RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 KIF27Q86VH2 1401 aa22.02■■□□□ 1.12
SDHD-213ENST00000532699 KIF13AQ9H1H9 1805 aa22.01■■□□□ 1.11
SDHD-213ENST00000532699 JPH4Q96JJ6 628 aa22.01■■□□□ 1.11
SDHD-213ENST00000532699 KIAA0586Q9BVV6 1533 aa21.94■■□□□ 1.1
SDHD-213ENST00000532699 ADCY10Q96PN6 1610 aa21.91■■□□□ 1.1
SDHD-213ENST00000532699 CARMIL1Q5VZK9 1371 aa21.88■■□□□ 1.09
SDHD-213ENST00000532699 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
SDHD-213ENST00000532699 MAPKBP1O60336 1514 aa21.78■■□□□ 1.08
SDHD-213ENST00000532699 DIP2BQ9P265 1576 aa21.76■■□□□ 1.07
SDHD-213ENST00000532699 ABCC10Q5T3U5 1492 aa21.73■■□□□ 1.07
SDHD-213ENST00000532699 DISP1Q96F81 1524 aa21.73■■□□□ 1.07
SDHD-213ENST00000532699 RAPGEF2Q9Y4G8 1499 aa21.71■■□□□ 1.07
SDHD-213ENST00000532699 CTTNBP2Q8WZ74 1663 aa21.69■■□□□ 1.06
SDHD-213ENST00000532699 TSPOAP1O95153 1857 aa21.68■■□□□ 1.06
SDHD-213ENST00000532699 UGGT2Q9NYU1 1516 aa21.67■■□□□ 1.06
SDHD-213ENST00000532699 PTPRGP23470 1445 aa21.66■■□□□ 1.06
SDHD-213ENST00000532699 TNIKQ9UKE5 1360 aa21.65■■□□□ 1.06
SDHD-213ENST00000532699 KIAA0556O60303 1618 aa21.63■■□□□ 1.05
SDHD-213ENST00000532699 FAM69CQ0P6D2 419 aa21.62■■□□□ 1.05
SDHD-213ENST00000532699 CARMIL2Q6F5E8 1435 aa21.62■■□□□ 1.05
SDHD-213ENST00000532699 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
SDHD-213ENST00000532699 PPRC1Q5VV67 1664 aaKnown RBP21.6■■□□□ 1.05
SDHD-213ENST00000532699 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
SDHD-213ENST00000532699 UHRF1BP1LA0JNW5 1464 aa21.58■■□□□ 1.05
SDHD-213ENST00000532699 PRXQ9BXM0 1461 aa21.58■■□□□ 1.05
SDHD-213ENST00000532699 NPM1P06748 294 aaKnown RBP eCLIP21.58■■□□□ 1.05
SDHD-213ENST00000532699 ZCCHC11Q5TAX3 1644 aaKnown RBP21.54■■□□□ 1.04
SDHD-213ENST00000532699 UACAQ9BZF9 1416 aa21.54■■□□□ 1.04
SDHD-213ENST00000532699 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
SDHD-213ENST00000532699 ASXL2Q76L83 1435 aa21.51■■□□□ 1.03
SDHD-213ENST00000532699 GLI2P10070 1586 aa21.5■■□□□ 1.03
SDHD-213ENST00000532699 KDM6BO15054 1643 aa21.47■■□□□ 1.03
SDHD-213ENST00000532699 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.03
SDHD-213ENST00000532699 ABCA8O94911 1581 aa21.44■■□□□ 1.02
SDHD-213ENST00000532699 MAP3K4Q9Y6R4 1608 aa21.44■■□□□ 1.02
SDHD-213ENST00000532699 EPRSP07814 1512 aaKnown RBP21.41■■□□□ 1.02
SDHD-213ENST00000532699 GOLGA3Q08378 1498 aa21.38■■□□□ 1.01
SDHD-213ENST00000532699 SAMD9Q5K651 1589 aa21.35■■□□□ 1.01
SDHD-213ENST00000532699 COL17A1Q9UMD9 1497 aaPredicted RBP21.34■■□□□ 1.01
SDHD-213ENST00000532699 AEBP2Q6ZN18 517 aaPredicted RBP21.33■■□□□ 1.01
SDHD-213ENST00000532699 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
SDHD-213ENST00000532699 WDR7Q9Y4E6 1490 aa21.31■■□□□ 1
SDHD-213ENST00000532699 CFAP43Q8NDM7 1665 aa21.26■□□□□ 0.99
SDHD-213ENST00000532699 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
SDHD-213ENST00000532699 KDM4FA0A1W2PPD8 638 aa21.23■□□□□ 0.99
SDHD-213ENST00000532699 EEA1Q15075 1411 aa21.22■□□□□ 0.99
SDHD-213ENST00000532699 ATP10BO94823 1461 aa21.21■□□□□ 0.99
SDHD-213ENST00000532699 KIF21BO75037 1637 aa21.21■□□□□ 0.99
SDHD-213ENST00000532699 RAPGEF6Q8TEU7 1601 aa21.21■□□□□ 0.99
SDHD-213ENST00000532699 TEX14Q8IWB6 1497 aa21.18■□□□□ 0.98
SDHD-213ENST00000532699 MAGI3Q5TCQ9 1506 aa21.17■□□□□ 0.98
SDHD-213ENST00000532699 FAM9AQ8IZU1 332 aaPredicted RBP21.16■□□□□ 0.98
SDHD-213ENST00000532699 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
SDHD-213ENST00000532699 CD109Q6YHK3 1445 aa21.14■□□□□ 0.98
SDHD-213ENST00000532699 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
SDHD-213ENST00000532699 ABCA9Q8IUA7 1624 aa21.13■□□□□ 0.97
SDHD-213ENST00000532699 NUP153P49790 1475 aaKnown RBP21.13■□□□□ 0.97
SDHD-213ENST00000532699 FHOD3Q2V2M9 1422 aa21.12■□□□□ 0.97
SDHD-213ENST00000532699 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
SDHD-213ENST00000532699 ADGRL1O94910 1474 aa21.07■□□□□ 0.96
SDHD-213ENST00000532699 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
SDHD-213ENST00000532699 EFCAB5A4FU69 1503 aa21.04■□□□□ 0.96
SDHD-213ENST00000532699 ARAP3Q8WWN8 1544 aa21.01■□□□□ 0.95
SDHD-213ENST00000532699 FRMPD1Q5SYB0 1578 aa20.98■□□□□ 0.95
SDHD-213ENST00000532699 LRRIQ1Q96JM4 1722 aa20.98■□□□□ 0.95
SDHD-213ENST00000532699 ARHGAP35Q9NRY4 1499 aa20.94■□□□□ 0.94
SDHD-213ENST00000532699 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
SDHD-213ENST00000532699 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
SDHD-213ENST00000532699 TTC37Q6PGP7 1564 aa20.93■□□□□ 0.94
SDHD-213ENST00000532699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.93■□□□□ 0.945e-8■■■■■ 28.6
SDHD-213ENST00000532699 RICTORQ6R327 1708 aa20.91■□□□□ 0.94
SDHD-213ENST00000532699 NEO1Q92859 1461 aa20.89■□□□□ 0.94
SDHD-213ENST00000532699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
SDHD-213ENST00000532699 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
SDHD-213ENST00000532699 RAPGEF3O95398 923 aa20.85■□□□□ 0.93
SDHD-213ENST00000532699 PHLDB1Q86UU1 1377 aa20.85■□□□□ 0.93
SDHD-213ENST00000532699 UBTFP17480 764 aaKnown RBP20.84■□□□□ 0.93
SDHD-213ENST00000532699 SIGLEC1Q9BZZ2 1709 aa20.84■□□□□ 0.93
SDHD-213ENST00000532699 ADAMTSL3P82987 1691 aa20.83■□□□□ 0.93
SDHD-213ENST00000532699 HECW1Q76N89 1606 aa20.83■□□□□ 0.93
SDHD-213ENST00000532699 KIF14Q15058 1648 aa20.82■□□□□ 0.92
SDHD-213ENST00000532699 PLEKHD1A6NEE1 506 aa20.81■□□□□ 0.92
SDHD-213ENST00000532699 CFAP74Q9C0B2 1584 aa20.8■□□□□ 0.92
SDHD-213ENST00000532699 HECW2Q9P2P5 1572 aa20.79■□□□□ 0.92
SDHD-213ENST00000532699 BCORL1Q5H9F3 1711 aa20.78■□□□□ 0.92
SDHD-213ENST00000532699 FANCAO15360 1455 aa20.78■□□□□ 0.92
SDHD-213ENST00000532699 MYO5CQ9NQX4 1742 aa20.78■□□□□ 0.92
SDHD-213ENST00000532699 FMN1Q68DA7 1419 aa20.78■□□□□ 0.92
SDHD-213ENST00000532699 AKNAQ7Z591 1439 aa20.78■□□□□ 0.92
SDHD-213ENST00000532699 ARHGEF40Q8TER5 1519 aa20.77■□□□□ 0.92
SDHD-213ENST00000532699 PCF11O94913 1555 aaKnown RBP20.75■□□□□ 0.91
SDHD-213ENST00000532699 ZMYM4Q5VZL5 1548 aa20.74■□□□□ 0.91
SDHD-213ENST00000532699 DENND4BO75064 1496 aaPredicted RBP20.73■□□□□ 0.91
SDHD-213ENST00000532699 CDC42BPBQ9Y5S2 1711 aa20.72■□□□□ 0.91
SDHD-213ENST00000532699 MADDQ8WXG6 1647 aa20.71■□□□□ 0.91
SDHD-213ENST00000532699 PLCH2O75038 1416 aa20.71■□□□□ 0.91
SDHD-213ENST00000532699 YEATS2Q9ULM3 1422 aa20.68■□□□□ 0.9
SDHD-213ENST00000532699 TROQ12816 1431 aaPredicted RBP20.67■□□□□ 0.9
SDHD-213ENST00000532699 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
SDHD-213ENST00000532699 PTPRMP28827 1452 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms