RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 JPH4Q96JJ6 628 aa39.02■■■■□ 3.84
CAPN1-222ENST00000532285 KIAA0586Q9BVV6 1533 aa38.99■■■■□ 3.83
CAPN1-222ENST00000532285 PRG4Q92954 1404 aaPredicted RBP38.97■■■■□ 3.83
CAPN1-222ENST00000532285 RAPGEF2Q9Y4G8 1499 aa38.88■■■■□ 3.81
CAPN1-222ENST00000532285 IQGAP2Q13576 1575 aa38.74■■■■□ 3.79
CAPN1-222ENST00000532285 TRHP20396 242 aaPredicted RBP38.66■■■■□ 3.78
CAPN1-222ENST00000532285 PRXQ9BXM0 1461 aa38.66■■■■□ 3.78
CAPN1-222ENST00000532285 CARMIL2Q6F5E8 1435 aa38.6■■■■□ 3.77
CAPN1-222ENST00000532285 CTTNBP2Q8WZ74 1663 aa38.59■■■■□ 3.77
CAPN1-222ENST00000532285 EEA1Q15075 1411 aa38.57■■■■□ 3.77
CAPN1-222ENST00000532285 CSRNP3Q8WYN3 585 aa38.56■■■■□ 3.76
CAPN1-222ENST00000532285 CHIC1Q5VXU3 224 aa38.53■■■■□ 3.76
CAPN1-222ENST00000532285 UGGT2Q9NYU1 1516 aa38.51■■■■□ 3.76
CAPN1-222ENST00000532285 TNIKQ9UKE5 1360 aa38.47■■■■□ 3.75
CAPN1-222ENST00000532285 PTPRGP23470 1445 aa38.46■■■■□ 3.75
CAPN1-222ENST00000532285 DISP1Q96F81 1524 aa38.46■■■■□ 3.75
CAPN1-222ENST00000532285 ADCY10Q96PN6 1610 aa38.43■■■■□ 3.74
CAPN1-222ENST00000532285 NPM1P06748 294 aaKnown RBP eCLIP38.37■■■■□ 3.73
CAPN1-222ENST00000532285 KIAA0556O60303 1618 aa38.37■■■■□ 3.73
CAPN1-222ENST00000532285 TTBK1Q5TCY1 1321 aaPredicted RBP38.36■■■■□ 3.73
CAPN1-222ENST00000532285 FAM9AQ8IZU1 332 aaPredicted RBP38.34■■■■□ 3.73
CAPN1-222ENST00000532285 GOLGA3Q08378 1498 aa38.29■■■■□ 3.72
CAPN1-222ENST00000532285 MAPKBP1O60336 1514 aa38.24■■■■□ 3.71
CAPN1-222ENST00000532285 UACAQ9BZF9 1416 aa38.21■■■■□ 3.71
CAPN1-222ENST00000532285 KIF21BO75037 1637 aa38.2■■■■□ 3.71
CAPN1-222ENST00000532285 KIF13AQ9H1H9 1805 aa38.2■■■■□ 3.71
CAPN1-222ENST00000532285 UHRF1BP1LA0JNW5 1464 aa38.2■■■■□ 3.71
CAPN1-222ENST00000532285 ABCC2Q92887 1545 aa38.17■■■■□ 3.7
CAPN1-222ENST00000532285 ABCC10Q5T3U5 1492 aa38.09■■■■□ 3.69
CAPN1-222ENST00000532285 DIP2BQ9P265 1576 aa38.03■■■■□ 3.68
CAPN1-222ENST00000532285 SAMD9Q5K651 1589 aa38.02■■■■□ 3.68
CAPN1-222ENST00000532285 FAM69CQ0P6D2 419 aa38.02■■■■□ 3.68
CAPN1-222ENST00000532285 KDM5BQ9UGL1 1544 aa38.01■■■■□ 3.67
CAPN1-222ENST00000532285 PLB1Q6P1J6 1458 aa37.99■■■■□ 3.67
CAPN1-222ENST00000532285 ABCA8O94911 1581 aa37.97■■■■□ 3.67
CAPN1-222ENST00000532285 P3H3Q8IVL6 736 aa37.96■■■■□ 3.67
CAPN1-222ENST00000532285 ZCCHC11Q5TAX3 1644 aaKnown RBP37.96■■■■□ 3.67
CAPN1-222ENST00000532285 ASXL2Q76L83 1435 aa37.95■■■■□ 3.67
CAPN1-222ENST00000532285 RANGAP1P46060 587 aaPredicted RBP37.88■■■■□ 3.65
CAPN1-222ENST00000532285 UBTFP17480 764 aaKnown RBP37.86■■■■□ 3.65
CAPN1-222ENST00000532285 EHMT2Q96KQ7 1210 aa37.85■■■■□ 3.65
CAPN1-222ENST00000532285 EFCAB5A4FU69 1503 aa37.81■■■■□ 3.64
CAPN1-222ENST00000532285 TSPOAP1O95153 1857 aa37.79■■■■□ 3.64
CAPN1-222ENST00000532285 GLI2P10070 1586 aa37.79■■■■□ 3.64
CAPN1-222ENST00000532285 FHOD3Q2V2M9 1422 aa37.74■■■■□ 3.63
CAPN1-222ENST00000532285 RAPGEF6Q8TEU7 1601 aa37.73■■■■□ 3.63
CAPN1-222ENST00000532285 EPRSP07814 1512 aaKnown RBP37.72■■■■□ 3.63
CAPN1-222ENST00000532285 WDR7Q9Y4E6 1490 aa37.71■■■■□ 3.63
CAPN1-222ENST00000532285 ATP10BO94823 1461 aa37.64■■■■□ 3.62
CAPN1-222ENST00000532285 MAP3K4Q9Y6R4 1608 aa37.61■■■■□ 3.61
CAPN1-222ENST00000532285 PPRC1Q5VV67 1664 aaKnown RBP37.6■■■■□ 3.61
CAPN1-222ENST00000532285 ARID3CA6NKF2 412 aa37.59■■■■□ 3.61
CAPN1-222ENST00000532285 NUP153P49790 1475 aaKnown RBP37.55■■■■□ 3.6
CAPN1-222ENST00000532285 ARHGAP35Q9NRY4 1499 aa37.54■■■■□ 3.6
CAPN1-222ENST00000532285 KCNH8Q96L42 1107 aa37.53■■■■□ 3.6
CAPN1-222ENST00000532285 KDM6BO15054 1643 aa37.51■■■■□ 3.6
CAPN1-222ENST00000532285 CFAP43Q8NDM7 1665 aa37.49■■■■□ 3.59
CAPN1-222ENST00000532285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.47■■■■□ 3.59
CAPN1-222ENST00000532285 HNRNPUL2Q1KMD3 747 aaKnown RBP37.47■■■■□ 3.59
CAPN1-222ENST00000532285 FMN1Q68DA7 1419 aa37.45■■■■□ 3.59
CAPN1-222ENST00000532285 TEX14Q8IWB6 1497 aa37.45■■■■□ 3.59
CAPN1-222ENST00000532285 CD109Q6YHK3 1445 aa37.4■■■■□ 3.58
CAPN1-222ENST00000532285 MAGI3Q5TCQ9 1506 aa37.35■■■■□ 3.57
CAPN1-222ENST00000532285 HECW1Q76N89 1606 aa37.32■■■■□ 3.57
CAPN1-222ENST00000532285 ABCA9Q8IUA7 1624 aa37.32■■■■□ 3.57
CAPN1-222ENST00000532285 PLEKHD1A6NEE1 506 aa37.31■■■■□ 3.56
CAPN1-222ENST00000532285 ATP1B4Q9UN42 357 aaPredicted RBP37.26■■■■□ 3.56
CAPN1-222ENST00000532285 CDK13Q14004 1512 aaKnown RBP37.26■■■■□ 3.55
CAPN1-222ENST00000532285 CLIP1P30622 1438 aa37.23■■■■□ 3.55
CAPN1-222ENST00000532285 COL17A1Q9UMD9 1497 aaPredicted RBP37.2■■■■□ 3.55
CAPN1-222ENST00000532285 LRRIQ1Q96JM4 1722 aa37.14■■■■□ 3.54
CAPN1-222ENST00000532285 CASKIN1Q8WXD9 1431 aa37.12■■■■□ 3.53
CAPN1-222ENST00000532285 CDK11AQ9UQ88 783 aaPredicted RBP37.11■■■■□ 3.53
CAPN1-222ENST00000532285 PCF11O94913 1555 aaKnown RBP37.11■■■■□ 3.53
CAPN1-222ENST00000532285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.09■■■■□ 3.531e-9■■■■□ 24
CAPN1-222ENST00000532285 PHLDB1Q86UU1 1377 aa37.08■■■■□ 3.53
CAPN1-222ENST00000532285 ARAP3Q8WWN8 1544 aa37.05■■■■□ 3.52
CAPN1-222ENST00000532285 NEO1Q92859 1461 aa37.03■■■■□ 3.52
CAPN1-222ENST00000532285 FYCO1Q9BQS8 1478 aa37.03■■■■□ 3.52
CAPN1-222ENST00000532285 TTC37Q6PGP7 1564 aa37.03■■■■□ 3.52
CAPN1-222ENST00000532285 CCDC18Q5T9S5 1454 aa37.02■■■■□ 3.52
CAPN1-222ENST00000532285 CEP162Q5TB80 1403 aa37■■■■□ 3.51
CAPN1-222ENST00000532285 TROQ12816 1431 aaPredicted RBP36.96■■■■□ 3.51
CAPN1-222ENST00000532285 LOC105371045A0A1W2PR82 267 aa36.95■■■■□ 3.51
CAPN1-222ENST00000532285 CFAP74Q9C0B2 1584 aa36.95■■■■□ 3.51
CAPN1-222ENST00000532285 KIF14Q15058 1648 aa36.93■■■■□ 3.5
CAPN1-222ENST00000532285 AEBP2Q6ZN18 517 aaPredicted RBP36.93■■■■□ 3.5
CAPN1-222ENST00000532285 FANCAO15360 1455 aa36.9■■■■□ 3.5
CAPN1-222ENST00000532285 MYO5CQ9NQX4 1742 aa36.89■■■■□ 3.5
CAPN1-222ENST00000532285 PLCH2O75038 1416 aa36.86■■■■□ 3.49
CAPN1-222ENST00000532285 AKNAQ7Z591 1439 aa36.85■■■■□ 3.49
CAPN1-222ENST00000532285 RAPGEF3O95398 923 aa36.8■■■■□ 3.48
CAPN1-222ENST00000532285 FRMPD1Q5SYB0 1578 aa36.77■■■■□ 3.48
CAPN1-222ENST00000532285 DENND4BO75064 1496 aaPredicted RBP36.75■■■■□ 3.47
CAPN1-222ENST00000532285 RICTORQ6R327 1708 aa36.75■■■■□ 3.47
CAPN1-222ENST00000532285 KDM4FA0A1W2PPD8 638 aa36.74■■■■□ 3.47
CAPN1-222ENST00000532285 EFCAB2Q5VUJ9 269 aa36.73■■■■□ 3.47
CAPN1-222ENST00000532285 CDC42BPBQ9Y5S2 1711 aa36.69■■■■□ 3.46
CAPN1-222ENST00000532285 ADGRL1O94910 1474 aa36.69■■■■□ 3.46
CAPN1-222ENST00000532285 ARHGAP5Q13017 1502 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms