RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 CUX1P39880 1505 aa14.42□□□□□ -0.1
LINC00958-207ENST00000534477 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
LINC00958-207ENST00000534477 CHMP7Q8WUX9 453 aaPredicted RBP14.4□□□□□ -0.1
LINC00958-207ENST00000534477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.1
LINC00958-207ENST00000534477 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
LINC00958-207ENST00000534477 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
LINC00958-207ENST00000534477 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
LINC00958-207ENST00000534477 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
LINC00958-207ENST00000534477 ATXN8OSP0DMR3 200 aa14.32□□□□□ -0.12
LINC00958-207ENST00000534477 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
LINC00958-207ENST00000534477 PBRM1Q86U86 1689 aa14.32□□□□□ -0.12
LINC00958-207ENST00000534477 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
LINC00958-207ENST00000534477 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
LINC00958-207ENST00000534477 CLASP1Q7Z460 1538 aa14.29□□□□□ -0.12
LINC00958-207ENST00000534477 ABCA10Q8WWZ4 1543 aa14.24□□□□□ -0.13
LINC00958-207ENST00000534477 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
LINC00958-207ENST00000534477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
LINC00958-207ENST00000534477 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
LINC00958-207ENST00000534477 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
LINC00958-207ENST00000534477 U3KPZ7 1027 aaPredicted RBP14.17□□□□□ -0.14
LINC00958-207ENST00000534477 GRIN2AQ12879 1464 aa14.17□□□□□ -0.14
LINC00958-207ENST00000534477 TOP2BQ02880 1626 aa14.16□□□□□ -0.14
LINC00958-207ENST00000534477 SAMD1Q6SPF0 538 aaPredicted RBP14.16□□□□□ -0.14
LINC00958-207ENST00000534477 ADAMTS12P58397 1594 aa14.16□□□□□ -0.14
LINC00958-207ENST00000534477 BIVM-ERCC5R4GMW8 1640 aa14.15□□□□□ -0.14
LINC00958-207ENST00000534477 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
LINC00958-207ENST00000534477 RNF39Q9H2S5 420 aa14.13□□□□□ -0.15
LINC00958-207ENST00000534477 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
LINC00958-207ENST00000534477 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
LINC00958-207ENST00000534477 NUP160Q12769 1436 aa14.07□□□□□ -0.16
LINC00958-207ENST00000534477 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
LINC00958-207ENST00000534477 SHROOM2Q13796 1616 aa14.01□□□□□ -0.17
LINC00958-207ENST00000534477 PRG4Q92954 1404 aaPredicted RBP14.01□□□□□ -0.17
LINC00958-207ENST00000534477 APLP2Q06481 763 aa14.01□□□□□ -0.17
LINC00958-207ENST00000534477 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
LINC00958-207ENST00000534477 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
LINC00958-207ENST00000534477 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
LINC00958-207ENST00000534477 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
LINC00958-207ENST00000534477 TTBK1Q5TCY1 1321 aaPredicted RBP13.96□□□□□ -0.17
LINC00958-207ENST00000534477 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
LINC00958-207ENST00000534477 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
LINC00958-207ENST00000534477 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC00958-207ENST00000534477 KIF13AQ9H1H9 1805 aa13.88□□□□□ -0.19
LINC00958-207ENST00000534477 CUL7Q14999 1698 aa13.88□□□□□ -0.19
LINC00958-207ENST00000534477 IGF1RP08069 1367 aa13.87□□□□□ -0.19
LINC00958-207ENST00000534477 FAM69CQ0P6D2 419 aa13.87□□□□□ -0.19
LINC00958-207ENST00000534477 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
LINC00958-207ENST00000534477 ADCY10Q96PN6 1610 aa13.84□□□□□ -0.19
LINC00958-207ENST00000534477 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
LINC00958-207ENST00000534477 TSPOAP1O95153 1857 aa13.8□□□□□ -0.2
LINC00958-207ENST00000534477 ABCC10Q5T3U5 1492 aa13.8□□□□□ -0.2
LINC00958-207ENST00000534477 PTPRGP23470 1445 aa13.79□□□□□ -0.2
LINC00958-207ENST00000534477 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
LINC00958-207ENST00000534477 DIP2BQ9P265 1576 aa13.78□□□□□ -0.2
LINC00958-207ENST00000534477 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
LINC00958-207ENST00000534477 CARMIL2Q6F5E8 1435 aa13.76□□□□□ -0.21
LINC00958-207ENST00000534477 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
LINC00958-207ENST00000534477 TNIKQ9UKE5 1360 aa13.73□□□□□ -0.21
LINC00958-207ENST00000534477 KDM6BO15054 1643 aa13.72□□□□□ -0.21
LINC00958-207ENST00000534477 FKBP8Q14318 412 aa13.71□□□□□ -0.21
LINC00958-207ENST00000534477 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
LINC00958-207ENST00000534477 ABCC2Q92887 1545 aa13.68□□□□□ -0.22
LINC00958-207ENST00000534477 ASXL2Q76L83 1435 aa13.67□□□□□ -0.22
LINC00958-207ENST00000534477 UACAQ9BZF9 1416 aa13.65□□□□□ -0.22
LINC00958-207ENST00000534477 DISP1Q96F81 1524 aa13.65□□□□□ -0.22
LINC00958-207ENST00000534477 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
LINC00958-207ENST00000534477 PLB1Q6P1J6 1458 aa13.63□□□□□ -0.23
LINC00958-207ENST00000534477 CAPN15O75808 1086 aa13.63□□□□□ -0.23
LINC00958-207ENST00000534477 KIAA0556O60303 1618 aa13.63□□□□□ -0.23
LINC00958-207ENST00000534477 UGGT2Q9NYU1 1516 aa13.61□□□□□ -0.23
LINC00958-207ENST00000534477 UHRF1BP1LA0JNW5 1464 aa13.61□□□□□ -0.23
LINC00958-207ENST00000534477 CTTNBP2Q8WZ74 1663 aa13.6□□□□□ -0.23
LINC00958-207ENST00000534477 ZCCHC11Q5TAX3 1644 aaKnown RBP13.6□□□□□ -0.23
LINC00958-207ENST00000534477 ARID3CA6NKF2 412 aa13.58□□□□□ -0.24
LINC00958-207ENST00000534477 PPRC1Q5VV67 1664 aaKnown RBP13.58□□□□□ -0.24
LINC00958-207ENST00000534477 KDM4FA0A1W2PPD8 638 aa13.57□□□□□ -0.24
LINC00958-207ENST00000534477 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
LINC00958-207ENST00000534477 KDM5BQ9UGL1 1544 aa13.56□□□□□ -0.24
LINC00958-207ENST00000534477 GLI2P10070 1586 aa13.56□□□□□ -0.24
LINC00958-207ENST00000534477 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
LINC00958-207ENST00000534477 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
LINC00958-207ENST00000534477 GOLGA3Q08378 1498 aa13.54□□□□□ -0.24
LINC00958-207ENST00000534477 RANGAP1P46060 587 aaPredicted RBP13.53□□□□□ -0.24
LINC00958-207ENST00000534477 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
LINC00958-207ENST00000534477 WDR7Q9Y4E6 1490 aa13.52□□□□□ -0.25
LINC00958-207ENST00000534477 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
LINC00958-207ENST00000534477 COL17A1Q9UMD9 1497 aaPredicted RBP13.49□□□□□ -0.25
LINC00958-207ENST00000534477 FAM9AQ8IZU1 332 aaPredicted RBP13.49□□□□□ -0.25
LINC00958-207ENST00000534477 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
LINC00958-207ENST00000534477 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
LINC00958-207ENST00000534477 POLA2Q14181 598 aa13.48□□□□□ -0.25
LINC00958-207ENST00000534477 ABCA8O94911 1581 aa13.48□□□□□ -0.25
LINC00958-207ENST00000534477 CD109Q6YHK3 1445 aa13.46□□□□□ -0.26
LINC00958-207ENST00000534477 CFAP43Q8NDM7 1665 aa13.43□□□□□ -0.26
LINC00958-207ENST00000534477 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
LINC00958-207ENST00000534477 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
LINC00958-207ENST00000534477 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
LINC00958-207ENST00000534477 ATP10BO94823 1461 aa13.38□□□□□ -0.27
LINC00958-207ENST00000534477 ABCB7O75027 752 aa13.38□□□□□ -0.27
LINC00958-207ENST00000534477 DSG3P32926 999 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms