RNA–Protein interactions for RNA: ENST00000534770.1

TAF1D-220, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, humanhuman

TSL 3

Gene TAF1D, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF1D-220ENST00000534770 NUP160Q12769 1436 aa25.83■■□□□ 1.73
TAF1D-220ENST00000534770 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
TAF1D-220ENST00000534770 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
TAF1D-220ENST00000534770 RAPGEF2Q9Y4G8 1499 aa25.71■■□□□ 1.71
TAF1D-220ENST00000534770 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
TAF1D-220ENST00000534770 KIAA0586Q9BVV6 1533 aa25.63■■□□□ 1.69
TAF1D-220ENST00000534770 EEA1Q15075 1411 aa25.63■■□□□ 1.69
TAF1D-220ENST00000534770 PRG4Q92954 1404 aaPredicted RBP25.61■■□□□ 1.69
TAF1D-220ENST00000534770 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
TAF1D-220ENST00000534770 ERCC6L2Q5T890 1561 aa25.6■■□□□ 1.69
TAF1D-220ENST00000534770 SHROOM2Q13796 1616 aa25.57■■□□□ 1.68
TAF1D-220ENST00000534770 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
TAF1D-220ENST00000534770 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
TAF1D-220ENST00000534770 TTBK1Q5TCY1 1321 aaPredicted RBP25.46■■□□□ 1.67
TAF1D-220ENST00000534770 CARMIL2Q6F5E8 1435 aa25.39■■□□□ 1.66
TAF1D-220ENST00000534770 CTTNBP2Q8WZ74 1663 aa25.37■■□□□ 1.65
TAF1D-220ENST00000534770 RANGAP1P46060 587 aaPredicted RBP25.36■■□□□ 1.65
TAF1D-220ENST00000534770 KIF21BO75037 1637 aa25.34■■□□□ 1.65
TAF1D-220ENST00000534770 UGGT2Q9NYU1 1516 aa25.33■■□□□ 1.65
TAF1D-220ENST00000534770 UBTFP17480 764 aaKnown RBP25.33■■□□□ 1.65
TAF1D-220ENST00000534770 DISP1Q96F81 1524 aa25.32■■□□□ 1.64
TAF1D-220ENST00000534770 PTPRGP23470 1445 aa25.31■■□□□ 1.64
TAF1D-220ENST00000534770 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
TAF1D-220ENST00000534770 P3H3Q8IVL6 736 aa25.28■■□□□ 1.64
TAF1D-220ENST00000534770 GOLGA3Q08378 1498 aa25.26■■□□□ 1.63
TAF1D-220ENST00000534770 KIAA0556O60303 1618 aa25.23■■□□□ 1.63
TAF1D-220ENST00000534770 NPM1P06748 294 aaKnown RBP eCLIP25.18■■□□□ 1.62
TAF1D-220ENST00000534770 ADCY10Q96PN6 1610 aa25.12■■□□□ 1.61
TAF1D-220ENST00000534770 UACAQ9BZF9 1416 aa25.11■■□□□ 1.61
TAF1D-220ENST00000534770 SAMD9Q5K651 1589 aa25.06■■□□□ 1.6
TAF1D-220ENST00000534770 PLB1Q6P1J6 1458 aa25.05■■□□□ 1.6
TAF1D-220ENST00000534770 FHOD3Q2V2M9 1422 aa25.04■■□□□ 1.6
TAF1D-220ENST00000534770 UHRF1BP1LA0JNW5 1464 aa25.02■■□□□ 1.6
TAF1D-220ENST00000534770 ABCC2Q92887 1545 aa25.02■■□□□ 1.6
TAF1D-220ENST00000534770 ARID3CA6NKF2 412 aa25■■□□□ 1.59
TAF1D-220ENST00000534770 FAM69CQ0P6D2 419 aa25■■□□□ 1.59
TAF1D-220ENST00000534770 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
TAF1D-220ENST00000534770 EFCAB5A4FU69 1503 aa24.97■■□□□ 1.59
TAF1D-220ENST00000534770 ABCA8O94911 1581 aa24.95■■□□□ 1.58
TAF1D-220ENST00000534770 ARHGAP35Q9NRY4 1499 aa24.93■■□□□ 1.58
TAF1D-220ENST00000534770 KIF13AQ9H1H9 1805 aa24.93■■□□□ 1.58
TAF1D-220ENST00000534770 ABCC10Q5T3U5 1492 aa24.91■■□□□ 1.58
TAF1D-220ENST00000534770 MAPKBP1O60336 1514 aa24.91■■□□□ 1.58
TAF1D-220ENST00000534770 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
TAF1D-220ENST00000534770 ASXL2Q76L83 1435 aa24.88■■□□□ 1.57
TAF1D-220ENST00000534770 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
TAF1D-220ENST00000534770 ZCCHC11Q5TAX3 1644 aaKnown RBP24.87■■□□□ 1.57
TAF1D-220ENST00000534770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.87■■□□□ 1.57
TAF1D-220ENST00000534770 HNRNPUL2Q1KMD3 747 aaKnown RBP24.87■■□□□ 1.57
TAF1D-220ENST00000534770 CLIP1P30622 1438 aa24.85■■□□□ 1.57
TAF1D-220ENST00000534770 RAPGEF6Q8TEU7 1601 aa24.84■■□□□ 1.57
TAF1D-220ENST00000534770 ATP10BO94823 1461 aa24.82■■□□□ 1.56
TAF1D-220ENST00000534770 KCNH8Q96L42 1107 aa24.8■■□□□ 1.56
TAF1D-220ENST00000534770 DIP2BQ9P265 1576 aa24.8■■□□□ 1.56
TAF1D-220ENST00000534770 FMN1Q68DA7 1419 aa24.79■■□□□ 1.56
TAF1D-220ENST00000534770 NUP153P49790 1475 aaKnown RBP24.78■■□□□ 1.56
TAF1D-220ENST00000534770 CEP162Q5TB80 1403 aa24.75■■□□□ 1.55
TAF1D-220ENST00000534770 WDR7Q9Y4E6 1490 aa24.74■■□□□ 1.55
TAF1D-220ENST00000534770 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
TAF1D-220ENST00000534770 PLEKHD1A6NEE1 506 aa24.67■■□□□ 1.54
TAF1D-220ENST00000534770 CDK13Q14004 1512 aaKnown RBP24.66■■□□□ 1.54
TAF1D-220ENST00000534770 KDM6BO15054 1643 aa24.64■■□□□ 1.53
TAF1D-220ENST00000534770 HECW1Q76N89 1606 aa24.64■■□□□ 1.53
TAF1D-220ENST00000534770 TSPOAP1O95153 1857 aa24.63■■□□□ 1.53
TAF1D-220ENST00000534770 GLI2P10070 1586 aa24.63■■□□□ 1.53
TAF1D-220ENST00000534770 CASKIN1Q8WXD9 1431 aa24.61■■□□□ 1.53
TAF1D-220ENST00000534770 PCF11O94913 1555 aaKnown RBP24.6■■□□□ 1.53
TAF1D-220ENST00000534770 CDK11AQ9UQ88 783 aaPredicted RBP24.56■■□□□ 1.52
TAF1D-220ENST00000534770 CD109Q6YHK3 1445 aa24.55■■□□□ 1.52
TAF1D-220ENST00000534770 FYCO1Q9BQS8 1478 aa24.53■■□□□ 1.52
TAF1D-220ENST00000534770 MAP3K4Q9Y6R4 1608 aa24.52■■□□□ 1.52
TAF1D-220ENST00000534770 KDM4FA0A1W2PPD8 638 aa24.5■■□□□ 1.51
TAF1D-220ENST00000534770 LRRIQ1Q96JM4 1722 aa24.49■■□□□ 1.51
TAF1D-220ENST00000534770 CCDC18Q5T9S5 1454 aa24.48■■□□□ 1.51
TAF1D-220ENST00000534770 PPRC1Q5VV67 1664 aaKnown RBP24.47■■□□□ 1.51
TAF1D-220ENST00000534770 CFAP43Q8NDM7 1665 aa24.46■■□□□ 1.51
TAF1D-220ENST00000534770 TEX14Q8IWB6 1497 aa24.45■■□□□ 1.5
TAF1D-220ENST00000534770 TROQ12816 1431 aaPredicted RBP24.44■■□□□ 1.5
TAF1D-220ENST00000534770 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
TAF1D-220ENST00000534770 MAGI3Q5TCQ9 1506 aa24.42■■□□□ 1.5
TAF1D-220ENST00000534770 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
TAF1D-220ENST00000534770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.4■■□□□ 1.5
TAF1D-220ENST00000534770 TTC37Q6PGP7 1564 aa24.36■■□□□ 1.49
TAF1D-220ENST00000534770 COL17A1Q9UMD9 1497 aaPredicted RBP24.35■■□□□ 1.49
TAF1D-220ENST00000534770 KIF14Q15058 1648 aa24.35■■□□□ 1.49
TAF1D-220ENST00000534770 MTUS2Q5JR59 1369 aa24.33■■□□□ 1.49
TAF1D-220ENST00000534770 PLCH2O75038 1416 aa24.28■■□□□ 1.48
TAF1D-220ENST00000534770 FANCAO15360 1455 aa24.26■■□□□ 1.47
TAF1D-220ENST00000534770 NEO1Q92859 1461 aa24.26■■□□□ 1.47
TAF1D-220ENST00000534770 APLP2Q06481 763 aa24.25■■□□□ 1.47
TAF1D-220ENST00000534770 EFCAB2Q5VUJ9 269 aa24.25■■□□□ 1.47
TAF1D-220ENST00000534770 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
TAF1D-220ENST00000534770 AKNAQ7Z591 1439 aa24.24■■□□□ 1.47
TAF1D-220ENST00000534770 ADGRL1O94910 1474 aa24.24■■□□□ 1.47
TAF1D-220ENST00000534770 RAPGEF3O95398 923 aa24.23■■□□□ 1.47
TAF1D-220ENST00000534770 TIAM1Q13009 1591 aa24.22■■□□□ 1.47
TAF1D-220ENST00000534770 ARHGAP5Q13017 1502 aa24.2■■□□□ 1.47
TAF1D-220ENST00000534770 ARAP3Q8WWN8 1544 aa24.2■■□□□ 1.47
TAF1D-220ENST00000534770 KANK4Q5T7N3 995 aaPredicted RBP24.2■■□□□ 1.46
TAF1D-220ENST00000534770 MYO5CQ9NQX4 1742 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms