RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SHROOM2Q13796 1616 aa24.34■■□□□ 1.49
UBE3B-206ENST00000536398 PRG4Q92954 1404 aaPredicted RBP24.3■■□□□ 1.48
UBE3B-206ENST00000536398 KIAA0586Q9BVV6 1533 aa24.25■■□□□ 1.47
UBE3B-206ENST00000536398 TRHP20396 242 aaPredicted RBP24.2■■□□□ 1.46
UBE3B-206ENST00000536398 RAPGEF2Q9Y4G8 1499 aa24.18■■□□□ 1.46
UBE3B-206ENST00000536398 PRXQ9BXM0 1461 aa24.06■■□□□ 1.44
UBE3B-206ENST00000536398 IQGAP2Q13576 1575 aa24.05■■□□□ 1.44
UBE3B-206ENST00000536398 TTBK1Q5TCY1 1321 aaPredicted RBP24.05■■□□□ 1.44
UBE3B-206ENST00000536398 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
UBE3B-206ENST00000536398 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
UBE3B-206ENST00000536398 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
UBE3B-206ENST00000536398 PTPRGP23470 1445 aa23.98■■□□□ 1.43
UBE3B-206ENST00000536398 CARMIL2Q6F5E8 1435 aa23.98■■□□□ 1.43
UBE3B-206ENST00000536398 DISP1Q96F81 1524 aa23.97■■□□□ 1.43
UBE3B-206ENST00000536398 TNIKQ9UKE5 1360 aa23.96■■□□□ 1.43
UBE3B-206ENST00000536398 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
UBE3B-206ENST00000536398 ADCY10Q96PN6 1610 aa23.93■■□□□ 1.42
UBE3B-206ENST00000536398 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
UBE3B-206ENST00000536398 EEA1Q15075 1411 aa23.89■■□□□ 1.41
UBE3B-206ENST00000536398 CTTNBP2Q8WZ74 1663 aa23.87■■□□□ 1.41
UBE3B-206ENST00000536398 KIAA0556O60303 1618 aa23.84■■□□□ 1.41
UBE3B-206ENST00000536398 UACAQ9BZF9 1416 aa23.8■■□□□ 1.4
UBE3B-206ENST00000536398 MAPKBP1O60336 1514 aa23.78■■□□□ 1.4
UBE3B-206ENST00000536398 FAM69CQ0P6D2 419 aa23.77■■□□□ 1.4
UBE3B-206ENST00000536398 P3H3Q8IVL6 736 aa23.76■■□□□ 1.39
UBE3B-206ENST00000536398 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
UBE3B-206ENST00000536398 ABCC2Q92887 1545 aa23.75■■□□□ 1.39
UBE3B-206ENST00000536398 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
UBE3B-206ENST00000536398 UHRF1BP1LA0JNW5 1464 aa23.75■■□□□ 1.39
UBE3B-206ENST00000536398 ABCC10Q5T3U5 1492 aa23.75■■□□□ 1.39
UBE3B-206ENST00000536398 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
UBE3B-206ENST00000536398 KIF13AQ9H1H9 1805 aa23.73■■□□□ 1.39
UBE3B-206ENST00000536398 PLB1Q6P1J6 1458 aa23.7■■□□□ 1.38
UBE3B-206ENST00000536398 KIF21BO75037 1637 aa23.67■■□□□ 1.38
UBE3B-206ENST00000536398 DIP2BQ9P265 1576 aa23.67■■□□□ 1.38
UBE3B-206ENST00000536398 ASXL2Q76L83 1435 aa23.66■■□□□ 1.38
UBE3B-206ENST00000536398 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
UBE3B-206ENST00000536398 ABCA8O94911 1581 aa23.62■■□□□ 1.37
UBE3B-206ENST00000536398 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
UBE3B-206ENST00000536398 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
UBE3B-206ENST00000536398 ZCCHC11Q5TAX3 1644 aaKnown RBP23.59■■□□□ 1.37
UBE3B-206ENST00000536398 ARID3CA6NKF2 412 aa23.58■■□□□ 1.37
UBE3B-206ENST00000536398 FHOD3Q2V2M9 1422 aa23.55■■□□□ 1.36
UBE3B-206ENST00000536398 EPRSP07814 1512 aaKnown RBP23.51■■□□□ 1.35
UBE3B-206ENST00000536398 TSPOAP1O95153 1857 aa23.5■■□□□ 1.35
UBE3B-206ENST00000536398 GLI2P10070 1586 aa23.48■■□□□ 1.35
UBE3B-206ENST00000536398 KCNH8Q96L42 1107 aa23.47■■□□□ 1.35
UBE3B-206ENST00000536398 ATP10BO94823 1461 aa23.47■■□□□ 1.35
UBE3B-206ENST00000536398 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
UBE3B-206ENST00000536398 RAPGEF6Q8TEU7 1601 aa23.43■■□□□ 1.34
UBE3B-206ENST00000536398 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
UBE3B-206ENST00000536398 PPRC1Q5VV67 1664 aaKnown RBP23.4■■□□□ 1.34
UBE3B-206ENST00000536398 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.34
UBE3B-206ENST00000536398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.38■■□□□ 1.33
UBE3B-206ENST00000536398 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
UBE3B-206ENST00000536398 ARHGAP35Q9NRY4 1499 aa23.37■■□□□ 1.33
UBE3B-206ENST00000536398 MAP3K4Q9Y6R4 1608 aa23.37■■□□□ 1.33
UBE3B-206ENST00000536398 KDM6BO15054 1643 aa23.33■■□□□ 1.33
UBE3B-206ENST00000536398 CD109Q6YHK3 1445 aa23.32■■□□□ 1.32
UBE3B-206ENST00000536398 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
UBE3B-206ENST00000536398 ATP1B4Q9UN42 357 aaPredicted RBP23.28■■□□□ 1.32
UBE3B-206ENST00000536398 TEX14Q8IWB6 1497 aa23.26■■□□□ 1.31
UBE3B-206ENST00000536398 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
UBE3B-206ENST00000536398 PLEKHD1A6NEE1 506 aa23.24■■□□□ 1.31
UBE3B-206ENST00000536398 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
UBE3B-206ENST00000536398 CFAP43Q8NDM7 1665 aa23.23■■□□□ 1.31
UBE3B-206ENST00000536398 CDK13Q14004 1512 aaKnown RBP23.23■■□□□ 1.31
UBE3B-206ENST00000536398 ABCA9Q8IUA7 1624 aa23.18■■□□□ 1.3
UBE3B-206ENST00000536398 CLIP1P30622 1438 aa23.15■■□□□ 1.3
UBE3B-206ENST00000536398 HECW1Q76N89 1606 aa23.13■■□□□ 1.29
UBE3B-206ENST00000536398 LOC105371045A0A1W2PR82 267 aa23.12■■□□□ 1.29
UBE3B-206ENST00000536398 AEBP2Q6ZN18 517 aaPredicted RBP23.1■■□□□ 1.29
UBE3B-206ENST00000536398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.08■■□□□ 1.29
UBE3B-206ENST00000536398 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.28
UBE3B-206ENST00000536398 PCF11O94913 1555 aaKnown RBP23.06■■□□□ 1.28
UBE3B-206ENST00000536398 LRRIQ1Q96JM4 1722 aa23.05■■□□□ 1.28
UBE3B-206ENST00000536398 ARAP3Q8WWN8 1544 aa23.04■■□□□ 1.28
UBE3B-206ENST00000536398 KDM4FA0A1W2PPD8 638 aa23.04■■□□□ 1.28
UBE3B-206ENST00000536398 CDK11AQ9UQ88 783 aaPredicted RBP23.04■■□□□ 1.28
UBE3B-206ENST00000536398 TTC37Q6PGP7 1564 aa23.04■■□□□ 1.28
UBE3B-206ENST00000536398 RAPGEF3O95398 923 aa23.03■■□□□ 1.28
UBE3B-206ENST00000536398 NEO1Q92859 1461 aa23.01■■□□□ 1.27
UBE3B-206ENST00000536398 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
UBE3B-206ENST00000536398 CEP162Q5TB80 1403 aa23■■□□□ 1.27
UBE3B-206ENST00000536398 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
UBE3B-206ENST00000536398 KIF14Q15058 1648 aa22.97■■□□□ 1.27
UBE3B-206ENST00000536398 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
UBE3B-206ENST00000536398 FANCAO15360 1455 aa22.97■■□□□ 1.27
UBE3B-206ENST00000536398 FYCO1Q9BQS8 1478 aa22.97■■□□□ 1.27
UBE3B-206ENST00000536398 PLCH2O75038 1416 aa22.95■■□□□ 1.26
UBE3B-206ENST00000536398 CCDC18Q5T9S5 1454 aa22.95■■□□□ 1.26
UBE3B-206ENST00000536398 FRMPD1Q5SYB0 1578 aa22.9■■□□□ 1.26
UBE3B-206ENST00000536398 DENND4BO75064 1496 aaPredicted RBP22.88■■□□□ 1.25
UBE3B-206ENST00000536398 ADGRL1O94910 1474 aa22.88■■□□□ 1.25
UBE3B-206ENST00000536398 EFCAB2Q5VUJ9 269 aa22.88■■□□□ 1.25
UBE3B-206ENST00000536398 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
UBE3B-206ENST00000536398 SCAPERQ9BY12 1400 aa22.84■■□□□ 1.25
UBE3B-206ENST00000536398 MYO5CQ9NQX4 1742 aa22.84■■□□□ 1.25
UBE3B-206ENST00000536398 ARHGAP5Q13017 1502 aa22.82■■□□□ 1.24
UBE3B-206ENST00000536398 RICTORQ6R327 1708 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms