RNA–Protein interactions for RNA: ENST00000537400.1

PRKAB1-203, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-203ENST00000537400 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
PRKAB1-203ENST00000537400 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
PRKAB1-203ENST00000537400 KIAA0586Q9BVV6 1533 aa23.04■■□□□ 1.28
PRKAB1-203ENST00000537400 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
PRKAB1-203ENST00000537400 ARHGEF11O15085 1522 aa22.99■■□□□ 1.27
PRKAB1-203ENST00000537400 CTTNBP2Q8WZ74 1663 aa22.95■■□□□ 1.26
PRKAB1-203ENST00000537400 IQGAP2Q13576 1575 aa22.94■■□□□ 1.26
PRKAB1-203ENST00000537400 UBTFP17480 764 aaKnown RBP22.94■■□□□ 1.26
PRKAB1-203ENST00000537400 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
PRKAB1-203ENST00000537400 SHROOM2Q13796 1616 aa22.9■■□□□ 1.26
PRKAB1-203ENST00000537400 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
PRKAB1-203ENST00000537400 EHMT2Q96KQ7 1210 aa22.86■■□□□ 1.25
PRKAB1-203ENST00000537400 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
PRKAB1-203ENST00000537400 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
PRKAB1-203ENST00000537400 PRG4Q92954 1404 aaPredicted RBP22.8■■□□□ 1.24
PRKAB1-203ENST00000537400 CARMIL2Q6F5E8 1435 aa22.79■■□□□ 1.24
PRKAB1-203ENST00000537400 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
PRKAB1-203ENST00000537400 DISP1Q96F81 1524 aa22.75■■□□□ 1.23
PRKAB1-203ENST00000537400 EFCAB5A4FU69 1503 aa22.74■■□□□ 1.23
PRKAB1-203ENST00000537400 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
PRKAB1-203ENST00000537400 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
PRKAB1-203ENST00000537400 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
PRKAB1-203ENST00000537400 CLIP1P30622 1438 aa22.66■■□□□ 1.22
PRKAB1-203ENST00000537400 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
PRKAB1-203ENST00000537400 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
PRKAB1-203ENST00000537400 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
PRKAB1-203ENST00000537400 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.21
PRKAB1-203ENST00000537400 PTPRGP23470 1445 aa22.61■■□□□ 1.21
PRKAB1-203ENST00000537400 FHOD3Q2V2M9 1422 aa22.57■■□□□ 1.2
PRKAB1-203ENST00000537400 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
PRKAB1-203ENST00000537400 FMN1Q68DA7 1419 aa22.53■■□□□ 1.2
PRKAB1-203ENST00000537400 UACAQ9BZF9 1416 aa22.48■■□□□ 1.19
PRKAB1-203ENST00000537400 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
PRKAB1-203ENST00000537400 ABCA8O94911 1581 aa22.45■■□□□ 1.18
PRKAB1-203ENST00000537400 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
PRKAB1-203ENST00000537400 ABCC2Q92887 1545 aa22.42■■□□□ 1.18
PRKAB1-203ENST00000537400 PLB1Q6P1J6 1458 aa22.42■■□□□ 1.18
PRKAB1-203ENST00000537400 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
PRKAB1-203ENST00000537400 RAPGEF6Q8TEU7 1601 aa22.39■■□□□ 1.18
PRKAB1-203ENST00000537400 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.17
PRKAB1-203ENST00000537400 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
PRKAB1-203ENST00000537400 ADCY10Q96PN6 1610 aa22.37■■□□□ 1.17
PRKAB1-203ENST00000537400 FYCO1Q9BQS8 1478 aa22.35■■□□□ 1.17
PRKAB1-203ENST00000537400 HECW1Q76N89 1606 aa22.34■■□□□ 1.17
PRKAB1-203ENST00000537400 KDM5BQ9UGL1 1544 aa22.33■■□□□ 1.17
PRKAB1-203ENST00000537400 NUP153P49790 1475 aaKnown RBP22.32■■□□□ 1.16
PRKAB1-203ENST00000537400 PCF11O94913 1555 aaKnown RBP22.31■■□□□ 1.16
PRKAB1-203ENST00000537400 NPM1P06748 294 aaKnown RBP eCLIP22.31■■□□□ 1.16
PRKAB1-203ENST00000537400 ATP10BO94823 1461 aa22.26■■□□□ 1.15
PRKAB1-203ENST00000537400 CCDC18Q5T9S5 1454 aa22.26■■□□□ 1.15
PRKAB1-203ENST00000537400 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
PRKAB1-203ENST00000537400 ATP1B4Q9UN42 357 aaPredicted RBP22.24■■□□□ 1.15
PRKAB1-203ENST00000537400 ZCCHC11Q5TAX3 1644 aaKnown RBP22.23■■□□□ 1.15
PRKAB1-203ENST00000537400 MAPKBP1O60336 1514 aa22.21■■□□□ 1.15
PRKAB1-203ENST00000537400 CDK11AQ9UQ88 783 aaPredicted RBP22.19■■□□□ 1.14
PRKAB1-203ENST00000537400 MAP3K1Q13233 1512 aa22.18■■□□□ 1.14
PRKAB1-203ENST00000537400 CDK13Q14004 1512 aaKnown RBP22.17■■□□□ 1.14
PRKAB1-203ENST00000537400 ARID3CA6NKF2 412 aa22.16■■□□□ 1.14
PRKAB1-203ENST00000537400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
PRKAB1-203ENST00000537400 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
PRKAB1-203ENST00000537400 LRRIQ1Q96JM4 1722 aa22.15■■□□□ 1.14
PRKAB1-203ENST00000537400 ASXL2Q76L83 1435 aa22.14■■□□□ 1.14
PRKAB1-203ENST00000537400 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.13
PRKAB1-203ENST00000537400 APLP2Q06481 763 aa22.13■■□□□ 1.13
PRKAB1-203ENST00000537400 WDR7Q9Y4E6 1490 aa22.12■■□□□ 1.13
PRKAB1-203ENST00000537400 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
PRKAB1-203ENST00000537400 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
PRKAB1-203ENST00000537400 TROQ12816 1431 aaPredicted RBP22.07■■□□□ 1.12
PRKAB1-203ENST00000537400 MTUS2Q5JR59 1369 aa22.04■■□□□ 1.12
PRKAB1-203ENST00000537400 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
PRKAB1-203ENST00000537400 LRRC9Q6ZRR7 1453 aa22.03■■□□□ 1.12
PRKAB1-203ENST00000537400 EHBP1L1Q8N3D4 1523 aa22.02■■□□□ 1.12
PRKAB1-203ENST00000537400 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
PRKAB1-203ENST00000537400 KIF13AQ9H1H9 1805 aa22.01■■□□□ 1.11
PRKAB1-203ENST00000537400 GLI2P10070 1586 aa21.99■■□□□ 1.11
PRKAB1-203ENST00000537400 KCNH8Q96L42 1107 aa21.98■■□□□ 1.11
PRKAB1-203ENST00000537400 DIP2BQ9P265 1576 aa21.98■■□□□ 1.11
PRKAB1-203ENST00000537400 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
PRKAB1-203ENST00000537400 KIF14Q15058 1648 aa21.97■■□□□ 1.11
PRKAB1-203ENST00000537400 KANK4Q5T7N3 995 aaPredicted RBP21.95■■□□□ 1.1
PRKAB1-203ENST00000537400 FAM69CQ0P6D2 419 aa21.94■■□□□ 1.1
PRKAB1-203ENST00000537400 ABCA9Q8IUA7 1624 aa21.93■■□□□ 1.1
PRKAB1-203ENST00000537400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.91■■□□□ 1.1
PRKAB1-203ENST00000537400 SUPT6HQ7KZ85 1726 aaKnown RBP21.91■■□□□ 1.1
PRKAB1-203ENST00000537400 NCOA2Q15596 1464 aa21.87■■□□□ 1.09
PRKAB1-203ENST00000537400 CD109Q6YHK3 1445 aa21.87■■□□□ 1.09
PRKAB1-203ENST00000537400 MAP3K4Q9Y6R4 1608 aa21.87■■□□□ 1.09
PRKAB1-203ENST00000537400 TTC37Q6PGP7 1564 aa21.86■■□□□ 1.09
PRKAB1-203ENST00000537400 ARAP3Q8WWN8 1544 aa21.85■■□□□ 1.09
PRKAB1-203ENST00000537400 CCNB3Q8WWL7 1395 aa21.84■■□□□ 1.09
PRKAB1-203ENST00000537400 PLCH2O75038 1416 aa21.83■■□□□ 1.09
PRKAB1-203ENST00000537400 GPATCH8Q9UKJ3 1502 aaKnown RBP21.8■■□□□ 1.08
PRKAB1-203ENST00000537400 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
PRKAB1-203ENST00000537400 TEX14Q8IWB6 1497 aa21.79■■□□□ 1.08
PRKAB1-203ENST00000537400 PREX2Q70Z35 1606 aa21.77■■□□□ 1.08
PRKAB1-203ENST00000537400 ITSN2Q9NZM3 1697 aa21.77■■□□□ 1.08
PRKAB1-203ENST00000537400 MYOM3Q5VTT5 1437 aa21.77■■□□□ 1.08
PRKAB1-203ENST00000537400 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
PRKAB1-203ENST00000537400 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
PRKAB1-203ENST00000537400 MIA2Q96PC5 1412 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms