RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 IGF1RP08069 1367 aa33.42■■■□□ 2.94
SYVN1-212ENST00000530451 CUL7Q14999 1698 aa33.41■■■□□ 2.94
SYVN1-212ENST00000530451 KIAA0586Q9BVV6 1533 aa33.25■■■□□ 2.91
SYVN1-212ENST00000530451 CARMIL1Q5VZK9 1371 aa33.21■■■□□ 2.91
SYVN1-212ENST00000530451 KIF13AQ9H1H9 1805 aa33.18■■■□□ 2.9
SYVN1-212ENST00000530451 ADCY10Q96PN6 1610 aa33.1■■■□□ 2.89
SYVN1-212ENST00000530451 NPM1P06748 294 aaKnown RBP eCLIP33.05■■■□□ 2.88
SYVN1-212ENST00000530451 TTBK1Q5TCY1 1321 aaPredicted RBP33.04■■■□□ 2.88
SYVN1-212ENST00000530451 IQGAP2Q13576 1575 aa33.01■■■□□ 2.88
SYVN1-212ENST00000530451 PTPRGP23470 1445 aa32.94■■■□□ 2.86
SYVN1-212ENST00000530451 RAPGEF2Q9Y4G8 1499 aa32.93■■■□□ 2.86
SYVN1-212ENST00000530451 MAPKBP1O60336 1514 aa32.93■■■□□ 2.86
SYVN1-212ENST00000530451 CARMIL2Q6F5E8 1435 aa32.93■■■□□ 2.86
SYVN1-212ENST00000530451 FAM69CQ0P6D2 419 aa32.92■■■□□ 2.86
SYVN1-212ENST00000530451 ABCC10Q5T3U5 1492 aa32.9■■■□□ 2.86
SYVN1-212ENST00000530451 TNIKQ9UKE5 1360 aa32.88■■■□□ 2.85
SYVN1-212ENST00000530451 DIP2BQ9P265 1576 aa32.87■■■□□ 2.85
SYVN1-212ENST00000530451 TSPOAP1O95153 1857 aa32.84■■■□□ 2.85
SYVN1-212ENST00000530451 DISP1Q96F81 1524 aa32.82■■■□□ 2.84
SYVN1-212ENST00000530451 CTTNBP2Q8WZ74 1663 aa32.79■■■□□ 2.84
SYVN1-212ENST00000530451 UGGT2Q9NYU1 1516 aa32.76■■■□□ 2.83
SYVN1-212ENST00000530451 ABCC2Q92887 1545 aa32.73■■■□□ 2.83
SYVN1-212ENST00000530451 KIAA0556O60303 1618 aa32.72■■■□□ 2.83
SYVN1-212ENST00000530451 AEBP2Q6ZN18 517 aaPredicted RBP32.71■■■□□ 2.83
SYVN1-212ENST00000530451 UACAQ9BZF9 1416 aa32.68■■■□□ 2.82
SYVN1-212ENST00000530451 UHRF1BP1LA0JNW5 1464 aa32.66■■■□□ 2.82
SYVN1-212ENST00000530451 ASXL2Q76L83 1435 aa32.62■■■□□ 2.81
SYVN1-212ENST00000530451 PRXQ9BXM0 1461 aa32.61■■■□□ 2.81
SYVN1-212ENST00000530451 KDM6BO15054 1643 aa32.58■■■□□ 2.81
SYVN1-212ENST00000530451 PLB1Q6P1J6 1458 aa32.57■■■□□ 2.8
SYVN1-212ENST00000530451 ZCCHC11Q5TAX3 1644 aaKnown RBP32.57■■■□□ 2.8
SYVN1-212ENST00000530451 KDM5BQ9UGL1 1544 aa32.53■■■□□ 2.8
SYVN1-212ENST00000530451 GOLGA3Q08378 1498 aa32.5■■■□□ 2.79
SYVN1-212ENST00000530451 PPRC1Q5VV67 1664 aaKnown RBP32.5■■■□□ 2.79
SYVN1-212ENST00000530451 GLI2P10070 1586 aa32.49■■■□□ 2.79
SYVN1-212ENST00000530451 CSRNP3Q8WYN3 585 aa32.43■■■□□ 2.78
SYVN1-212ENST00000530451 EPRSP07814 1512 aaKnown RBP32.42■■■□□ 2.78
SYVN1-212ENST00000530451 ABCA8O94911 1581 aa32.39■■■□□ 2.78
SYVN1-212ENST00000530451 MAP3K4Q9Y6R4 1608 aa32.38■■■□□ 2.77
SYVN1-212ENST00000530451 P3H3Q8IVL6 736 aa32.37■■■□□ 2.77
SYVN1-212ENST00000530451 WDR7Q9Y4E6 1490 aa32.32■■■□□ 2.76
SYVN1-212ENST00000530451 FAM9AQ8IZU1 332 aaPredicted RBP32.31■■■□□ 2.76
SYVN1-212ENST00000530451 EEA1Q15075 1411 aa32.26■■■□□ 2.75
SYVN1-212ENST00000530451 ARID3CA6NKF2 412 aa32.25■■■□□ 2.75
SYVN1-212ENST00000530451 KCNH8Q96L42 1107 aa32.25■■■□□ 2.75
SYVN1-212ENST00000530451 SAMD9Q5K651 1589 aa32.24■■■□□ 2.75
SYVN1-212ENST00000530451 RANGAP1P46060 587 aaPredicted RBP32.23■■■□□ 2.75
SYVN1-212ENST00000530451 TEX14Q8IWB6 1497 aa32.22■■■□□ 2.75
SYVN1-212ENST00000530451 COL17A1Q9UMD9 1497 aaPredicted RBP32.2■■■□□ 2.75
SYVN1-212ENST00000530451 CFAP43Q8NDM7 1665 aa32.18■■■□□ 2.74
SYVN1-212ENST00000530451 KDM4FA0A1W2PPD8 638 aa32.15■■■□□ 2.74
SYVN1-212ENST00000530451 RAPGEF6Q8TEU7 1601 aa32.12■■■□□ 2.73
SYVN1-212ENST00000530451 CD109Q6YHK3 1445 aa32.12■■■□□ 2.73
SYVN1-212ENST00000530451 ATP10BO94823 1461 aa32.11■■■□□ 2.73
SYVN1-212ENST00000530451 KIF21BO75037 1637 aa32.08■■■□□ 2.73
SYVN1-212ENST00000530451 FHOD3Q2V2M9 1422 aa32.05■■■□□ 2.72
SYVN1-212ENST00000530451 MAGI3Q5TCQ9 1506 aa32.05■■■□□ 2.72
SYVN1-212ENST00000530451 EHMT2Q96KQ7 1210 aa32.04■■■□□ 2.72
SYVN1-212ENST00000530451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.01■■■□□ 2.71
SYVN1-212ENST00000530451 HNRNPUL2Q1KMD3 747 aaKnown RBP32.01■■■□□ 2.71
SYVN1-212ENST00000530451 CHIC1Q5VXU3 224 aa32■■■□□ 2.71
SYVN1-212ENST00000530451 ADGRL1O94910 1474 aa31.95■■■□□ 2.7
SYVN1-212ENST00000530451 NUP153P49790 1475 aaKnown RBP31.95■■■□□ 2.7
SYVN1-212ENST00000530451 ABCA9Q8IUA7 1624 aa31.94■■■□□ 2.7
SYVN1-212ENST00000530451 EFCAB5A4FU69 1503 aa31.9■■■□□ 2.7
SYVN1-212ENST00000530451 UBTFP17480 764 aaKnown RBP31.87■■■□□ 2.69
SYVN1-212ENST00000530451 ARAP3Q8WWN8 1544 aa31.8■■■□□ 2.68
SYVN1-212ENST00000530451 PLEKHD1A6NEE1 506 aa31.76■■■□□ 2.67
SYVN1-212ENST00000530451 CDK13Q14004 1512 aaKnown RBP31.72■■■□□ 2.67
SYVN1-212ENST00000530451 RAPGEF3O95398 923 aa31.69■■■□□ 2.66
SYVN1-212ENST00000530451 ATP1B4Q9UN42 357 aaPredicted RBP31.69■■■□□ 2.66
SYVN1-212ENST00000530451 NEO1Q92859 1461 aa31.69■■■□□ 2.66
SYVN1-212ENST00000530451 PHLDB1Q86UU1 1377 aa31.68■■■□□ 2.66
SYVN1-212ENST00000530451 ARHGAP35Q9NRY4 1499 aa31.68■■■□□ 2.66
SYVN1-212ENST00000530451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.65■■■□□ 2.661e-7■■■□□ 15.5
SYVN1-212ENST00000530451 TTC37Q6PGP7 1564 aa31.64■■■□□ 2.66
SYVN1-212ENST00000530451 FRMPD1Q5SYB0 1578 aa31.62■■■□□ 2.65
SYVN1-212ENST00000530451 HECW1Q76N89 1606 aa31.61■■■□□ 2.65
SYVN1-212ENST00000530451 FMN1Q68DA7 1419 aa31.6■■■□□ 2.65
SYVN1-212ENST00000530451 FANCAO15360 1455 aa31.56■■■□□ 2.64
SYVN1-212ENST00000530451 CFAP74Q9C0B2 1584 aa31.56■■■□□ 2.64
SYVN1-212ENST00000530451 RICTORQ6R327 1708 aa31.55■■■□□ 2.64
SYVN1-212ENST00000530451 LRRIQ1Q96JM4 1722 aa31.55■■■□□ 2.64
SYVN1-212ENST00000530451 AKNAQ7Z591 1439 aa31.54■■■□□ 2.64
SYVN1-212ENST00000530451 DENND4BO75064 1496 aaPredicted RBP31.5■■■□□ 2.63
SYVN1-212ENST00000530451 HECW2Q9P2P5 1572 aa31.48■■■□□ 2.63
SYVN1-212ENST00000530451 MYO5CQ9NQX4 1742 aa31.46■■■□□ 2.63
SYVN1-212ENST00000530451 KIF14Q15058 1648 aa31.46■■■□□ 2.63
SYVN1-212ENST00000530451 ADAMTSL3P82987 1691 aa31.44■■■□□ 2.62
SYVN1-212ENST00000530451 ARID4BQ4LE39 1312 aaPredicted RBP31.44■■■□□ 2.62
SYVN1-212ENST00000530451 BCORL1Q5H9F3 1711 aa31.42■■■□□ 2.62
SYVN1-212ENST00000530451 CDK11AQ9UQ88 783 aaPredicted RBP31.42■■■□□ 2.62
SYVN1-212ENST00000530451 ARHGEF40Q8TER5 1519 aa31.41■■■□□ 2.62
SYVN1-212ENST00000530451 PLCH2O75038 1416 aa31.41■■■□□ 2.62
SYVN1-212ENST00000530451 PCF11O94913 1555 aaKnown RBP31.39■■■□□ 2.61
SYVN1-212ENST00000530451 MADDQ8WXG6 1647 aa31.35■■■□□ 2.61
SYVN1-212ENST00000530451 TROQ12816 1431 aaPredicted RBP31.35■■■□□ 2.61
SYVN1-212ENST00000530451 ZMYM4Q5VZL5 1548 aa31.34■■■□□ 2.61
SYVN1-212ENST00000530451 SCAPERQ9BY12 1400 aa31.34■■■□□ 2.61
SYVN1-212ENST00000530451 PTPRMP28827 1452 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms