RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 IGF1RP08069 1367 aa37.08■■■■□ 3.53
FDFT1-220ENST00000531733 AEBP2Q6ZN18 517 aaPredicted RBP37■■■■□ 3.51
FDFT1-220ENST00000531733 KIF27Q86VH2 1401 aa37■■■■□ 3.51
FDFT1-220ENST00000531733 KIAA0586Q9BVV6 1533 aa36.97■■■■□ 3.51
FDFT1-220ENST00000531733 CUL7Q14999 1698 aa36.95■■■■□ 3.51
FDFT1-220ENST00000531733 ADCY10Q96PN6 1610 aa36.94■■■■□ 3.5
FDFT1-220ENST00000531733 ABCC10Q5T3U5 1492 aa36.87■■■■□ 3.49
FDFT1-220ENST00000531733 MAPKBP1O60336 1514 aa36.85■■■■□ 3.49
FDFT1-220ENST00000531733 FAM69CQ0P6D2 419 aa36.85■■■■□ 3.49
FDFT1-220ENST00000531733 NPM1P06748 294 aaKnown RBP eCLIP36.82■■■■□ 3.48
FDFT1-220ENST00000531733 CARMIL1Q5VZK9 1371 aa36.79■■■■□ 3.48
FDFT1-220ENST00000531733 DIP2BQ9P265 1576 aa36.79■■■■□ 3.48
FDFT1-220ENST00000531733 PTPRGP23470 1445 aa36.67■■■■□ 3.46
FDFT1-220ENST00000531733 TTBK1Q5TCY1 1321 aaPredicted RBP36.66■■■■□ 3.46
FDFT1-220ENST00000531733 IQGAP2Q13576 1575 aa36.6■■■■□ 3.45
FDFT1-220ENST00000531733 TNIKQ9UKE5 1360 aa36.58■■■■□ 3.45
FDFT1-220ENST00000531733 TSPOAP1O95153 1857 aa36.56■■■■□ 3.44
FDFT1-220ENST00000531733 CARMIL2Q6F5E8 1435 aa36.55■■■■□ 3.44
FDFT1-220ENST00000531733 ABCC2Q92887 1545 aa36.5■■■■□ 3.43
FDFT1-220ENST00000531733 DISP1Q96F81 1524 aa36.5■■■■□ 3.43
FDFT1-220ENST00000531733 KDM6BO15054 1643 aa36.48■■■■□ 3.43
FDFT1-220ENST00000531733 RAPGEF2Q9Y4G8 1499 aa36.43■■■■□ 3.42
FDFT1-220ENST00000531733 ASXL2Q76L83 1435 aa36.42■■■■□ 3.42
FDFT1-220ENST00000531733 UHRF1BP1LA0JNW5 1464 aa36.4■■■■□ 3.42
FDFT1-220ENST00000531733 UACAQ9BZF9 1416 aa36.39■■■■□ 3.42
FDFT1-220ENST00000531733 UGGT2Q9NYU1 1516 aa36.37■■■■□ 3.41
FDFT1-220ENST00000531733 PLB1Q6P1J6 1458 aa36.34■■■■□ 3.41
FDFT1-220ENST00000531733 PPRC1Q5VV67 1664 aaKnown RBP36.33■■■■□ 3.41
FDFT1-220ENST00000531733 GLI2P10070 1586 aa36.31■■■■□ 3.4
FDFT1-220ENST00000531733 KIAA0556O60303 1618 aa36.3■■■■□ 3.4
FDFT1-220ENST00000531733 KDM4FA0A1W2PPD8 638 aa36.29■■■■□ 3.4
FDFT1-220ENST00000531733 KDM5BQ9UGL1 1544 aa36.26■■■■□ 3.4
FDFT1-220ENST00000531733 ZCCHC11Q5TAX3 1644 aaKnown RBP36.22■■■■□ 3.39
FDFT1-220ENST00000531733 EPRSP07814 1512 aaKnown RBP36.2■■■■□ 3.39
FDFT1-220ENST00000531733 CTTNBP2Q8WZ74 1663 aa36.15■■■■□ 3.38
FDFT1-220ENST00000531733 COL17A1Q9UMD9 1497 aaPredicted RBP36.13■■■■□ 3.37
FDFT1-220ENST00000531733 MAP3K4Q9Y6R4 1608 aa36.13■■■■□ 3.37
FDFT1-220ENST00000531733 PRXQ9BXM0 1461 aa36.05■■■■□ 3.36
FDFT1-220ENST00000531733 WDR7Q9Y4E6 1490 aa36.01■■■■□ 3.36
FDFT1-220ENST00000531733 ABCA8O94911 1581 aa35.98■■■■□ 3.35
FDFT1-220ENST00000531733 GOLGA3Q08378 1498 aa35.98■■■■□ 3.35
FDFT1-220ENST00000531733 TEX14Q8IWB6 1497 aa35.95■■■■□ 3.35
FDFT1-220ENST00000531733 ADGRL1O94910 1474 aa35.91■■■■□ 3.34
FDFT1-220ENST00000531733 KCNH8Q96L42 1107 aa35.85■■■■□ 3.33
FDFT1-220ENST00000531733 CD109Q6YHK3 1445 aa35.81■■■■□ 3.32
FDFT1-220ENST00000531733 P3H3Q8IVL6 736 aa35.8■■■■□ 3.32
FDFT1-220ENST00000531733 CFAP43Q8NDM7 1665 aa35.79■■■■□ 3.32
FDFT1-220ENST00000531733 MAGI3Q5TCQ9 1506 aa35.78■■■■□ 3.32
FDFT1-220ENST00000531733 ARID3CA6NKF2 412 aa35.77■■■■□ 3.32
FDFT1-220ENST00000531733 ATP10BO94823 1461 aa35.69■■■■□ 3.3
FDFT1-220ENST00000531733 CSRNP3Q8WYN3 585 aa35.69■■■■□ 3.3
FDFT1-220ENST00000531733 SAMD9Q5K651 1589 aa35.66■■■■□ 3.3
FDFT1-220ENST00000531733 RAPGEF6Q8TEU7 1601 aa35.54■■■■□ 3.28
FDFT1-220ENST00000531733 ABCA9Q8IUA7 1624 aa35.51■■■■□ 3.28
FDFT1-220ENST00000531733 ARAP3Q8WWN8 1544 aa35.51■■■■□ 3.27
FDFT1-220ENST00000531733 KIF21BO75037 1637 aa35.5■■■■□ 3.27
FDFT1-220ENST00000531733 RANGAP1P46060 587 aaPredicted RBP35.5■■■■□ 3.27
FDFT1-220ENST00000531733 FAM9AQ8IZU1 332 aaPredicted RBP35.49■■■■□ 3.27
FDFT1-220ENST00000531733 HECW2Q9P2P5 1572 aa35.48■■■■□ 3.27
FDFT1-220ENST00000531733 FHOD3Q2V2M9 1422 aa35.45■■■■□ 3.27
FDFT1-220ENST00000531733 NUP153P49790 1475 aaKnown RBP35.45■■■■□ 3.27
FDFT1-220ENST00000531733 EEA1Q15075 1411 aa35.42■■■■□ 3.26
FDFT1-220ENST00000531733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.4■■■■□ 3.26
FDFT1-220ENST00000531733 HNRNPUL2Q1KMD3 747 aaKnown RBP35.4■■■■□ 3.26
FDFT1-220ENST00000531733 RAPGEF3O95398 923 aa35.36■■■■□ 3.25
FDFT1-220ENST00000531733 ILDR1Q86SU0 546 aaPredicted RBP35.35■■■■□ 3.25
FDFT1-220ENST00000531733 PHLDB1Q86UU1 1377 aa35.32■■■■□ 3.24
FDFT1-220ENST00000531733 NEO1Q92859 1461 aa35.31■■■■□ 3.24
FDFT1-220ENST00000531733 FRMPD1Q5SYB0 1578 aa35.3■■■■□ 3.24
FDFT1-220ENST00000531733 ADAMTSL3P82987 1691 aa35.21■■■■□ 3.23
FDFT1-220ENST00000531733 EFCAB5A4FU69 1503 aa35.19■■■■□ 3.22
FDFT1-220ENST00000531733 PLEKHD1A6NEE1 506 aa35.18■■■■□ 3.22
FDFT1-220ENST00000531733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.16■■■■□ 3.228e-6■□□□□ 10.5
FDFT1-220ENST00000531733 PTPRMP28827 1452 aa35.14■■■■□ 3.22
FDFT1-220ENST00000531733 EHMT2Q96KQ7 1210 aa35.13■■■■□ 3.21
FDFT1-220ENST00000531733 TTC37Q6PGP7 1564 aa35.13■■■■□ 3.21
FDFT1-220ENST00000531733 CDK13Q14004 1512 aaKnown RBP35.11■■■■□ 3.21
FDFT1-220ENST00000531733 BCORL1Q5H9F3 1711 aa35.1■■■■□ 3.21
FDFT1-220ENST00000531733 AKNAQ7Z591 1439 aa35.1■■■■□ 3.21
FDFT1-220ENST00000531733 RICTORQ6R327 1708 aa35.09■■■■□ 3.21
FDFT1-220ENST00000531733 FANCAO15360 1455 aa35.08■■■■□ 3.21
FDFT1-220ENST00000531733 DENND4BO75064 1496 aaPredicted RBP35.08■■■■□ 3.21
FDFT1-220ENST00000531733 MADDQ8WXG6 1647 aa35.06■■■■□ 3.2
FDFT1-220ENST00000531733 ARHGEF40Q8TER5 1519 aa35.06■■■■□ 3.2
FDFT1-220ENST00000531733 ARID4BQ4LE39 1312 aaPredicted RBP35.05■■■■□ 3.2
FDFT1-220ENST00000531733 CFAP74Q9C0B2 1584 aa35■■■■□ 3.19
FDFT1-220ENST00000531733 UBTFP17480 764 aaKnown RBP34.97■■■■□ 3.19
FDFT1-220ENST00000531733 SIGLEC1Q9BZZ2 1709 aa34.96■■■■□ 3.19
FDFT1-220ENST00000531733 ARHGAP35Q9NRY4 1499 aa34.95■■■■□ 3.19
FDFT1-220ENST00000531733 YEATS2Q9ULM3 1422 aa34.94■■■■□ 3.18
FDFT1-220ENST00000531733 ZMYM4Q5VZL5 1548 aa34.94■■■■□ 3.18
FDFT1-220ENST00000531733 CHIC1Q5VXU3 224 aa34.92■■■■□ 3.18
FDFT1-220ENST00000531733 RIMS1Q86UR5 1692 aaKnown RBP34.91■■■■□ 3.18
FDFT1-220ENST00000531733 ATP1B4Q9UN42 357 aaPredicted RBP34.9■■■■□ 3.18
FDFT1-220ENST00000531733 PLCH2O75038 1416 aa34.89■■■■□ 3.18
FDFT1-220ENST00000531733 ZFYVE16Q7Z3T8 1539 aa34.88■■■■□ 3.17
FDFT1-220ENST00000531733 HECW1Q76N89 1606 aa34.88■■■■□ 3.17
FDFT1-220ENST00000531733 FMN1Q68DA7 1419 aa34.87■■■■□ 3.17
FDFT1-220ENST00000531733 SCAPERQ9BY12 1400 aa34.85■■■■□ 3.17
FDFT1-220ENST00000531733 LMTK3Q96Q04 1460 aa34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms