RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
TRAPPC4-212ENST00000533058 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.11
TRAPPC4-212ENST00000533058 PRG4Q92954 1404 aaPredicted RBP21.95■■□□□ 1.1
TRAPPC4-212ENST00000533058 RAPGEF2Q9Y4G8 1499 aa21.87■■□□□ 1.09
TRAPPC4-212ENST00000533058 TRHP20396 242 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC4-212ENST00000533058 PRXQ9BXM0 1461 aa21.77■■□□□ 1.07
TRAPPC4-212ENST00000533058 IQGAP2Q13576 1575 aa21.75■■□□□ 1.07
TRAPPC4-212ENST00000533058 CARMIL2Q6F5E8 1435 aa21.73■■□□□ 1.07
TRAPPC4-212ENST00000533058 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
TRAPPC4-212ENST00000533058 EEA1Q15075 1411 aa21.71■■□□□ 1.07
TRAPPC4-212ENST00000533058 TNIKQ9UKE5 1360 aa21.69■■□□□ 1.06
TRAPPC4-212ENST00000533058 PTPRGP23470 1445 aa21.68■■□□□ 1.06
TRAPPC4-212ENST00000533058 UGGT2Q9NYU1 1516 aa21.68■■□□□ 1.06
TRAPPC4-212ENST00000533058 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
TRAPPC4-212ENST00000533058 DISP1Q96F81 1524 aa21.65■■□□□ 1.06
TRAPPC4-212ENST00000533058 NPM1P06748 294 aaKnown RBP eCLIP21.63■■□□□ 1.05
TRAPPC4-212ENST00000533058 ADCY10Q96PN6 1610 aa21.59■■□□□ 1.05
TRAPPC4-212ENST00000533058 MAPKBP1O60336 1514 aa21.56■■□□□ 1.04
TRAPPC4-212ENST00000533058 CTTNBP2Q8WZ74 1663 aa21.56■■□□□ 1.04
TRAPPC4-212ENST00000533058 UHRF1BP1LA0JNW5 1464 aa21.55■■□□□ 1.04
TRAPPC4-212ENST00000533058 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
TRAPPC4-212ENST00000533058 KIAA0556O60303 1618 aa21.55■■□□□ 1.04
TRAPPC4-212ENST00000533058 UACAQ9BZF9 1416 aa21.53■■□□□ 1.04
TRAPPC4-212ENST00000533058 ABCC2Q92887 1545 aa21.51■■□□□ 1.03
TRAPPC4-212ENST00000533058 ABCC10Q5T3U5 1492 aa21.5■■□□□ 1.03
TRAPPC4-212ENST00000533058 TTBK1Q5TCY1 1321 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC4-212ENST00000533058 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC4-212ENST00000533058 FAM69CQ0P6D2 419 aa21.44■■□□□ 1.02
TRAPPC4-212ENST00000533058 KDM5BQ9UGL1 1544 aa21.43■■□□□ 1.02
TRAPPC4-212ENST00000533058 KIF21BO75037 1637 aa21.42■■□□□ 1.02
TRAPPC4-212ENST00000533058 KIF13AQ9H1H9 1805 aa21.41■■□□□ 1.02
TRAPPC4-212ENST00000533058 PLB1Q6P1J6 1458 aa21.4■■□□□ 1.02
TRAPPC4-212ENST00000533058 DIP2BQ9P265 1576 aa21.39■■□□□ 1.01
TRAPPC4-212ENST00000533058 ASXL2Q76L83 1435 aa21.38■■□□□ 1.01
TRAPPC4-212ENST00000533058 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
TRAPPC4-212ENST00000533058 ABCA8O94911 1581 aa21.35■■□□□ 1.01
TRAPPC4-212ENST00000533058 P3H3Q8IVL6 736 aa21.31■■□□□ 1
TRAPPC4-212ENST00000533058 GLI2P10070 1586 aa21.3■■□□□ 1
TRAPPC4-212ENST00000533058 ZCCHC11Q5TAX3 1644 aaKnown RBP21.29■■□□□ 1
TRAPPC4-212ENST00000533058 EPRSP07814 1512 aaKnown RBP21.25■□□□□ 0.99
TRAPPC4-212ENST00000533058 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
TRAPPC4-212ENST00000533058 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
TRAPPC4-212ENST00000533058 WDR7Q9Y4E6 1490 aa21.24■□□□□ 0.99
TRAPPC4-212ENST00000533058 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC4-212ENST00000533058 FHOD3Q2V2M9 1422 aa21.2■□□□□ 0.98
TRAPPC4-212ENST00000533058 ATP10BO94823 1461 aa21.2■□□□□ 0.98
TRAPPC4-212ENST00000533058 RAPGEF6Q8TEU7 1601 aa21.16■□□□□ 0.98
TRAPPC4-212ENST00000533058 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
TRAPPC4-212ENST00000533058 MAP3K4Q9Y6R4 1608 aa21.13■□□□□ 0.97
TRAPPC4-212ENST00000533058 NUP153P49790 1475 aaKnown RBP21.13■□□□□ 0.97
TRAPPC4-212ENST00000533058 TSPOAP1O95153 1857 aa21.11■□□□□ 0.97
TRAPPC4-212ENST00000533058 PPRC1Q5VV67 1664 aaKnown RBP21.1■□□□□ 0.97
TRAPPC4-212ENST00000533058 TEX14Q8IWB6 1497 aa21.1■□□□□ 0.97
TRAPPC4-212ENST00000533058 ARHGAP35Q9NRY4 1499 aa21.1■□□□□ 0.97
TRAPPC4-212ENST00000533058 KCNH8Q96L42 1107 aa21.1■□□□□ 0.97
TRAPPC4-212ENST00000533058 KDM6BO15054 1643 aa21.08■□□□□ 0.97
TRAPPC4-212ENST00000533058 ARID3CA6NKF2 412 aa21.08■□□□□ 0.97
TRAPPC4-212ENST00000533058 FMN1Q68DA7 1419 aa21.08■□□□□ 0.97
TRAPPC4-212ENST00000533058 CD109Q6YHK3 1445 aa21.07■□□□□ 0.96
TRAPPC4-212ENST00000533058 MAGI3Q5TCQ9 1506 aa21.07■□□□□ 0.96
TRAPPC4-212ENST00000533058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC4-212ENST00000533058 HNRNPUL2Q1KMD3 747 aaKnown RBP21.05■□□□□ 0.96
TRAPPC4-212ENST00000533058 CFAP43Q8NDM7 1665 aa21.04■□□□□ 0.96
TRAPPC4-212ENST00000533058 PLEKHD1A6NEE1 506 aa21.02■□□□□ 0.96
TRAPPC4-212ENST00000533058 COL17A1Q9UMD9 1497 aaPredicted RBP21■□□□□ 0.95
TRAPPC4-212ENST00000533058 ABCA9Q8IUA7 1624 aa20.97■□□□□ 0.95
TRAPPC4-212ENST00000533058 PHLDB1Q86UU1 1377 aa20.96■□□□□ 0.95
TRAPPC4-212ENST00000533058 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
TRAPPC4-212ENST00000533058 CLIP1P30622 1438 aa20.91■□□□□ 0.94
TRAPPC4-212ENST00000533058 CDK11AQ9UQ88 783 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC4-212ENST00000533058 ARAP3Q8WWN8 1544 aa20.9■□□□□ 0.94
TRAPPC4-212ENST00000533058 CDK13Q14004 1512 aaKnown RBP20.89■□□□□ 0.94
TRAPPC4-212ENST00000533058 NEO1Q92859 1461 aa20.88■□□□□ 0.93
TRAPPC4-212ENST00000533058 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
TRAPPC4-212ENST00000533058 ATP1B4Q9UN42 357 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC4-212ENST00000533058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRAPPC4-212ENST00000533058 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC4-212ENST00000533058 LOC105371045A0A1W2PR82 267 aa20.81■□□□□ 0.92
TRAPPC4-212ENST00000533058 CCDC18Q5T9S5 1454 aa20.81■□□□□ 0.92
TRAPPC4-212ENST00000533058 TROQ12816 1431 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC4-212ENST00000533058 FYCO1Q9BQS8 1478 aa20.8■□□□□ 0.92
TRAPPC4-212ENST00000533058 PCF11O94913 1555 aaKnown RBP20.78■□□□□ 0.92
TRAPPC4-212ENST00000533058 PLCH2O75038 1416 aa20.78■□□□□ 0.92
TRAPPC4-212ENST00000533058 TTC37Q6PGP7 1564 aa20.76■□□□□ 0.91
TRAPPC4-212ENST00000533058 FANCAO15360 1455 aa20.76■□□□□ 0.91
TRAPPC4-212ENST00000533058 KDM4FA0A1W2PPD8 638 aa20.76■□□□□ 0.91
TRAPPC4-212ENST00000533058 AKNAQ7Z591 1439 aa20.76■□□□□ 0.91
TRAPPC4-212ENST00000533058 CEP162Q5TB80 1403 aa20.75■□□□□ 0.91
TRAPPC4-212ENST00000533058 LRRIQ1Q96JM4 1722 aa20.73■□□□□ 0.91
TRAPPC4-212ENST00000533058 RAPGEF3O95398 923 aa20.73■□□□□ 0.91
TRAPPC4-212ENST00000533058 CFAP74Q9C0B2 1584 aa20.72■□□□□ 0.91
TRAPPC4-212ENST00000533058 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC4-212ENST00000533058 KIF14Q15058 1648 aa20.71■□□□□ 0.91
TRAPPC4-212ENST00000533058 EFCAB2Q5VUJ9 269 aa20.7■□□□□ 0.9
TRAPPC4-212ENST00000533058 FRMPD1Q5SYB0 1578 aa20.65■□□□□ 0.9
TRAPPC4-212ENST00000533058 ADGRL1O94910 1474 aa20.65■□□□□ 0.9
TRAPPC4-212ENST00000533058 SCAPERQ9BY12 1400 aa20.63■□□□□ 0.89
TRAPPC4-212ENST00000533058 MYO5CQ9NQX4 1742 aa20.63■□□□□ 0.89
TRAPPC4-212ENST00000533058 MAGI2Q86UL8 1455 aa20.61■□□□□ 0.89
TRAPPC4-212ENST00000533058 RICTORQ6R327 1708 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms