RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 EIF4G3O43432 1585 aaKnown RBP10.53□□□□□ -0.72
CDCA3-205ENST00000535871 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.72
CDCA3-205ENST00000535871 ZNF608Q9ULD9 1512 aaPredicted RBP10.52□□□□□ -0.73
CDCA3-205ENST00000535871 PBRM1Q86U86 1689 aa10.51□□□□□ -0.73
CDCA3-205ENST00000535871 AQRO60306 1485 aaKnown RBP eCLIP10.51□□□□□ -0.738e-7■■■■■ 27.4
CDCA3-205ENST00000535871 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
CDCA3-205ENST00000535871 FAM9AQ8IZU1 332 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-205ENST00000535871 ADAMTS12P58397 1594 aa10.49□□□□□ -0.73
CDCA3-205ENST00000535871 FOXD4L1Q9NU39 408 aa10.48□□□□□ -0.73
CDCA3-205ENST00000535871 SYNJ2O15056 1496 aa10.48□□□□□ -0.73
CDCA3-205ENST00000535871 SNAPC4Q5SXM2 1469 aa10.44□□□□□ -0.74
CDCA3-205ENST00000535871 GRIN2AQ12879 1464 aa10.42□□□□□ -0.74
CDCA3-205ENST00000535871 LOC105371045A0A1W2PR82 267 aa10.42□□□□□ -0.74
CDCA3-205ENST00000535871 UBTFP17480 764 aaKnown RBP10.42□□□□□ -0.74
CDCA3-205ENST00000535871 NUP160Q12769 1436 aa10.41□□□□□ -0.74
CDCA3-205ENST00000535871 KIAA0586Q9BVV6 1533 aa10.4□□□□□ -0.74
CDCA3-205ENST00000535871 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
CDCA3-205ENST00000535871 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
CDCA3-205ENST00000535871 CTTNBP2Q8WZ74 1663 aa10.38□□□□□ -0.75
CDCA3-205ENST00000535871 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
CDCA3-205ENST00000535871 EFCAB5A4FU69 1503 aa10.38□□□□□ -0.75
CDCA3-205ENST00000535871 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
CDCA3-205ENST00000535871 IQGAP2Q13576 1575 aa10.35□□□□□ -0.75
CDCA3-205ENST00000535871 CLIP1P30622 1438 aa10.35□□□□□ -0.75
CDCA3-205ENST00000535871 UGGT2Q9NYU1 1516 aa10.35□□□□□ -0.75
CDCA3-205ENST00000535871 SAMD9Q5K651 1589 aa10.31□□□□□ -0.76
CDCA3-205ENST00000535871 CEP170Q5SW79 1584 aa10.31□□□□□ -0.76
CDCA3-205ENST00000535871 ARHGAP35Q9NRY4 1499 aa10.3□□□□□ -0.76
CDCA3-205ENST00000535871 CHD1O14646 1710 aa10.29□□□□□ -0.76
CDCA3-205ENST00000535871 FMN1Q68DA7 1419 aa10.28□□□□□ -0.76
CDCA3-205ENST00000535871 CARMIL2Q6F5E8 1435 aa10.28□□□□□ -0.76
CDCA3-205ENST00000535871 VPS8Q8N3P4 1428 aa10.28□□□□□ -0.76
CDCA3-205ENST00000535871 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
CDCA3-205ENST00000535871 SHROOM2Q13796 1616 aa10.27□□□□□ -0.77
CDCA3-205ENST00000535871 FBLN2P98095 1184 aa10.26□□□□□ -0.77
CDCA3-205ENST00000535871 JPH4Q96JJ6 628 aa10.26□□□□□ -0.77
CDCA3-205ENST00000535871 ARAP1Q96P48 1450 aa10.24□□□□□ -0.77
CDCA3-205ENST00000535871 MAP3K1Q13233 1512 aa10.24□□□□□ -0.77
CDCA3-205ENST00000535871 OSCARQ8IYS5 282 aa10.24□□□□□ -0.77
CDCA3-205ENST00000535871 DISP1Q96F81 1524 aa10.23□□□□□ -0.77
CDCA3-205ENST00000535871 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
CDCA3-205ENST00000535871 MSH5O43196 834 aa10.22□□□□□ -0.77
CDCA3-205ENST00000535871 MAPK8IP2Q13387 824 aaPredicted RBP10.22□□□□□ -0.77
CDCA3-205ENST00000535871 RNF216Q9NWF9 866 aaPredicted RBP10.22□□□□□ -0.77
CDCA3-205ENST00000535871 CASKIN1Q8WXD9 1431 aa10.21□□□□□ -0.78
CDCA3-205ENST00000535871 FYCO1Q9BQS8 1478 aa10.21□□□□□ -0.78
CDCA3-205ENST00000535871 PRG4Q92954 1404 aaPredicted RBP10.18□□□□□ -0.78
CDCA3-205ENST00000535871 FHOD3Q2V2M9 1422 aa10.17□□□□□ -0.78
CDCA3-205ENST00000535871 CCDC18Q5T9S5 1454 aa10.16□□□□□ -0.78
CDCA3-205ENST00000535871 APLP2Q06481 763 aa10.14□□□□□ -0.79
CDCA3-205ENST00000535871 PTPRGP23470 1445 aa10.14□□□□□ -0.79
CDCA3-205ENST00000535871 HECW1Q76N89 1606 aa10.13□□□□□ -0.79
CDCA3-205ENST00000535871 UHRF1BP1LA0JNW5 1464 aa10.12□□□□□ -0.79
CDCA3-205ENST00000535871 ABCA8O94911 1581 aa10.11□□□□□ -0.79
CDCA3-205ENST00000535871 PCF11O94913 1555 aaKnown RBP10.11□□□□□ -0.79
CDCA3-205ENST00000535871 RAPGEF6Q8TEU7 1601 aa10.11□□□□□ -0.79
CDCA3-205ENST00000535871 RANGAP1P46060 587 aaPredicted RBP10.1□□□□□ -0.79
CDCA3-205ENST00000535871 FKBP8Q14318 412 aa10.1□□□□□ -0.79
CDCA3-205ENST00000535871 TIAM1Q13009 1591 aa10.09□□□□□ -0.79
CDCA3-205ENST00000535871 UACAQ9BZF9 1416 aa10.09□□□□□ -0.79
CDCA3-205ENST00000535871 CFAP43Q8NDM7 1665 aa10.09□□□□□ -0.79
CDCA3-205ENST00000535871 P3H3Q8IVL6 736 aa10.08□□□□□ -0.8
CDCA3-205ENST00000535871 CDK11AQ9UQ88 783 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-205ENST00000535871 NUP153P49790 1475 aaKnown RBP10.08□□□□□ -0.8
CDCA3-205ENST00000535871 EPRSP07814 1512 aaKnown RBP10.07□□□□□ -0.8
CDCA3-205ENST00000535871 ABCC2Q92887 1545 aa10.07□□□□□ -0.8
CDCA3-205ENST00000535871 LRRC9Q6ZRR7 1453 aa10.06□□□□□ -0.8
CDCA3-205ENST00000535871 PLB1Q6P1J6 1458 aa10.05□□□□□ -0.8
CDCA3-205ENST00000535871 ARHGEF11O15085 1522 aa10.04□□□□□ -0.8
CDCA3-205ENST00000535871 EHBP1L1Q8N3D4 1523 aa10.04□□□□□ -0.8
CDCA3-205ENST00000535871 KDM5BQ9UGL1 1544 aa10.04□□□□□ -0.8
CDCA3-205ENST00000535871 ERCC6L2Q5T890 1561 aa10.04□□□□□ -0.8
CDCA3-205ENST00000535871 SLC4A2P04920 1241 aa10.02□□□□□ -0.81
CDCA3-205ENST00000535871 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
CDCA3-205ENST00000535871 ATP10BO94823 1461 aa10.02□□□□□ -0.81
CDCA3-205ENST00000535871 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
CDCA3-205ENST00000535871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDCA3-205ENST00000535871 TROQ12816 1431 aaPredicted RBP10□□□□□ -0.81
CDCA3-205ENST00000535871 LRRIQ1Q96JM4 1722 aa10□□□□□ -0.81
CDCA3-205ENST00000535871 MYCNP04198 464 aaPredicted RBP10□□□□□ -0.81
CDCA3-205ENST00000535871 PLEKHD1A6NEE1 506 aa9.99□□□□□ -0.81
CDCA3-205ENST00000535871 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
CDCA3-205ENST00000535871 ADCY10Q96PN6 1610 aa9.98□□□□□ -0.81
CDCA3-205ENST00000535871 HOXD11P31277 338 aaPredicted RBP9.98□□□□□ -0.81
CDCA3-205ENST00000535871 SUPT6HQ7KZ85 1726 aaKnown RBP9.98□□□□□ -0.81
CDCA3-205ENST00000535871 KANK4Q5T7N3 995 aaPredicted RBP9.97□□□□□ -0.81
CDCA3-205ENST00000535871 RRBP1Q9P2E9 1410 aaKnown RBP9.97□□□□□ -0.81
CDCA3-205ENST00000535871 CDK13Q14004 1512 aaKnown RBP9.97□□□□□ -0.81
CDCA3-205ENST00000535871 RIMBP3CA6NJZ7 1639 aa9.96□□□□□ -0.81
CDCA3-205ENST00000535871 RIMBP3BA6NNM3 1639 aa9.96□□□□□ -0.81
CDCA3-205ENST00000535871 RIMBP3Q9UFD9 1639 aa9.96□□□□□ -0.81
CDCA3-205ENST00000535871 ATP1B4Q9UN42 357 aaPredicted RBP9.96□□□□□ -0.82
CDCA3-205ENST00000535871 MIA2Q96PC5 1412 aa9.96□□□□□ -0.82
CDCA3-205ENST00000535871 ZCCHC11Q5TAX3 1644 aaKnown RBP9.94□□□□□ -0.82
CDCA3-205ENST00000535871 MAGI3Q5TCQ9 1506 aa9.94□□□□□ -0.82
CDCA3-205ENST00000535871 NCOA2Q15596 1464 aa9.94□□□□□ -0.82
CDCA3-205ENST00000535871 KIF14Q15058 1648 aa9.93□□□□□ -0.82
CDCA3-205ENST00000535871 MAPKBP1O60336 1514 aa9.93□□□□□ -0.82
CDCA3-205ENST00000535871 MYOM3Q5VTT5 1437 aa9.93□□□□□ -0.82
CDCA3-205ENST00000535871 NPM1P06748 294 aaKnown RBP eCLIP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms