RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
CAPN1-219ENST00000530495 ABCC9O60706 1549 aa33.96■■■■□ 3.03
CAPN1-219ENST00000530495 CCDC180Q9P1Z9 1646 aa33.85■■■■□ 3.01
CAPN1-219ENST00000530495 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
CAPN1-219ENST00000530495 NACADO15069 1562 aa32.05■■■□□ 2.72
CAPN1-219ENST00000530495 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
CAPN1-219ENST00000530495 DCAF8L2P0C7V8 631 aa31.85■■■□□ 2.69
CAPN1-219ENST00000530495 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
CAPN1-219ENST00000530495 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
CAPN1-219ENST00000530495 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
CAPN1-219ENST00000530495 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
CAPN1-219ENST00000530495 ZCCHC6Q5VYS8 1495 aaKnown RBP31.15■■■□□ 2.58
CAPN1-219ENST00000530495 DCAF1Q9Y4B6 1507 aa31.12■■■□□ 2.57
CAPN1-219ENST00000530495 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
CAPN1-219ENST00000530495 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
CAPN1-219ENST00000530495 CC2D2AQ9P2K1 1620 aa30.69■■■□□ 2.5
CAPN1-219ENST00000530495 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
CAPN1-219ENST00000530495 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
CAPN1-219ENST00000530495 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
CAPN1-219ENST00000530495 DNAJC5Q9H3Z4 198 aa29.54■■■□□ 2.32
CAPN1-219ENST00000530495 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
CAPN1-219ENST00000530495 SMARCA4P51532 1647 aa29.39■■■□□ 2.3
CAPN1-219ENST00000530495 SMARCA2P51531 1590 aa29.38■■■□□ 2.29
CAPN1-219ENST00000530495 CUX2O14529 1486 aa29.35■■■□□ 2.29
CAPN1-219ENST00000530495 HMGXB3Q12766 1538 aa29.34■■■□□ 2.29
CAPN1-219ENST00000530495 ERCC6Q03468 1493 aa29.32■■■□□ 2.28
CAPN1-219ENST00000530495 BAZ1AQ9NRL2 1556 aaPredicted RBP29.23■■■□□ 2.27
CAPN1-219ENST00000530495 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
CAPN1-219ENST00000530495 NESP48681 1621 aa29.14■■■□□ 2.26
CAPN1-219ENST00000530495 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
CAPN1-219ENST00000530495 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.23
CAPN1-219ENST00000530495 LAMC3Q9Y6N6 1575 aa28.94■■■□□ 2.22
CAPN1-219ENST00000530495 THOC2Q8NI27 1593 aaKnown RBP28.87■■■□□ 2.21
CAPN1-219ENST00000530495 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
CAPN1-219ENST00000530495 KIF21AQ7Z4S6 1674 aa28.76■■■□□ 2.19
CAPN1-219ENST00000530495 CADPSQ9ULU8 1353 aa28.69■■■□□ 2.18
CAPN1-219ENST00000530495 WIZO95785 1651 aa28.65■■■□□ 2.18
CAPN1-219ENST00000530495 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
CAPN1-219ENST00000530495 WDR62O43379 1518 aa28.45■■■□□ 2.15
CAPN1-219ENST00000530495 RSF1Q96T23 1441 aaPredicted RBP28.37■■■□□ 2.13
CAPN1-219ENST00000530495 CEP164Q9UPV0 1460 aa28.37■■■□□ 2.13
CAPN1-219ENST00000530495 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
CAPN1-219ENST00000530495 CFTRP13569 1480 aa28.33■■■□□ 2.13
CAPN1-219ENST00000530495 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
CAPN1-219ENST00000530495 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
CAPN1-219ENST00000530495 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
CAPN1-219ENST00000530495 OSCARQ8IYS5 282 aa28.03■■■□□ 2.08
CAPN1-219ENST00000530495 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
CAPN1-219ENST00000530495 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
CAPN1-219ENST00000530495 IFT140Q96RY7 1462 aa27.83■■■□□ 2.04
CAPN1-219ENST00000530495 TOPBP1Q92547 1522 aa27.79■■■□□ 2.04
CAPN1-219ENST00000530495 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
CAPN1-219ENST00000530495 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
CAPN1-219ENST00000530495 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
CAPN1-219ENST00000530495 RIMBP3CA6NJZ7 1639 aa27.63■■■□□ 2.01
CAPN1-219ENST00000530495 RIMBP3BA6NNM3 1639 aa27.63■■■□□ 2.01
CAPN1-219ENST00000530495 RIMBP3Q9UFD9 1639 aa27.63■■■□□ 2.01
CAPN1-219ENST00000530495 EIF4G3O43432 1585 aaKnown RBP27.6■■■□□ 2.01
CAPN1-219ENST00000530495 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
CAPN1-219ENST00000530495 AQRO60306 1485 aaKnown RBP eCLIP27.53■■■□□ 22e-6■■■■□ 21.2
CAPN1-219ENST00000530495 ARHGEF11O15085 1522 aa27.51■■■□□ 2
CAPN1-219ENST00000530495 POLA1P09884 1462 aaPredicted RBP27.49■■□□□ 1.99
CAPN1-219ENST00000530495 CHD1O14646 1710 aa27.44■■□□□ 1.98
CAPN1-219ENST00000530495 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
CAPN1-219ENST00000530495 SOGA1O94964 1423 aa27.39■■□□□ 1.97
CAPN1-219ENST00000530495 FBLN2P98095 1184 aa27.37■■□□□ 1.97
CAPN1-219ENST00000530495 CYB5RLQ6IPT4 315 aa27.36■■□□□ 1.97
CAPN1-219ENST00000530495 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
CAPN1-219ENST00000530495 FGD5Q6ZNL6 1462 aa27.29■■□□□ 1.96
CAPN1-219ENST00000530495 WDR97A6NE52 1622 aa27.27■■□□□ 1.96
CAPN1-219ENST00000530495 CUX1P39880 1505 aa27.26■■□□□ 1.95
CAPN1-219ENST00000530495 ARAP1Q96P48 1450 aa27.24■■□□□ 1.95
CAPN1-219ENST00000530495 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
CAPN1-219ENST00000530495 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
CAPN1-219ENST00000530495 MAGI1Q96QZ7 1491 aaPredicted RBP27.17■■□□□ 1.94
CAPN1-219ENST00000530495 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
CAPN1-219ENST00000530495 CLASP1Q7Z460 1538 aa27.13■■□□□ 1.93
CAPN1-219ENST00000530495 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
CAPN1-219ENST00000530495 SYNJ2O15056 1496 aa27.08■■□□□ 1.93
CAPN1-219ENST00000530495 TRHP20396 242 aaPredicted RBP27.08■■□□□ 1.93
CAPN1-219ENST00000530495 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
CAPN1-219ENST00000530495 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
CAPN1-219ENST00000530495 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
CAPN1-219ENST00000530495 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
CAPN1-219ENST00000530495 ABCA5Q8WWZ7 1642 aa26.95■■□□□ 1.91
CAPN1-219ENST00000530495 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
CAPN1-219ENST00000530495 GRIN2AQ12879 1464 aa26.8■■□□□ 1.88
CAPN1-219ENST00000530495 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
CAPN1-219ENST00000530495 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
CAPN1-219ENST00000530495 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
CAPN1-219ENST00000530495 NUP160Q12769 1436 aa26.73■■□□□ 1.87
CAPN1-219ENST00000530495 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
CAPN1-219ENST00000530495 CEP170Q5SW79 1584 aa26.7■■□□□ 1.86
CAPN1-219ENST00000530495 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
CAPN1-219ENST00000530495 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
CAPN1-219ENST00000530495 SHROOM2Q13796 1616 aa26.62■■□□□ 1.85
CAPN1-219ENST00000530495 JPH4Q96JJ6 628 aa26.49■■□□□ 1.83
CAPN1-219ENST00000530495 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
CAPN1-219ENST00000530495 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
CAPN1-219ENST00000530495 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms