RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 GRIN2AQ12879 1464 aa11.04□□□□□ -0.64
IFT88-207ENST00000537103 CLASP1Q7Z460 1538 aa11.04□□□□□ -0.64
IFT88-207ENST00000537103 PRXQ9BXM0 1461 aa11.03□□□□□ -0.64
IFT88-207ENST00000537103 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
IFT88-207ENST00000537103 SHROOM2Q13796 1616 aa11□□□□□ -0.65
IFT88-207ENST00000537103 CARMIL1Q5VZK9 1371 aa10.98□□□□□ -0.65
IFT88-207ENST00000537103 RUSC2Q8N2Y8 1516 aa10.97□□□□□ -0.65
IFT88-207ENST00000537103 KIAA0586Q9BVV6 1533 aa10.96□□□□□ -0.65
IFT88-207ENST00000537103 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
IFT88-207ENST00000537103 CTTNBP2Q8WZ74 1663 aa10.95□□□□□ -0.66
IFT88-207ENST00000537103 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
IFT88-207ENST00000537103 NCBP3Q53F19 620 aaKnown RBP10.93□□□□□ -0.66
IFT88-207ENST00000537103 CHMP7Q8WUX9 453 aaPredicted RBP10.92□□□□□ -0.66
IFT88-207ENST00000537103 UGGT2Q9NYU1 1516 aa10.92□□□□□ -0.66
IFT88-207ENST00000537103 IQGAP2Q13576 1575 aa10.91□□□□□ -0.66
IFT88-207ENST00000537103 GOLGA3Q08378 1498 aa10.9□□□□□ -0.66
IFT88-207ENST00000537103 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
IFT88-207ENST00000537103 DNAJC5Q9H3Z4 198 aa10.84□□□□□ -0.67
IFT88-207ENST00000537103 SAMD9Q5K651 1589 aa10.84□□□□□ -0.67
IFT88-207ENST00000537103 CARMIL2Q6F5E8 1435 aa10.82□□□□□ -0.68
IFT88-207ENST00000537103 ARHGEF11O15085 1522 aa10.82□□□□□ -0.68
IFT88-207ENST00000537103 RIMBP3CA6NJZ7 1639 aa10.81□□□□□ -0.68
IFT88-207ENST00000537103 RIMBP3BA6NNM3 1639 aa10.81□□□□□ -0.68
IFT88-207ENST00000537103 RIMBP3Q9UFD9 1639 aa10.81□□□□□ -0.68
IFT88-207ENST00000537103 KIAA0556O60303 1618 aa10.81□□□□□ -0.68
IFT88-207ENST00000537103 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
IFT88-207ENST00000537103 TNIKQ9UKE5 1360 aa10.79□□□□□ -0.68
IFT88-207ENST00000537103 ZBTB22O15209 634 aa10.78□□□□□ -0.68
IFT88-207ENST00000537103 UHRF1BP1LA0JNW5 1464 aa10.78□□□□□ -0.68
IFT88-207ENST00000537103 DISP1Q96F81 1524 aa10.78□□□□□ -0.68
IFT88-207ENST00000537103 PRG4Q92954 1404 aaPredicted RBP10.76□□□□□ -0.69
IFT88-207ENST00000537103 FBLN2P98095 1184 aa10.76□□□□□ -0.69
IFT88-207ENST00000537103 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
IFT88-207ENST00000537103 ARAP1Q96P48 1450 aa10.73□□□□□ -0.69
IFT88-207ENST00000537103 ABCA8O94911 1581 aa10.71□□□□□ -0.7
IFT88-207ENST00000537103 ABCC2Q92887 1545 aa10.69□□□□□ -0.7
IFT88-207ENST00000537103 FAM9AQ8IZU1 332 aaPredicted RBP10.69□□□□□ -0.7
IFT88-207ENST00000537103 ERCC6L2Q5T890 1561 aa10.68□□□□□ -0.7
IFT88-207ENST00000537103 FMN1Q68DA7 1419 aa10.68□□□□□ -0.7
IFT88-207ENST00000537103 MAPKBP1O60336 1514 aa10.67□□□□□ -0.7
IFT88-207ENST00000537103 PTPRGP23470 1445 aa10.67□□□□□ -0.7
IFT88-207ENST00000537103 ARHGAP35Q9NRY4 1499 aa10.66□□□□□ -0.7
IFT88-207ENST00000537103 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
IFT88-207ENST00000537103 KDM5BQ9UGL1 1544 aa10.65□□□□□ -0.7
IFT88-207ENST00000537103 RAPGEF6Q8TEU7 1601 aa10.65□□□□□ -0.7
IFT88-207ENST00000537103 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
IFT88-207ENST00000537103 HECW1Q76N89 1606 aa10.64□□□□□ -0.71
IFT88-207ENST00000537103 ADCY10Q96PN6 1610 aa10.64□□□□□ -0.71
IFT88-207ENST00000537103 DAXXQ9UER7 740 aaPredicted RBP10.63□□□□□ -0.71
IFT88-207ENST00000537103 FYCO1Q9BQS8 1478 aa10.62□□□□□ -0.71
IFT88-207ENST00000537103 CLIP1P30622 1438 aa10.62□□□□□ -0.71
IFT88-207ENST00000537103 MAP3K1Q13233 1512 aa10.62□□□□□ -0.71
IFT88-207ENST00000537103 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
IFT88-207ENST00000537103 CASKIN1Q8WXD9 1431 aa10.61□□□□□ -0.71
IFT88-207ENST00000537103 GLI2P10070 1586 aa10.6□□□□□ -0.71
IFT88-207ENST00000537103 CEP162Q5TB80 1403 aa10.6□□□□□ -0.71
IFT88-207ENST00000537103 UBTFP17480 764 aaKnown RBP10.6□□□□□ -0.71
IFT88-207ENST00000537103 PLB1Q6P1J6 1458 aa10.58□□□□□ -0.72
IFT88-207ENST00000537103 ZCCHC11Q5TAX3 1644 aaKnown RBP10.57□□□□□ -0.72
IFT88-207ENST00000537103 FHOD3Q2V2M9 1422 aa10.55□□□□□ -0.72
IFT88-207ENST00000537103 PIAS4Q8N2W9 510 aaPredicted RBP10.55□□□□□ -0.72
IFT88-207ENST00000537103 NUP153P49790 1475 aaKnown RBP10.55□□□□□ -0.72
IFT88-207ENST00000537103 VPS8Q8N3P4 1428 aa10.54□□□□□ -0.72
IFT88-207ENST00000537103 CFAP43Q8NDM7 1665 aa10.54□□□□□ -0.72
IFT88-207ENST00000537103 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
IFT88-207ENST00000537103 ARAP3Q8WWN8 1544 aa10.52□□□□□ -0.73
IFT88-207ENST00000537103 ATP10BO94823 1461 aa10.52□□□□□ -0.73
IFT88-207ENST00000537103 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
IFT88-207ENST00000537103 ABCC10Q5T3U5 1492 aa10.51□□□□□ -0.73
IFT88-207ENST00000537103 WDR7Q9Y4E6 1490 aa10.51□□□□□ -0.73
IFT88-207ENST00000537103 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
IFT88-207ENST00000537103 DIP2BQ9P265 1576 aa10.5□□□□□ -0.73
IFT88-207ENST00000537103 ABCA9Q8IUA7 1624 aa10.49□□□□□ -0.73
IFT88-207ENST00000537103 CYB5RLQ6IPT4 315 aa10.48□□□□□ -0.73
IFT88-207ENST00000537103 TAOK2Q9UL54 1235 aa10.48□□□□□ -0.73
IFT88-207ENST00000537103 MAP3K4Q9Y6R4 1608 aa10.48□□□□□ -0.73
IFT88-207ENST00000537103 EHBP1L1Q8N3D4 1523 aa10.48□□□□□ -0.73
IFT88-207ENST00000537103 PHLDB1Q86UU1 1377 aa10.48□□□□□ -0.73
IFT88-207ENST00000537103 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
IFT88-207ENST00000537103 CFAP74Q9C0B2 1584 aa10.47□□□□□ -0.73
IFT88-207ENST00000537103 ASXL2Q76L83 1435 aa10.47□□□□□ -0.73
IFT88-207ENST00000537103 LRRIQ1Q96JM4 1722 aa10.47□□□□□ -0.73
IFT88-207ENST00000537103 TIAM1Q13009 1591 aa10.46□□□□□ -0.73
IFT88-207ENST00000537103 CDK11AQ9UQ88 783 aaPredicted RBP10.46□□□□□ -0.74
IFT88-207ENST00000537103 MAGI3Q5TCQ9 1506 aa10.46□□□□□ -0.74
IFT88-207ENST00000537103 TROQ12816 1431 aaPredicted RBP10.46□□□□□ -0.74
IFT88-207ENST00000537103 KIF14Q15058 1648 aa10.45□□□□□ -0.74
IFT88-207ENST00000537103 KIF13AQ9H1H9 1805 aa10.45□□□□□ -0.74
IFT88-207ENST00000537103 TEX14Q8IWB6 1497 aa10.43□□□□□ -0.74
IFT88-207ENST00000537103 NEO1Q92859 1461 aa10.4□□□□□ -0.74
IFT88-207ENST00000537103 ITSN2Q9NZM3 1697 aa10.4□□□□□ -0.74
IFT88-207ENST00000537103 BCANQ96GW7 911 aa10.4□□□□□ -0.74
IFT88-207ENST00000537103 SUPT6HQ7KZ85 1726 aaKnown RBP10.4□□□□□ -0.74
IFT88-207ENST00000537103 CDK13Q14004 1512 aaKnown RBP10.39□□□□□ -0.75
IFT88-207ENST00000537103 LOC105371045A0A1W2PR82 267 aa10.39□□□□□ -0.75
IFT88-207ENST00000537103 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
IFT88-207ENST00000537103 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
IFT88-207ENST00000537103 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
IFT88-207ENST00000537103 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
IFT88-207ENST00000537103 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms