RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 AEBP2Q6ZN18 517 aaPredicted RBP22.51■■□□□ 1.19
LINC00958-207ENST00000534477 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
LINC00958-207ENST00000534477 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
LINC00958-207ENST00000534477 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
LINC00958-207ENST00000534477 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
LINC00958-207ENST00000534477 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
LINC00958-207ENST00000534477 ABCC9O60706 1549 aa17.99■□□□□ 0.47
LINC00958-207ENST00000534477 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
LINC00958-207ENST00000534477 FOXD1Q16676 465 aa17.82■□□□□ 0.44
LINC00958-207ENST00000534477 ADRA2BP18089 450 aa17.2■□□□□ 0.34
LINC00958-207ENST00000534477 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
LINC00958-207ENST00000534477 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
LINC00958-207ENST00000534477 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
LINC00958-207ENST00000534477 NACADO15069 1562 aa16.85■□□□□ 0.29
LINC00958-207ENST00000534477 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
LINC00958-207ENST00000534477 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00958-207ENST00000534477 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
LINC00958-207ENST00000534477 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
LINC00958-207ENST00000534477 MSH5O43196 834 aa16.54■□□□□ 0.24
LINC00958-207ENST00000534477 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
LINC00958-207ENST00000534477 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
LINC00958-207ENST00000534477 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
LINC00958-207ENST00000534477 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
LINC00958-207ENST00000534477 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
LINC00958-207ENST00000534477 KCNA4P22459 653 aa16.22■□□□□ 0.19
LINC00958-207ENST00000534477 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
LINC00958-207ENST00000534477 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
LINC00958-207ENST00000534477 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
LINC00958-207ENST00000534477 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
LINC00958-207ENST00000534477 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
LINC00958-207ENST00000534477 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
LINC00958-207ENST00000534477 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
LINC00958-207ENST00000534477 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
LINC00958-207ENST00000534477 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
LINC00958-207ENST00000534477 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
LINC00958-207ENST00000534477 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
LINC00958-207ENST00000534477 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
LINC00958-207ENST00000534477 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
LINC00958-207ENST00000534477 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
LINC00958-207ENST00000534477 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
LINC00958-207ENST00000534477 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
LINC00958-207ENST00000534477 POTEDQ86YR6 584 aa15.49■□□□□ 0.07
LINC00958-207ENST00000534477 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
LINC00958-207ENST00000534477 DNAJC5Q9H3Z4 198 aa15.46■□□□□ 0.07
LINC00958-207ENST00000534477 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
LINC00958-207ENST00000534477 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
LINC00958-207ENST00000534477 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
LINC00958-207ENST00000534477 NESP48681 1621 aa15.43■□□□□ 0.06
LINC00958-207ENST00000534477 CUX2O14529 1486 aa15.41■□□□□ 0.06
LINC00958-207ENST00000534477 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
LINC00958-207ENST00000534477 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
LINC00958-207ENST00000534477 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
LINC00958-207ENST00000534477 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
LINC00958-207ENST00000534477 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
LINC00958-207ENST00000534477 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
LINC00958-207ENST00000534477 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
LINC00958-207ENST00000534477 WIZO95785 1651 aa15.2■□□□□ 0.02
LINC00958-207ENST00000534477 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
LINC00958-207ENST00000534477 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
LINC00958-207ENST00000534477 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
LINC00958-207ENST00000534477 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
LINC00958-207ENST00000534477 MRC2Q9UBG0 1479 aa15.06■□□□□ 0
LINC00958-207ENST00000534477 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
LINC00958-207ENST00000534477 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
LINC00958-207ENST00000534477 WDR62O43379 1518 aa14.99□□□□□ -0.01
LINC00958-207ENST00000534477 FANCD2Q9BXW9 1451 aa14.98□□□□□ -0.01
LINC00958-207ENST00000534477 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.02
LINC00958-207ENST00000534477 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
LINC00958-207ENST00000534477 CFTRP13569 1480 aa14.91□□□□□ -0.02
LINC00958-207ENST00000534477 ZBTB22O15209 634 aa14.91□□□□□ -0.02
LINC00958-207ENST00000534477 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
LINC00958-207ENST00000534477 URB2Q14146 1524 aaKnown RBP14.85□□□□□ -0.03
LINC00958-207ENST00000534477 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
LINC00958-207ENST00000534477 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
LINC00958-207ENST00000534477 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
LINC00958-207ENST00000534477 ZNF608Q9ULD9 1512 aaPredicted RBP14.7□□□□□ -0.06
LINC00958-207ENST00000534477 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
LINC00958-207ENST00000534477 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
LINC00958-207ENST00000534477 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
LINC00958-207ENST00000534477 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
LINC00958-207ENST00000534477 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
LINC00958-207ENST00000534477 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
LINC00958-207ENST00000534477 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
LINC00958-207ENST00000534477 FBLN2P98095 1184 aa14.59□□□□□ -0.07
LINC00958-207ENST00000534477 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
LINC00958-207ENST00000534477 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
LINC00958-207ENST00000534477 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
LINC00958-207ENST00000534477 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC00958-207ENST00000534477 CHD1O14646 1710 aa14.53□□□□□ -0.08
LINC00958-207ENST00000534477 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
LINC00958-207ENST00000534477 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.08
LINC00958-207ENST00000534477 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
LINC00958-207ENST00000534477 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
LINC00958-207ENST00000534477 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
LINC00958-207ENST00000534477 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
LINC00958-207ENST00000534477 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
LINC00958-207ENST00000534477 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
LINC00958-207ENST00000534477 SOGA1O94964 1423 aa14.49□□□□□ -0.09
LINC00958-207ENST00000534477 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
LINC00958-207ENST00000534477 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms