RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 KIF13AQ9H1H9 1805 aa26.34■■□□□ 1.81
CAPN1-219ENST00000530495 IGF1RP08069 1367 aa26.32■■□□□ 1.8
CAPN1-219ENST00000530495 KIF27Q86VH2 1401 aa26.27■■□□□ 1.8
CAPN1-219ENST00000530495 KIAA0586Q9BVV6 1533 aa26.26■■□□□ 1.79
CAPN1-219ENST00000530495 NPM1P06748 294 aaKnown RBP eCLIP26.25■■□□□ 1.79
CAPN1-219ENST00000530495 CUL7Q14999 1698 aa26.23■■□□□ 1.79
CAPN1-219ENST00000530495 ABCC10Q5T3U5 1492 aa26.2■■□□□ 1.78
CAPN1-219ENST00000530495 MAPKBP1O60336 1514 aa26.19■■□□□ 1.78
CAPN1-219ENST00000530495 FAM69CQ0P6D2 419 aa26.19■■□□□ 1.78
CAPN1-219ENST00000530495 ADCY10Q96PN6 1610 aa26.18■■□□□ 1.78
CAPN1-219ENST00000530495 CARMIL1Q5VZK9 1371 aa26.11■■□□□ 1.77
CAPN1-219ENST00000530495 DIP2BQ9P265 1576 aa26.1■■□□□ 1.77
CAPN1-219ENST00000530495 PTPRGP23470 1445 aa26.05■■□□□ 1.76
CAPN1-219ENST00000530495 CARMIL2Q6F5E8 1435 aa26■■□□□ 1.75
CAPN1-219ENST00000530495 TNIKQ9UKE5 1360 aa25.98■■□□□ 1.75
CAPN1-219ENST00000530495 IQGAP2Q13576 1575 aa25.95■■□□□ 1.75
CAPN1-219ENST00000530495 TTBK1Q5TCY1 1321 aaPredicted RBP25.94■■□□□ 1.74
CAPN1-219ENST00000530495 TSPOAP1O95153 1857 aa25.94■■□□□ 1.74
CAPN1-219ENST00000530495 ABCC2Q92887 1545 aa25.92■■□□□ 1.74
CAPN1-219ENST00000530495 KDM6BO15054 1643 aa25.92■■□□□ 1.74
CAPN1-219ENST00000530495 UHRF1BP1LA0JNW5 1464 aa25.87■■□□□ 1.73
CAPN1-219ENST00000530495 DISP1Q96F81 1524 aa25.87■■□□□ 1.73
CAPN1-219ENST00000530495 ASXL2Q76L83 1435 aa25.85■■□□□ 1.73
CAPN1-219ENST00000530495 PLB1Q6P1J6 1458 aa25.85■■□□□ 1.73
CAPN1-219ENST00000530495 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
CAPN1-219ENST00000530495 UACAQ9BZF9 1416 aa25.84■■□□□ 1.73
CAPN1-219ENST00000530495 GLI2P10070 1586 aa25.82■■□□□ 1.72
CAPN1-219ENST00000530495 UGGT2Q9NYU1 1516 aa25.81■■□□□ 1.72
CAPN1-219ENST00000530495 KDM4FA0A1W2PPD8 638 aa25.78■■□□□ 1.72
CAPN1-219ENST00000530495 KDM5BQ9UGL1 1544 aa25.76■■□□□ 1.71
CAPN1-219ENST00000530495 PPRC1Q5VV67 1664 aaKnown RBP25.75■■□□□ 1.71
CAPN1-219ENST00000530495 KIAA0556O60303 1618 aa25.71■■□□□ 1.71
CAPN1-219ENST00000530495 EPRSP07814 1512 aaKnown RBP25.69■■□□□ 1.7
CAPN1-219ENST00000530495 ZCCHC11Q5TAX3 1644 aaKnown RBP25.68■■□□□ 1.7
CAPN1-219ENST00000530495 MAP3K4Q9Y6R4 1608 aa25.66■■□□□ 1.7
CAPN1-219ENST00000530495 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.69
CAPN1-219ENST00000530495 COL17A1Q9UMD9 1497 aaPredicted RBP25.61■■□□□ 1.69
CAPN1-219ENST00000530495 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
CAPN1-219ENST00000530495 TEX14Q8IWB6 1497 aa25.59■■□□□ 1.69
CAPN1-219ENST00000530495 WDR7Q9Y4E6 1490 aa25.56■■□□□ 1.68
CAPN1-219ENST00000530495 PRXQ9BXM0 1461 aa25.54■■□□□ 1.68
CAPN1-219ENST00000530495 ABCA8O94911 1581 aa25.52■■□□□ 1.68
CAPN1-219ENST00000530495 ADGRL1O94910 1474 aa25.49■■□□□ 1.67
CAPN1-219ENST00000530495 KCNH8Q96L42 1107 aa25.45■■□□□ 1.66
CAPN1-219ENST00000530495 CD109Q6YHK3 1445 aa25.45■■□□□ 1.66
CAPN1-219ENST00000530495 MAGI3Q5TCQ9 1506 aa25.43■■□□□ 1.66
CAPN1-219ENST00000530495 CFAP43Q8NDM7 1665 aa25.43■■□□□ 1.66
CAPN1-219ENST00000530495 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.66
CAPN1-219ENST00000530495 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
CAPN1-219ENST00000530495 CSRNP3Q8WYN3 585 aa25.33■■□□□ 1.65
CAPN1-219ENST00000530495 ATP10BO94823 1461 aa25.33■■□□□ 1.65
CAPN1-219ENST00000530495 ARID3CA6NKF2 412 aa25.27■■□□□ 1.64
CAPN1-219ENST00000530495 ARAP3Q8WWN8 1544 aa25.26■■□□□ 1.63
CAPN1-219ENST00000530495 SAMD9Q5K651 1589 aa25.26■■□□□ 1.63
CAPN1-219ENST00000530495 ABCA9Q8IUA7 1624 aa25.22■■□□□ 1.63
CAPN1-219ENST00000530495 PHLDB1Q86UU1 1377 aa25.2■■□□□ 1.63
CAPN1-219ENST00000530495 RAPGEF6Q8TEU7 1601 aa25.19■■□□□ 1.62
CAPN1-219ENST00000530495 HECW2Q9P2P5 1572 aa25.19■■□□□ 1.62
CAPN1-219ENST00000530495 EEA1Q15075 1411 aa25.16■■□□□ 1.62
CAPN1-219ENST00000530495 KIF21BO75037 1637 aa25.15■■□□□ 1.62
CAPN1-219ENST00000530495 ILDR1Q86SU0 546 aaPredicted RBP25.15■■□□□ 1.62
CAPN1-219ENST00000530495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.13■■□□□ 1.61
CAPN1-219ENST00000530495 HNRNPUL2Q1KMD3 747 aaKnown RBP25.13■■□□□ 1.61
CAPN1-219ENST00000530495 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
CAPN1-219ENST00000530495 NEO1Q92859 1461 aa25.1■■□□□ 1.61
CAPN1-219ENST00000530495 RAPGEF3O95398 923 aa25.09■■□□□ 1.61
CAPN1-219ENST00000530495 RANGAP1P46060 587 aaPredicted RBP25.08■■□□□ 1.61
CAPN1-219ENST00000530495 FHOD3Q2V2M9 1422 aa25.05■■□□□ 1.6
CAPN1-219ENST00000530495 PLEKHD1A6NEE1 506 aa25.03■■□□□ 1.6
CAPN1-219ENST00000530495 ADAMTSL3P82987 1691 aa25.01■■□□□ 1.59
CAPN1-219ENST00000530495 FRMPD1Q5SYB0 1578 aa24.99■■□□□ 1.59
CAPN1-219ENST00000530495 EFCAB5A4FU69 1503 aa24.97■■□□□ 1.59
CAPN1-219ENST00000530495 PTPRMP28827 1452 aa24.96■■□□□ 1.59
CAPN1-219ENST00000530495 BCORL1Q5H9F3 1711 aa24.93■■□□□ 1.58
CAPN1-219ENST00000530495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.92■■□□□ 1.58
CAPN1-219ENST00000530495 DENND4BO75064 1496 aaPredicted RBP24.92■■□□□ 1.58
CAPN1-219ENST00000530495 AKNAQ7Z591 1439 aa24.92■■□□□ 1.58
CAPN1-219ENST00000530495 FANCAO15360 1455 aa24.9■■□□□ 1.58
CAPN1-219ENST00000530495 ARID4BQ4LE39 1312 aaPredicted RBP24.9■■□□□ 1.58
CAPN1-219ENST00000530495 RICTORQ6R327 1708 aa24.9■■□□□ 1.58
CAPN1-219ENST00000530495 CFAP74Q9C0B2 1584 aa24.88■■□□□ 1.57
CAPN1-219ENST00000530495 ARHGEF40Q8TER5 1519 aa24.86■■□□□ 1.57
CAPN1-219ENST00000530495 TTC37Q6PGP7 1564 aa24.85■■□□□ 1.57
CAPN1-219ENST00000530495 MADDQ8WXG6 1647 aa24.85■■□□□ 1.57
CAPN1-219ENST00000530495 CDK13Q14004 1512 aaKnown RBP24.82■■□□□ 1.56
CAPN1-219ENST00000530495 ZMYM4Q5VZL5 1548 aa24.81■■□□□ 1.56
CAPN1-219ENST00000530495 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
CAPN1-219ENST00000530495 PLCH2O75038 1416 aa24.78■■□□□ 1.56
CAPN1-219ENST00000530495 MAGI2Q86UL8 1455 aa24.77■■□□□ 1.56
CAPN1-219ENST00000530495 FMN1Q68DA7 1419 aa24.77■■□□□ 1.56
CAPN1-219ENST00000530495 RIMS1Q86UR5 1692 aaKnown RBP24.75■■□□□ 1.55
CAPN1-219ENST00000530495 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
CAPN1-219ENST00000530495 POGZQ7Z3K3 1410 aa24.75■■□□□ 1.55
CAPN1-219ENST00000530495 ZFYVE16Q7Z3T8 1539 aa24.75■■□□□ 1.55
CAPN1-219ENST00000530495 PCF11O94913 1555 aaKnown RBP24.75■■□□□ 1.55
CAPN1-219ENST00000530495 ATP1B4Q9UN42 357 aaPredicted RBP24.74■■□□□ 1.55
CAPN1-219ENST00000530495 SCAPERQ9BY12 1400 aa24.74■■□□□ 1.55
CAPN1-219ENST00000530495 YEATS2Q9ULM3 1422 aa24.74■■□□□ 1.55
CAPN1-219ENST00000530495 LMTK3Q96Q04 1460 aa24.73■■□□□ 1.55
CAPN1-219ENST00000530495 ARHGAP35Q9NRY4 1499 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms