RNA–Protein interactions for RNA: ENST00000537400.1

PRKAB1-203, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-203ENST00000537400 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
PRKAB1-203ENST00000537400 CCDC180Q9P1Z9 1646 aa29.52■■■□□ 2.32
PRKAB1-203ENST00000537400 ABCC9O60706 1549 aa28.37■■■□□ 2.13
PRKAB1-203ENST00000537400 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
PRKAB1-203ENST00000537400 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
PRKAB1-203ENST00000537400 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
PRKAB1-203ENST00000537400 NACADO15069 1562 aa27.67■■■□□ 2.02
PRKAB1-203ENST00000537400 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
PRKAB1-203ENST00000537400 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
PRKAB1-203ENST00000537400 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
PRKAB1-203ENST00000537400 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
PRKAB1-203ENST00000537400 DNAJC5BQ9UF47 199 aa26.7■■□□□ 1.86
PRKAB1-203ENST00000537400 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
PRKAB1-203ENST00000537400 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
PRKAB1-203ENST00000537400 PABPN1Q86U42 306 aaKnown RBP eCLIP26.57■■□□□ 1.84
PRKAB1-203ENST00000537400 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
PRKAB1-203ENST00000537400 CECR2Q9BXF3 1484 aa25.91■■□□□ 1.74
PRKAB1-203ENST00000537400 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
PRKAB1-203ENST00000537400 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
PRKAB1-203ENST00000537400 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
PRKAB1-203ENST00000537400 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.71
PRKAB1-203ENST00000537400 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
PRKAB1-203ENST00000537400 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
PRKAB1-203ENST00000537400 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
PRKAB1-203ENST00000537400 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
PRKAB1-203ENST00000537400 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
PRKAB1-203ENST00000537400 HMGXB3Q12766 1538 aa25.44■■□□□ 1.66
PRKAB1-203ENST00000537400 WIZO95785 1651 aa25.42■■□□□ 1.66
PRKAB1-203ENST00000537400 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
PRKAB1-203ENST00000537400 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
PRKAB1-203ENST00000537400 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
PRKAB1-203ENST00000537400 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
PRKAB1-203ENST00000537400 CADPSQ9ULU8 1353 aa24.79■■□□□ 1.56
PRKAB1-203ENST00000537400 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
PRKAB1-203ENST00000537400 CFTRP13569 1480 aa24.75■■□□□ 1.55
PRKAB1-203ENST00000537400 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
PRKAB1-203ENST00000537400 NESP48681 1621 aa24.67■■□□□ 1.54
PRKAB1-203ENST00000537400 PDS5BQ9NTI5 1447 aa24.6■■□□□ 1.53
PRKAB1-203ENST00000537400 CUX2O14529 1486 aa24.55■■□□□ 1.52
PRKAB1-203ENST00000537400 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
PRKAB1-203ENST00000537400 FANCD2Q9BXW9 1451 aa24.48■■□□□ 1.51
PRKAB1-203ENST00000537400 ERCC6Q03468 1493 aa24.45■■□□□ 1.51
PRKAB1-203ENST00000537400 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
PRKAB1-203ENST00000537400 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
PRKAB1-203ENST00000537400 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
PRKAB1-203ENST00000537400 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
PRKAB1-203ENST00000537400 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
PRKAB1-203ENST00000537400 WDR62O43379 1518 aa24.2■■□□□ 1.46
PRKAB1-203ENST00000537400 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
PRKAB1-203ENST00000537400 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
PRKAB1-203ENST00000537400 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
PRKAB1-203ENST00000537400 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
PRKAB1-203ENST00000537400 CUX1P39880 1505 aa24.1■■□□□ 1.45
PRKAB1-203ENST00000537400 TOP2BQ02880 1626 aa24.04■■□□□ 1.44
PRKAB1-203ENST00000537400 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
PRKAB1-203ENST00000537400 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
PRKAB1-203ENST00000537400 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
PRKAB1-203ENST00000537400 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
PRKAB1-203ENST00000537400 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
PRKAB1-203ENST00000537400 SOGA1O94964 1423 aa23.88■■□□□ 1.41
PRKAB1-203ENST00000537400 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
PRKAB1-203ENST00000537400 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
PRKAB1-203ENST00000537400 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.41
PRKAB1-203ENST00000537400 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
PRKAB1-203ENST00000537400 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
PRKAB1-203ENST00000537400 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
PRKAB1-203ENST00000537400 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
PRKAB1-203ENST00000537400 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
PRKAB1-203ENST00000537400 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
PRKAB1-203ENST00000537400 KIF27Q86VH2 1401 aa23.63■■□□□ 1.37
PRKAB1-203ENST00000537400 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
PRKAB1-203ENST00000537400 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.371e-7■■■■■ 42.9
PRKAB1-203ENST00000537400 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
PRKAB1-203ENST00000537400 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
PRKAB1-203ENST00000537400 EEA1Q15075 1411 aa23.52■■□□□ 1.36
PRKAB1-203ENST00000537400 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
PRKAB1-203ENST00000537400 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
PRKAB1-203ENST00000537400 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
PRKAB1-203ENST00000537400 IGF1RP08069 1367 aa23.46■■□□□ 1.35
PRKAB1-203ENST00000537400 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
PRKAB1-203ENST00000537400 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
PRKAB1-203ENST00000537400 FHAD1B1AJZ9 1412 aa23.39■■□□□ 1.33
PRKAB1-203ENST00000537400 CUL7Q14999 1698 aa23.38■■□□□ 1.33
PRKAB1-203ENST00000537400 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
PRKAB1-203ENST00000537400 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
PRKAB1-203ENST00000537400 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
PRKAB1-203ENST00000537400 CARMIL1Q5VZK9 1371 aa23.33■■□□□ 1.33
PRKAB1-203ENST00000537400 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
PRKAB1-203ENST00000537400 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
PRKAB1-203ENST00000537400 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
PRKAB1-203ENST00000537400 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
PRKAB1-203ENST00000537400 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
PRKAB1-203ENST00000537400 FBLN2P98095 1184 aa23.23■■□□□ 1.31
PRKAB1-203ENST00000537400 OSCARQ8IYS5 282 aa23.22■■□□□ 1.31
PRKAB1-203ENST00000537400 CHD1O14646 1710 aa23.21■■□□□ 1.31
PRKAB1-203ENST00000537400 KIF21BO75037 1637 aa23.18■■□□□ 1.3
PRKAB1-203ENST00000537400 NUP160Q12769 1436 aa23.15■■□□□ 1.3
PRKAB1-203ENST00000537400 RIMBP3CA6NJZ7 1639 aa23.09■■□□□ 1.29
PRKAB1-203ENST00000537400 RIMBP3BA6NNM3 1639 aa23.09■■□□□ 1.29
PRKAB1-203ENST00000537400 RIMBP3Q9UFD9 1639 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms