1412 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms