RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 PRG4Q92954 1404 aaPredicted RBP30.31■■■□□ 2.44
VPS51-213ENST00000533827 CUL7Q14999 1698 aa30.3■■■□□ 2.44
VPS51-213ENST00000533827 KIAA0586Q9BVV6 1533 aa30.2■■■□□ 2.42
VPS51-213ENST00000533827 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
VPS51-213ENST00000533827 ADCY10Q96PN6 1610 aa29.96■■■□□ 2.39
VPS51-213ENST00000533827 KIF13AQ9H1H9 1805 aa29.94■■■□□ 2.38
VPS51-213ENST00000533827 IQGAP2Q13576 1575 aa29.93■■■□□ 2.38
VPS51-213ENST00000533827 NPM1P06748 294 aaKnown RBP eCLIP29.91■■■□□ 2.38
VPS51-213ENST00000533827 RAPGEF2Q9Y4G8 1499 aa29.91■■■□□ 2.38
VPS51-213ENST00000533827 MAPKBP1O60336 1514 aa29.9■■■□□ 2.38
VPS51-213ENST00000533827 CARMIL2Q6F5E8 1435 aa29.88■■■□□ 2.37
VPS51-213ENST00000533827 PTPRGP23470 1445 aa29.87■■■□□ 2.37
VPS51-213ENST00000533827 TNIKQ9UKE5 1360 aa29.84■■■□□ 2.37
VPS51-213ENST00000533827 ABCC10Q5T3U5 1492 aa29.84■■■□□ 2.37
VPS51-213ENST00000533827 DISP1Q96F81 1524 aa29.79■■■□□ 2.36
VPS51-213ENST00000533827 FAM69CQ0P6D2 419 aa29.77■■■□□ 2.36
VPS51-213ENST00000533827 DIP2BQ9P265 1576 aa29.77■■■□□ 2.36
VPS51-213ENST00000533827 UGGT2Q9NYU1 1516 aa29.76■■■□□ 2.36
VPS51-213ENST00000533827 TTBK1Q5TCY1 1321 aaPredicted RBP29.75■■■□□ 2.35
VPS51-213ENST00000533827 ABCC2Q92887 1545 aa29.7■■■□□ 2.34
VPS51-213ENST00000533827 UHRF1BP1LA0JNW5 1464 aa29.68■■■□□ 2.34
VPS51-213ENST00000533827 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
VPS51-213ENST00000533827 CTTNBP2Q8WZ74 1663 aa29.67■■■□□ 2.34
VPS51-213ENST00000533827 KIAA0556O60303 1618 aa29.67■■■□□ 2.34
VPS51-213ENST00000533827 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
VPS51-213ENST00000533827 ASXL2Q76L83 1435 aa29.56■■■□□ 2.32
VPS51-213ENST00000533827 PLB1Q6P1J6 1458 aa29.55■■■□□ 2.32
VPS51-213ENST00000533827 KDM5BQ9UGL1 1544 aa29.54■■■□□ 2.32
VPS51-213ENST00000533827 GOLGA3Q08378 1498 aa29.52■■■□□ 2.32
VPS51-213ENST00000533827 TSPOAP1O95153 1857 aa29.51■■■□□ 2.31
VPS51-213ENST00000533827 GLI2P10070 1586 aa29.49■■■□□ 2.31
VPS51-213ENST00000533827 ZCCHC11Q5TAX3 1644 aaKnown RBP29.47■■■□□ 2.31
VPS51-213ENST00000533827 CSRNP3Q8WYN3 585 aa29.47■■■□□ 2.31
VPS51-213ENST00000533827 KDM6BO15054 1643 aa29.45■■■□□ 2.3
VPS51-213ENST00000533827 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
VPS51-213ENST00000533827 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
VPS51-213ENST00000533827 PPRC1Q5VV67 1664 aaKnown RBP29.4■■■□□ 2.3
VPS51-213ENST00000533827 ABCA8O94911 1581 aa29.39■■■□□ 2.3
VPS51-213ENST00000533827 EEA1Q15075 1411 aa29.38■■■□□ 2.29
VPS51-213ENST00000533827 MAP3K4Q9Y6R4 1608 aa29.34■■■□□ 2.29
VPS51-213ENST00000533827 WDR7Q9Y4E6 1490 aa29.3■■■□□ 2.28
VPS51-213ENST00000533827 SAMD9Q5K651 1589 aa29.27■■■□□ 2.28
VPS51-213ENST00000533827 P3H3Q8IVL6 736 aa29.25■■■□□ 2.27
VPS51-213ENST00000533827 TEX14Q8IWB6 1497 aa29.21■■■□□ 2.27
VPS51-213ENST00000533827 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.26
VPS51-213ENST00000533827 COL17A1Q9UMD9 1497 aaPredicted RBP29.17■■■□□ 2.26
VPS51-213ENST00000533827 KIF21BO75037 1637 aa29.15■■■□□ 2.26
VPS51-213ENST00000533827 ATP10BO94823 1461 aa29.14■■■□□ 2.26
VPS51-213ENST00000533827 CFAP43Q8NDM7 1665 aa29.14■■■□□ 2.26
VPS51-213ENST00000533827 KCNH8Q96L42 1107 aa29.13■■■□□ 2.25
VPS51-213ENST00000533827 CD109Q6YHK3 1445 aa29.11■■■□□ 2.25
VPS51-213ENST00000533827 MAGI3Q5TCQ9 1506 aa29.1■■■□□ 2.25
VPS51-213ENST00000533827 RAPGEF6Q8TEU7 1601 aa29.1■■■□□ 2.25
VPS51-213ENST00000533827 ARID3CA6NKF2 412 aa29.09■■■□□ 2.25
VPS51-213ENST00000533827 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
VPS51-213ENST00000533827 KDM4FA0A1W2PPD8 638 aa29.07■■■□□ 2.24
VPS51-213ENST00000533827 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
VPS51-213ENST00000533827 FHOD3Q2V2M9 1422 aa29.04■■■□□ 2.24
VPS51-213ENST00000533827 NUP153P49790 1475 aaKnown RBP29■■■□□ 2.23
VPS51-213ENST00000533827 EFCAB5A4FU69 1503 aa28.99■■■□□ 2.23
VPS51-213ENST00000533827 ABCA9Q8IUA7 1624 aa28.96■■■□□ 2.23
VPS51-213ENST00000533827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.92■■■□□ 2.22
VPS51-213ENST00000533827 HNRNPUL2Q1KMD3 747 aaKnown RBP28.92■■■□□ 2.22
VPS51-213ENST00000533827 ADGRL1O94910 1474 aa28.88■■■□□ 2.21
VPS51-213ENST00000533827 UBTFP17480 764 aaKnown RBP28.87■■■□□ 2.21
VPS51-213ENST00000533827 ARAP3Q8WWN8 1544 aa28.87■■■□□ 2.21
VPS51-213ENST00000533827 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
VPS51-213ENST00000533827 PHLDB1Q86UU1 1377 aa28.82■■■□□ 2.2
VPS51-213ENST00000533827 PLEKHD1A6NEE1 506 aa28.8■■■□□ 2.2
VPS51-213ENST00000533827 NEO1Q92859 1461 aa28.78■■■□□ 2.2
VPS51-213ENST00000533827 ARHGAP35Q9NRY4 1499 aa28.78■■■□□ 2.2
VPS51-213ENST00000533827 FMN1Q68DA7 1419 aa28.73■■■□□ 2.19
VPS51-213ENST00000533827 CDK13Q14004 1512 aaKnown RBP28.72■■■□□ 2.19
VPS51-213ENST00000533827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.7■■■□□ 2.19
VPS51-213ENST00000533827 RAPGEF3O95398 923 aa28.67■■■□□ 2.18
VPS51-213ENST00000533827 HECW1Q76N89 1606 aa28.67■■■□□ 2.18
VPS51-213ENST00000533827 FRMPD1Q5SYB0 1578 aa28.65■■■□□ 2.18
VPS51-213ENST00000533827 TTC37Q6PGP7 1564 aa28.65■■■□□ 2.18
VPS51-213ENST00000533827 CFAP74Q9C0B2 1584 aa28.61■■■□□ 2.17
VPS51-213ENST00000533827 FANCAO15360 1455 aa28.6■■■□□ 2.17
VPS51-213ENST00000533827 ATP1B4Q9UN42 357 aaPredicted RBP28.6■■■□□ 2.17
VPS51-213ENST00000533827 AKNAQ7Z591 1439 aa28.6■■■□□ 2.17
VPS51-213ENST00000533827 DENND4BO75064 1496 aaPredicted RBP28.56■■■□□ 2.16
VPS51-213ENST00000533827 RICTORQ6R327 1708 aa28.56■■■□□ 2.16
VPS51-213ENST00000533827 LRRIQ1Q96JM4 1722 aa28.53■■■□□ 2.16
VPS51-213ENST00000533827 PLCH2O75038 1416 aa28.52■■■□□ 2.16
VPS51-213ENST00000533827 CDK11AQ9UQ88 783 aaPredicted RBP28.52■■■□□ 2.16
VPS51-213ENST00000533827 KIF14Q15058 1648 aa28.47■■■□□ 2.15
VPS51-213ENST00000533827 TROQ12816 1431 aaPredicted RBP28.47■■■□□ 2.15
VPS51-213ENST00000533827 ADAMTSL3P82987 1691 aa28.47■■■□□ 2.15
VPS51-213ENST00000533827 ARHGEF40Q8TER5 1519 aa28.47■■■□□ 2.15
VPS51-213ENST00000533827 MYO5CQ9NQX4 1742 aa28.46■■■□□ 2.15
VPS51-213ENST00000533827 CASKIN1Q8WXD9 1431 aa28.45■■■□□ 2.15
VPS51-213ENST00000533827 ZMYM4Q5VZL5 1548 aa28.45■■■□□ 2.15
VPS51-213ENST00000533827 PCF11O94913 1555 aaKnown RBP28.44■■■□□ 2.14
VPS51-213ENST00000533827 HECW2Q9P2P5 1572 aa28.42■■■□□ 2.14
VPS51-213ENST00000533827 BCORL1Q5H9F3 1711 aa28.42■■■□□ 2.14
VPS51-213ENST00000533827 CLIP1P30622 1438 aa28.41■■■□□ 2.14
VPS51-213ENST00000533827 SCAPERQ9BY12 1400 aa28.41■■■□□ 2.14
VPS51-213ENST00000533827 EFCAB2Q5VUJ9 269 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms