RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 URB2Q14146 1524 aaKnown RBP23.26■■□□□ 1.31
ATP2C1-224ENST00000533801 DNMBPQ6XZF7 1577 aa23.25■■□□□ 1.31
ATP2C1-224ENST00000533801 CENPBP07199 599 aaPredicted RBP23.24■■□□□ 1.31
ATP2C1-224ENST00000533801 DHX57Q6P158 1386 aaKnown RBP23.24■■□□□ 1.31
ATP2C1-224ENST00000533801 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
ATP2C1-224ENST00000533801 PHLDB1Q86UU1 1377 aa23.21■■□□□ 1.31
ATP2C1-224ENST00000533801 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
ATP2C1-224ENST00000533801 MTUS2Q5JR59 1369 aa23.19■■□□□ 1.3
ATP2C1-224ENST00000533801 CHIC2Q9UKJ5 165 aa23.18■■□□□ 1.3
ATP2C1-224ENST00000533801 ACIN1Q9UKV3 1341 aaKnown RBP23.18■■□□□ 1.3
ATP2C1-224ENST00000533801 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.32e-7■■■■■ 33.1
ATP2C1-224ENST00000533801 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
ATP2C1-224ENST00000533801 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
ATP2C1-224ENST00000533801 RAB3GAP2Q9H2M9 1393 aa23.17■■□□□ 1.3
ATP2C1-224ENST00000533801 HIRIP3Q9BW71 556 aaPredicted RBP23.17■■□□□ 1.3
ATP2C1-224ENST00000533801 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
ATP2C1-224ENST00000533801 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.3
ATP2C1-224ENST00000533801 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
ATP2C1-224ENST00000533801 LRRC9Q6ZRR7 1453 aa23.1■■□□□ 1.29
ATP2C1-224ENST00000533801 PCF11O94913 1555 aaKnown RBP23.07■■□□□ 1.28
ATP2C1-224ENST00000533801 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
ATP2C1-224ENST00000533801 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
ATP2C1-224ENST00000533801 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
ATP2C1-224ENST00000533801 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
ATP2C1-224ENST00000533801 TRIM52Q96A61 297 aa23.01■■□□□ 1.27
ATP2C1-224ENST00000533801 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
ATP2C1-224ENST00000533801 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
ATP2C1-224ENST00000533801 FMN1Q68DA7 1419 aa22.96■■□□□ 1.27
ATP2C1-224ENST00000533801 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
ATP2C1-224ENST00000533801 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
ATP2C1-224ENST00000533801 ZNF777Q9ULD5 760 aaPredicted RBP22.91■■□□□ 1.26
ATP2C1-224ENST00000533801 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
ATP2C1-224ENST00000533801 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
ATP2C1-224ENST00000533801 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.26
ATP2C1-224ENST00000533801 CUL7Q14999 1698 aa22.87■■□□□ 1.25
ATP2C1-224ENST00000533801 FYCO1Q9BQS8 1478 aa22.86■■□□□ 1.25
ATP2C1-224ENST00000533801 FOXD1Q16676 465 aa22.82■■□□□ 1.24
ATP2C1-224ENST00000533801 MRC2Q9UBG0 1479 aa22.82■■□□□ 1.24
ATP2C1-224ENST00000533801 FGD6Q6ZV73 1430 aa22.81■■□□□ 1.24
ATP2C1-224ENST00000533801 EFCAB5A4FU69 1503 aa22.81■■□□□ 1.24
ATP2C1-224ENST00000533801 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
ATP2C1-224ENST00000533801 KCNH8Q96L42 1107 aa22.77■■□□□ 1.24
ATP2C1-224ENST00000533801 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
ATP2C1-224ENST00000533801 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
ATP2C1-224ENST00000533801 CNGB1Q14028 1251 aaPredicted RBP22.76■■□□□ 1.23
ATP2C1-224ENST00000533801 NCOA2Q15596 1464 aa22.76■■□□□ 1.23
ATP2C1-224ENST00000533801 ZNF644Q9H582 1327 aaPredicted RBP22.74■■□□□ 1.23
ATP2C1-224ENST00000533801 CDK13Q14004 1512 aaKnown RBP22.73■■□□□ 1.23
ATP2C1-224ENST00000533801 GRIN2BQ13224 1484 aa22.72■■□□□ 1.23
ATP2C1-224ENST00000533801 SNAPC4Q5SXM2 1469 aa22.72■■□□□ 1.23
ATP2C1-224ENST00000533801 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
ATP2C1-224ENST00000533801 PTPRKQ15262 1439 aa22.71■■□□□ 1.23
ATP2C1-224ENST00000533801 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
ATP2C1-224ENST00000533801 MAPKBP1O60336 1514 aa22.69■■□□□ 1.22
ATP2C1-224ENST00000533801 CFAP43Q8NDM7 1665 aa22.68■■□□□ 1.22
ATP2C1-224ENST00000533801 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
ATP2C1-224ENST00000533801 MYOM3Q5VTT5 1437 aa22.67■■□□□ 1.22
ATP2C1-224ENST00000533801 CCDC18Q5T9S5 1454 aa22.66■■□□□ 1.22
ATP2C1-224ENST00000533801 ZNF326Q5BKZ1 582 aaKnown RBP22.64■■□□□ 1.22
ATP2C1-224ENST00000533801 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
ATP2C1-224ENST00000533801 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
ATP2C1-224ENST00000533801 POLR3GLQ9BT43 218 aa22.62■■□□□ 1.21
ATP2C1-224ENST00000533801 PPP1R15AO75807 674 aaPredicted RBP22.61■■□□□ 1.21
ATP2C1-224ENST00000533801 JPH4Q96JJ6 628 aa22.61■■□□□ 1.21
ATP2C1-224ENST00000533801 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
ATP2C1-224ENST00000533801 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
ATP2C1-224ENST00000533801 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
ATP2C1-224ENST00000533801 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
ATP2C1-224ENST00000533801 EPRSP07814 1512 aaKnown RBP22.57■■□□□ 1.2
ATP2C1-224ENST00000533801 SAMD9Q5K651 1589 aa22.55■■□□□ 1.2
ATP2C1-224ENST00000533801 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
ATP2C1-224ENST00000533801 SLC4A1APQ9BWU0 796 aaKnown RBP22.54■■□□□ 1.2
ATP2C1-224ENST00000533801 NAIPQ13075 1403 aa22.52■■□□□ 1.2
ATP2C1-224ENST00000533801 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
ATP2C1-224ENST00000533801 MPHOSPH9Q99550 1183 aa22.51■■□□□ 1.19
ATP2C1-224ENST00000533801 SUPT6HQ7KZ85 1726 aaKnown RBP22.51■■□□□ 1.19
ATP2C1-224ENST00000533801 EHBP1L1Q8N3D4 1523 aa22.5■■□□□ 1.19
ATP2C1-224ENST00000533801 LRRIQ1Q96JM4 1722 aa22.5■■□□□ 1.19
ATP2C1-224ENST00000533801 PRG4Q92954 1404 aaPredicted RBP22.5■■□□□ 1.19
ATP2C1-224ENST00000533801 BCANQ96GW7 911 aa22.49■■□□□ 1.19
ATP2C1-224ENST00000533801 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
ATP2C1-224ENST00000533801 PLB1Q6P1J6 1458 aa22.48■■□□□ 1.19
ATP2C1-224ENST00000533801 ANP32CO43423 234 aa22.48■■□□□ 1.19
ATP2C1-224ENST00000533801 HFM1A2PYH4 1435 aa22.48■■□□□ 1.19
ATP2C1-224ENST00000533801 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
ATP2C1-224ENST00000533801 PTPN23Q9H3S7 1636 aa22.47■■□□□ 1.19
ATP2C1-224ENST00000533801 UACAQ9BZF9 1416 aa22.45■■□□□ 1.18
ATP2C1-224ENST00000533801 HECW1Q76N89 1606 aa22.45■■□□□ 1.18
ATP2C1-224ENST00000533801 KIAA0586Q9BVV6 1533 aa22.45■■□□□ 1.18
ATP2C1-224ENST00000533801 EIF4G3O43432 1585 aaKnown RBP22.44■■□□□ 1.18
ATP2C1-224ENST00000533801 L3MBTL2Q969R5 705 aa22.42■■□□□ 1.18
ATP2C1-224ENST00000533801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.41■■□□□ 1.18
ATP2C1-224ENST00000533801 UGGT2Q9NYU1 1516 aa22.4■■□□□ 1.18
ATP2C1-224ENST00000533801 WDR62O43379 1518 aa22.4■■□□□ 1.18
ATP2C1-224ENST00000533801 DISP1Q96F81 1524 aa22.39■■□□□ 1.17
ATP2C1-224ENST00000533801 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
ATP2C1-224ENST00000533801 CARMIL2Q6F5E8 1435 aa22.37■■□□□ 1.17
ATP2C1-224ENST00000533801 NUP153P49790 1475 aaKnown RBP22.37■■□□□ 1.17
ATP2C1-224ENST00000533801 HNRNPMP52272 730 aaKnown RBP eCLIP22.36■■□□□ 1.175e-7■■■■■ 28.1
ATP2C1-224ENST00000533801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms