RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 NISCHQ9Y2I1 1504 aa35■■■■□ 3.19
UBE3B-206ENST00000536398 CCDC180Q9P1Z9 1646 aa31.07■■■□□ 2.56
UBE3B-206ENST00000536398 ABCC9O60706 1549 aa30.8■■■□□ 2.52
UBE3B-206ENST00000536398 DCAF8L2P0C7V8 631 aa29.47■■■□□ 2.31
UBE3B-206ENST00000536398 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
UBE3B-206ENST00000536398 NACADO15069 1562 aa29.32■■■□□ 2.28
UBE3B-206ENST00000536398 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
UBE3B-206ENST00000536398 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
UBE3B-206ENST00000536398 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
UBE3B-206ENST00000536398 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
UBE3B-206ENST00000536398 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
UBE3B-206ENST00000536398 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
UBE3B-206ENST00000536398 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
UBE3B-206ENST00000536398 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
UBE3B-206ENST00000536398 SHROOM4Q9ULL8 1493 aa28.13■■■□□ 2.09
UBE3B-206ENST00000536398 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
UBE3B-206ENST00000536398 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
UBE3B-206ENST00000536398 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
UBE3B-206ENST00000536398 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
UBE3B-206ENST00000536398 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
UBE3B-206ENST00000536398 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
UBE3B-206ENST00000536398 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
UBE3B-206ENST00000536398 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
UBE3B-206ENST00000536398 SMARCA2P51531 1590 aa27■■□□□ 1.91
UBE3B-206ENST00000536398 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
UBE3B-206ENST00000536398 PEG3Q9GZU2 1588 aa26.87■■□□□ 1.89
UBE3B-206ENST00000536398 BAZ1BQ9UIG0 1483 aaKnown RBP26.86■■□□□ 1.89
UBE3B-206ENST00000536398 WIZO95785 1651 aa26.7■■□□□ 1.86
UBE3B-206ENST00000536398 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
UBE3B-206ENST00000536398 NESP48681 1621 aa26.61■■□□□ 1.85
UBE3B-206ENST00000536398 ERCC6Q03468 1493 aa26.5■■□□□ 1.83
UBE3B-206ENST00000536398 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
UBE3B-206ENST00000536398 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
UBE3B-206ENST00000536398 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
UBE3B-206ENST00000536398 CUX2O14529 1486 aa26.24■■□□□ 1.79
UBE3B-206ENST00000536398 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
UBE3B-206ENST00000536398 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
UBE3B-206ENST00000536398 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
UBE3B-206ENST00000536398 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
UBE3B-206ENST00000536398 CFTRP13569 1480 aa26.11■■□□□ 1.77
UBE3B-206ENST00000536398 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
UBE3B-206ENST00000536398 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
UBE3B-206ENST00000536398 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
UBE3B-206ENST00000536398 WDR62O43379 1518 aa25.9■■□□□ 1.74
UBE3B-206ENST00000536398 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
UBE3B-206ENST00000536398 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
UBE3B-206ENST00000536398 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
UBE3B-206ENST00000536398 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
UBE3B-206ENST00000536398 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
UBE3B-206ENST00000536398 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
UBE3B-206ENST00000536398 DNMBPQ6XZF7 1577 aa25.49■■□□□ 1.67
UBE3B-206ENST00000536398 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
UBE3B-206ENST00000536398 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
UBE3B-206ENST00000536398 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
UBE3B-206ENST00000536398 CUX1P39880 1505 aa25.34■■□□□ 1.65
UBE3B-206ENST00000536398 RAD54L2Q9Y4B4 1467 aa25.32■■□□□ 1.64
UBE3B-206ENST00000536398 TARBP1Q13395 1621 aaKnown RBP25.3■■□□□ 1.64
UBE3B-206ENST00000536398 SOGA1O94964 1423 aa25.28■■□□□ 1.64
UBE3B-206ENST00000536398 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.641e-6■■■■□ 25.4
UBE3B-206ENST00000536398 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
UBE3B-206ENST00000536398 EIF4G3O43432 1585 aaKnown RBP25.23■■□□□ 1.63
UBE3B-206ENST00000536398 TDRD9Q8NDG6 1382 aaKnown RBP25.21■■□□□ 1.63
UBE3B-206ENST00000536398 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
UBE3B-206ENST00000536398 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
UBE3B-206ENST00000536398 FBLN2P98095 1184 aa25.04■■□□□ 1.6
UBE3B-206ENST00000536398 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
UBE3B-206ENST00000536398 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
UBE3B-206ENST00000536398 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
UBE3B-206ENST00000536398 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
UBE3B-206ENST00000536398 ABCA10Q8WWZ4 1543 aa24.99■■□□□ 1.59
UBE3B-206ENST00000536398 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
UBE3B-206ENST00000536398 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
UBE3B-206ENST00000536398 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
UBE3B-206ENST00000536398 CHD1O14646 1710 aa24.95■■□□□ 1.58
UBE3B-206ENST00000536398 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
UBE3B-206ENST00000536398 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.58
UBE3B-206ENST00000536398 ABCA5Q8WWZ7 1642 aa24.89■■□□□ 1.57
UBE3B-206ENST00000536398 MAGI1Q96QZ7 1491 aaPredicted RBP24.88■■□□□ 1.57
UBE3B-206ENST00000536398 PBRM1Q86U86 1689 aa24.85■■□□□ 1.57
UBE3B-206ENST00000536398 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
UBE3B-206ENST00000536398 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
UBE3B-206ENST00000536398 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
UBE3B-206ENST00000536398 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
UBE3B-206ENST00000536398 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
UBE3B-206ENST00000536398 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
UBE3B-206ENST00000536398 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
UBE3B-206ENST00000536398 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
UBE3B-206ENST00000536398 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
UBE3B-206ENST00000536398 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.54
UBE3B-206ENST00000536398 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
UBE3B-206ENST00000536398 ARAP1Q96P48 1450 aa24.58■■□□□ 1.53
UBE3B-206ENST00000536398 IGF1RP08069 1367 aa24.56■■□□□ 1.52
UBE3B-206ENST00000536398 KIF27Q86VH2 1401 aa24.55■■□□□ 1.52
UBE3B-206ENST00000536398 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
UBE3B-206ENST00000536398 NUP160Q12769 1436 aa24.54■■□□□ 1.52
UBE3B-206ENST00000536398 ERCC6L2Q5T890 1561 aa24.42■■□□□ 1.5
UBE3B-206ENST00000536398 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
UBE3B-206ENST00000536398 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
UBE3B-206ENST00000536398 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
UBE3B-206ENST00000536398 CUL7Q14999 1698 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms