RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
TMEM258-203ENST00000535297 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
TMEM258-203ENST00000535297 JPH4Q96JJ6 628 aa23.45■■□□□ 1.34
TMEM258-203ENST00000535297 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
TMEM258-203ENST00000535297 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
TMEM258-203ENST00000535297 PRXQ9BXM0 1461 aa23.3■■□□□ 1.32
TMEM258-203ENST00000535297 EEA1Q15075 1411 aa23.26■■□□□ 1.31
TMEM258-203ENST00000535297 CTTNBP2Q8WZ74 1663 aa23.26■■□□□ 1.31
TMEM258-203ENST00000535297 CARMIL2Q6F5E8 1435 aa23.25■■□□□ 1.31
TMEM258-203ENST00000535297 UGGT2Q9NYU1 1516 aa23.23■■□□□ 1.31
TMEM258-203ENST00000535297 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
TMEM258-203ENST00000535297 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
TMEM258-203ENST00000535297 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
TMEM258-203ENST00000535297 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
TMEM258-203ENST00000535297 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
TMEM258-203ENST00000535297 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
TMEM258-203ENST00000535297 PTPRGP23470 1445 aa23.15■■□□□ 1.3
TMEM258-203ENST00000535297 KIAA0556O60303 1618 aa23.15■■□□□ 1.3
TMEM258-203ENST00000535297 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
TMEM258-203ENST00000535297 MAPKBP1O60336 1514 aa23.07■■□□□ 1.28
TMEM258-203ENST00000535297 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
TMEM258-203ENST00000535297 KIF21BO75037 1637 aa23.04■■□□□ 1.28
TMEM258-203ENST00000535297 UHRF1BP1LA0JNW5 1464 aa23.04■■□□□ 1.28
TMEM258-203ENST00000535297 TTBK1Q5TCY1 1321 aaPredicted RBP23.02■■□□□ 1.28
TMEM258-203ENST00000535297 UACAQ9BZF9 1416 aa23.01■■□□□ 1.27
TMEM258-203ENST00000535297 FAM9AQ8IZU1 332 aaPredicted RBP23.01■■□□□ 1.27
TMEM258-203ENST00000535297 ABCC2Q92887 1545 aa23.01■■□□□ 1.27
TMEM258-203ENST00000535297 KIF13AQ9H1H9 1805 aa22.99■■□□□ 1.27
TMEM258-203ENST00000535297 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
TMEM258-203ENST00000535297 SAMD9Q5K651 1589 aa22.94■■□□□ 1.26
TMEM258-203ENST00000535297 DIP2BQ9P265 1576 aa22.93■■□□□ 1.26
TMEM258-203ENST00000535297 KDM5BQ9UGL1 1544 aa22.91■■□□□ 1.26
TMEM258-203ENST00000535297 ABCA8O94911 1581 aa22.89■■□□□ 1.26
TMEM258-203ENST00000535297 PLB1Q6P1J6 1458 aa22.88■■□□□ 1.25
TMEM258-203ENST00000535297 ZCCHC11Q5TAX3 1644 aaKnown RBP22.87■■□□□ 1.25
TMEM258-203ENST00000535297 ASXL2Q76L83 1435 aa22.85■■□□□ 1.25
TMEM258-203ENST00000535297 FAM69CQ0P6D2 419 aa22.85■■□□□ 1.25
TMEM258-203ENST00000535297 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
TMEM258-203ENST00000535297 P3H3Q8IVL6 736 aa22.79■■□□□ 1.24
TMEM258-203ENST00000535297 GLI2P10070 1586 aa22.79■■□□□ 1.24
TMEM258-203ENST00000535297 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
TMEM258-203ENST00000535297 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
TMEM258-203ENST00000535297 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
TMEM258-203ENST00000535297 WDR7Q9Y4E6 1490 aa22.73■■□□□ 1.23
TMEM258-203ENST00000535297 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
TMEM258-203ENST00000535297 RANGAP1P46060 587 aaPredicted RBP22.72■■□□□ 1.23
TMEM258-203ENST00000535297 TSPOAP1O95153 1857 aa22.71■■□□□ 1.23
TMEM258-203ENST00000535297 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
TMEM258-203ENST00000535297 MAP3K4Q9Y6R4 1608 aa22.68■■□□□ 1.22
TMEM258-203ENST00000535297 PPRC1Q5VV67 1664 aaKnown RBP22.66■■□□□ 1.22
TMEM258-203ENST00000535297 ATP10BO94823 1461 aa22.66■■□□□ 1.22
TMEM258-203ENST00000535297 NUP153P49790 1475 aaKnown RBP22.64■■□□□ 1.21
TMEM258-203ENST00000535297 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
TMEM258-203ENST00000535297 KDM6BO15054 1643 aa22.6■■□□□ 1.21
TMEM258-203ENST00000535297 CFAP43Q8NDM7 1665 aa22.6■■□□□ 1.21
TMEM258-203ENST00000535297 ARID3CA6NKF2 412 aa22.58■■□□□ 1.21
TMEM258-203ENST00000535297 TEX14Q8IWB6 1497 aa22.58■■□□□ 1.2
TMEM258-203ENST00000535297 FMN1Q68DA7 1419 aa22.57■■□□□ 1.2
TMEM258-203ENST00000535297 KCNH8Q96L42 1107 aa22.52■■□□□ 1.2
TMEM258-203ENST00000535297 HECW1Q76N89 1606 aa22.52■■□□□ 1.2
TMEM258-203ENST00000535297 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.19
TMEM258-203ENST00000535297 CD109Q6YHK3 1445 aa22.51■■□□□ 1.19
TMEM258-203ENST00000535297 ABCA9Q8IUA7 1624 aa22.5■■□□□ 1.19
TMEM258-203ENST00000535297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
TMEM258-203ENST00000535297 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
TMEM258-203ENST00000535297 CDK13Q14004 1512 aaKnown RBP22.45■■□□□ 1.18
TMEM258-203ENST00000535297 CLIP1P30622 1438 aa22.43■■□□□ 1.18
TMEM258-203ENST00000535297 PLEKHD1A6NEE1 506 aa22.42■■□□□ 1.18
TMEM258-203ENST00000535297 COL17A1Q9UMD9 1497 aaPredicted RBP22.4■■□□□ 1.18
TMEM258-203ENST00000535297 PCF11O94913 1555 aaKnown RBP22.39■■□□□ 1.18
TMEM258-203ENST00000535297 CASKIN1Q8WXD9 1431 aa22.37■■□□□ 1.17
TMEM258-203ENST00000535297 LRRIQ1Q96JM4 1722 aa22.37■■□□□ 1.17
TMEM258-203ENST00000535297 ATP1B4Q9UN42 357 aaPredicted RBP22.35■■□□□ 1.17
TMEM258-203ENST00000535297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.34■■□□□ 1.171e-9■■■■■ 62
TMEM258-203ENST00000535297 FYCO1Q9BQS8 1478 aa22.34■■□□□ 1.17
TMEM258-203ENST00000535297 PHLDB1Q86UU1 1377 aa22.33■■□□□ 1.17
TMEM258-203ENST00000535297 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.16
TMEM258-203ENST00000535297 NEO1Q92859 1461 aa22.33■■□□□ 1.16
TMEM258-203ENST00000535297 TTC37Q6PGP7 1564 aa22.33■■□□□ 1.16
TMEM258-203ENST00000535297 ARAP3Q8WWN8 1544 aa22.32■■□□□ 1.16
TMEM258-203ENST00000535297 CDK11AQ9UQ88 783 aaPredicted RBP22.31■■□□□ 1.16
TMEM258-203ENST00000535297 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
TMEM258-203ENST00000535297 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
TMEM258-203ENST00000535297 TROQ12816 1431 aaPredicted RBP22.28■■□□□ 1.16
TMEM258-203ENST00000535297 KIF14Q15058 1648 aa22.28■■□□□ 1.16
TMEM258-203ENST00000535297 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
TMEM258-203ENST00000535297 FANCAO15360 1455 aa22.22■■□□□ 1.15
TMEM258-203ENST00000535297 PLCH2O75038 1416 aa22.2■■□□□ 1.14
TMEM258-203ENST00000535297 FRMPD1Q5SYB0 1578 aa22.18■■□□□ 1.14
TMEM258-203ENST00000535297 AKNAQ7Z591 1439 aa22.18■■□□□ 1.14
TMEM258-203ENST00000535297 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
TMEM258-203ENST00000535297 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
TMEM258-203ENST00000535297 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
TMEM258-203ENST00000535297 RICTORQ6R327 1708 aa22.14■■□□□ 1.14
TMEM258-203ENST00000535297 ADGRL1O94910 1474 aa22.11■■□□□ 1.13
TMEM258-203ENST00000535297 PREX2Q70Z35 1606 aa22.11■■□□□ 1.13
TMEM258-203ENST00000535297 RAPGEF3O95398 923 aa22.11■■□□□ 1.13
TMEM258-203ENST00000535297 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
TMEM258-203ENST00000535297 ZMYM4Q5VZL5 1548 aa22.09■■□□□ 1.13
TMEM258-203ENST00000535297 KDM4FA0A1W2PPD8 638 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms