RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 SMARCA2P51531 1590 aa7.13□□□□□ -1.27
GMDS-207ENST00000530459 CLIP1P30622 1438 aa7.13□□□□□ -1.27
GMDS-207ENST00000530459 APLP2Q06481 763 aa7.13□□□□□ -1.27
GMDS-207ENST00000530459 HNRNPUL2Q1KMD3 747 aaKnown RBP7.13□□□□□ -1.27
GMDS-207ENST00000530459 SAMD1Q6SPF0 538 aaPredicted RBP7.13□□□□□ -1.27
GMDS-207ENST00000530459 FBXO3Q9UK99 471 aa7.12□□□□□ -1.27
GMDS-207ENST00000530459 CCER2I3L3R5 266 aa7.11□□□□□ -1.27
GMDS-207ENST00000530459 HAP1P54257 671 aaPredicted RBP7.11□□□□□ -1.27
GMDS-207ENST00000530459 ERICH6BQ5W0A0 696 aa7.11□□□□□ -1.27
GMDS-207ENST00000530459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.11□□□□□ -1.278e-7■■■□□ 15.6
GMDS-207ENST00000530459 RRBP1Q9P2E9 1410 aaKnown RBP7.1□□□□□ -1.27
GMDS-207ENST00000530459 NEFLP07196 543 aa7.1□□□□□ -1.27
GMDS-207ENST00000530459 DCAF8L1A6NGE4 600 aa7.09□□□□□ -1.27
GMDS-207ENST00000530459 UBTFP17480 764 aaKnown RBP7.09□□□□□ -1.27
GMDS-207ENST00000530459 RUSC2Q8N2Y8 1516 aa7.08□□□□□ -1.28
GMDS-207ENST00000530459 BCANQ96GW7 911 aa7.07□□□□□ -1.28
GMDS-207ENST00000530459 TIMELESSQ9UNS1 1208 aa7.07□□□□□ -1.28
GMDS-207ENST00000530459 SMARCA4P51532 1647 aa7.05□□□□□ -1.28
GMDS-207ENST00000530459 ERICH3Q5RHP9 1530 aa7.03□□□□□ -1.28
GMDS-207ENST00000530459 PPP1R15AO75807 674 aaPredicted RBP7.03□□□□□ -1.28
GMDS-207ENST00000530459 CDK11AQ9UQ88 783 aaPredicted RBP7.03□□□□□ -1.28
GMDS-207ENST00000530459 MAPKBP1O60336 1514 aa7.02□□□□□ -1.29
GMDS-207ENST00000530459 SPDYE4A6NLX3 237 aa7.02□□□□□ -1.29
GMDS-207ENST00000530459 DEKP35659 375 aaKnown RBP7.02□□□□□ -1.29
GMDS-207ENST00000530459 U3KPZ7 1027 aaPredicted RBP7.02□□□□□ -1.29
GMDS-207ENST00000530459 SYNJ1O43426 1573 aa7.02□□□□□ -1.29
GMDS-207ENST00000530459 VASPP50552 380 aaPredicted RBP7.01□□□□□ -1.29
GMDS-207ENST00000530459 KCNH8Q96L42 1107 aa7.01□□□□□ -1.29
GMDS-207ENST00000530459 ZNF219Q9P2Y4 722 aaPredicted RBP7.01□□□□□ -1.29
GMDS-207ENST00000530459 MAP3K1Q13233 1512 aa7.01□□□□□ -1.29
GMDS-207ENST00000530459 PEG3Q9GZU2 1588 aa6.99□□□□□ -1.29
GMDS-207ENST00000530459 ARAP1Q96P48 1450 aa6.98□□□□□ -1.29
GMDS-207ENST00000530459 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
GMDS-207ENST00000530459 CCNB3Q8WWL7 1395 aa6.97□□□□□ -1.29
GMDS-207ENST00000530459 PPP4R2Q9NY27 417 aa6.97□□□□□ -1.29
GMDS-207ENST00000530459 TAOK2Q9UL54 1235 aa6.97□□□□□ -1.29
GMDS-207ENST00000530459 ANP32CO43423 234 aa6.96□□□□□ -1.3
GMDS-207ENST00000530459 VSIG10Q8N0Z9 540 aa6.96□□□□□ -1.3
GMDS-207ENST00000530459 WDR97A6NE52 1622 aa6.96□□□□□ -1.3
GMDS-207ENST00000530459 PRXQ9BXM0 1461 aa6.96□□□□□ -1.3
GMDS-207ENST00000530459 SETD5Q9C0A6 1442 aa6.94□□□□□ -1.3
GMDS-207ENST00000530459 DDX10Q13206 875 aaKnown RBP6.94□□□□□ -1.3
GMDS-207ENST00000530459 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
GMDS-207ENST00000530459 RAB3GAP2Q9H2M9 1393 aa6.94□□□□□ -1.3
GMDS-207ENST00000530459 ITGAEP38570 1179 aa6.93□□□□□ -1.3
GMDS-207ENST00000530459 IFNLR1Q8IU57 520 aaPredicted RBP6.93□□□□□ -1.3
GMDS-207ENST00000530459 PROM2Q8N271 834 aa6.93□□□□□ -1.3
GMDS-207ENST00000530459 UBE2Q2Q8WVN8 375 aa6.93□□□□□ -1.3
GMDS-207ENST00000530459 TOP2BQ02880 1626 aa6.93□□□□□ -1.3
GMDS-207ENST00000530459 BIVM-ERCC5R4GMW8 1640 aa6.92□□□□□ -1.3
GMDS-207ENST00000530459 C11orf95C9JLR9 678 aaPredicted RBP6.91□□□□□ -1.3
GMDS-207ENST00000530459 KANK4Q5T7N3 995 aaPredicted RBP6.91□□□□□ -1.3
GMDS-207ENST00000530459 ANO8Q9HCE9 1232 aaPredicted RBP6.91□□□□□ -1.3
GMDS-207ENST00000530459 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
GMDS-207ENST00000530459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.91□□□□□ -1.3
GMDS-207ENST00000530459 PKD2Q13563 968 aa6.9□□□□□ -1.3
GMDS-207ENST00000530459 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.9□□□□□ -1.3
GMDS-207ENST00000530459 NCAPD3P42695 1498 aa6.9□□□□□ -1.31
GMDS-207ENST00000530459 TRIM52Q96A61 297 aa6.89□□□□□ -1.31
GMDS-207ENST00000530459 USP35Q9P2H5 1018 aa6.89□□□□□ -1.31
GMDS-207ENST00000530459 TIAM1Q13009 1591 aa6.88□□□□□ -1.31
GMDS-207ENST00000530459 FHAD1B1AJZ9 1412 aa6.88□□□□□ -1.31
GMDS-207ENST00000530459 FBLN2P98095 1184 aa6.88□□□□□ -1.31
GMDS-207ENST00000530459 MKRN4PQ13434 485 aaPredicted RBP6.88□□□□□ -1.31
GMDS-207ENST00000530459 TPRNQ4KMQ1 711 aa6.88□□□□□ -1.31
GMDS-207ENST00000530459 WASHC2CQ9Y4E1 1318 aa6.87□□□□□ -1.31
GMDS-207ENST00000530459 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
GMDS-207ENST00000530459 NCOA2Q15596 1464 aa6.86□□□□□ -1.31
GMDS-207ENST00000530459 ARHGAP35Q9NRY4 1499 aa6.86□□□□□ -1.31
GMDS-207ENST00000530459 RTL5Q5HYW3 569 aaPredicted RBP6.86□□□□□ -1.31
GMDS-207ENST00000530459 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
GMDS-207ENST00000530459 RNF123Q5XPI4 1314 aa6.85□□□□□ -1.31
GMDS-207ENST00000530459 ZBED9Q6R2W3 1325 aa6.84□□□□□ -1.31
GMDS-207ENST00000530459 PAK3O75914 559 aaPredicted RBP6.84□□□□□ -1.31
GMDS-207ENST00000530459 HNRNPUQ00839 825 aaKnown RBP eCLIP6.84□□□□□ -1.31
GMDS-207ENST00000530459 BBXQ8WY36 941 aaPredicted RBP6.84□□□□□ -1.31
GMDS-207ENST00000530459 CFAP43Q8NDM7 1665 aa6.84□□□□□ -1.32
GMDS-207ENST00000530459 ANP32AP39687 249 aaKnown RBP6.83□□□□□ -1.32
GMDS-207ENST00000530459 PAXIP1Q6ZW49 1069 aaPredicted RBP6.83□□□□□ -1.32
GMDS-207ENST00000530459 LRRC9Q6ZRR7 1453 aa6.83□□□□□ -1.32
GMDS-207ENST00000530459 KDM5BQ9UGL1 1544 aa6.82□□□□□ -1.32
GMDS-207ENST00000530459 UNC13AQ9UPW8 1703 aa6.82□□□□□ -1.32
GMDS-207ENST00000530459 CFAP44Q96MT7 982 aa6.82□□□□□ -1.32
GMDS-207ENST00000530459 SIN3AQ96ST3 1273 aa6.82□□□□□ -1.32
GMDS-207ENST00000530459 ZBTB47Q9UFB7 747 aaPredicted RBP6.82□□□□□ -1.32
GMDS-207ENST00000530459 KDM2AQ9Y2K7 1162 aa6.82□□□□□ -1.32
GMDS-207ENST00000530459 SMG6Q86US8 1419 aaKnown RBP6.82□□□□□ -1.32
GMDS-207ENST00000530459 ECM2O94769 699 aaPredicted RBP6.81□□□□□ -1.32
GMDS-207ENST00000530459 CCDC136Q96JN2 1154 aa6.81□□□□□ -1.32
GMDS-207ENST00000530459 CNTLNQ9NXG0 1405 aa6.81□□□□□ -1.32
GMDS-207ENST00000530459 ABCA5Q8WWZ7 1642 aa6.8□□□□□ -1.32
GMDS-207ENST00000530459 PPM1GO15355 546 aaPredicted RBP6.8□□□□□ -1.32
GMDS-207ENST00000530459 NBR1Q14596 966 aa6.8□□□□□ -1.32
GMDS-207ENST00000530459 KIF27Q86VH2 1401 aa6.8□□□□□ -1.32
GMDS-207ENST00000530459 KLHL34Q8N239 644 aa6.8□□□□□ -1.32
GMDS-207ENST00000530459 UACAQ9BZF9 1416 aa6.8□□□□□ -1.32
GMDS-207ENST00000530459 TONSLQ96HA7 1378 aa6.8□□□□□ -1.32
GMDS-207ENST00000530459 SPOCK2Q92563 424 aa6.79□□□□□ -1.32
GMDS-207ENST00000530459 PHLDB1Q86UU1 1377 aa6.79□□□□□ -1.32
GMDS-207ENST00000530459 POLR1AO95602 1720 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms