RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 NISCHQ9Y2I1 1504 aa47.84■■■■■ 5.25
SYVN1-212ENST00000530451 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.45
SYVN1-212ENST00000530451 ABCC9O60706 1549 aa42.74■■■■■ 4.43
SYVN1-212ENST00000530451 RB1CC1Q8TDY2 1594 aa40.71■■■■■ 4.11
SYVN1-212ENST00000530451 NACADO15069 1562 aa40.44■■■■■ 4.06
SYVN1-212ENST00000530451 DCAF8L2P0C7V8 631 aa40.44■■■■■ 4.06
SYVN1-212ENST00000530451 UNC13AQ9UPW8 1703 aa39.97■■■■□ 3.99
SYVN1-212ENST00000530451 DNAJC5BQ9UF47 199 aa39.89■■■■□ 3.98
SYVN1-212ENST00000530451 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
SYVN1-212ENST00000530451 PABPN1Q86U42 306 aaKnown RBP eCLIP39.83■■■■□ 3.97
SYVN1-212ENST00000530451 ZCCHC6Q5VYS8 1495 aaKnown RBP39.68■■■■□ 3.94
SYVN1-212ENST00000530451 BICRAQ9NZM4 1560 aa39.54■■■■□ 3.92
SYVN1-212ENST00000530451 DCAF1Q9Y4B6 1507 aa39.45■■■■□ 3.91
SYVN1-212ENST00000530451 SCRIBQ14160 1630 aa39.17■■■■□ 3.86
SYVN1-212ENST00000530451 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
SYVN1-212ENST00000530451 CC2D2AQ9P2K1 1620 aa38.62■■■■□ 3.77
SYVN1-212ENST00000530451 EIF4G1Q04637 1599 aaKnown RBP38.55■■■■□ 3.76
SYVN1-212ENST00000530451 CECR2Q9BXF3 1484 aa38.43■■■■□ 3.74
SYVN1-212ENST00000530451 SMARCA4P51532 1647 aa37.33■■■■□ 3.57
SYVN1-212ENST00000530451 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
SYVN1-212ENST00000530451 ATAD2BQ9ULI0 1458 aa37.26■■■■□ 3.55
SYVN1-212ENST00000530451 SMARCA2P51531 1590 aa37.17■■■■□ 3.54
SYVN1-212ENST00000530451 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
SYVN1-212ENST00000530451 HMGXB3Q12766 1538 aa37.07■■■■□ 3.53
SYVN1-212ENST00000530451 BAZ1BQ9UIG0 1483 aaKnown RBP36.94■■■■□ 3.5
SYVN1-212ENST00000530451 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
SYVN1-212ENST00000530451 PEG3Q9GZU2 1588 aa36.88■■■■□ 3.49
SYVN1-212ENST00000530451 ERCC6Q03468 1493 aa36.87■■■■□ 3.49
SYVN1-212ENST00000530451 NESP48681 1621 aa36.78■■■■□ 3.48
SYVN1-212ENST00000530451 CUX2O14529 1486 aa36.64■■■■□ 3.46
SYVN1-212ENST00000530451 WIZO95785 1651 aa36.56■■■■□ 3.44
SYVN1-212ENST00000530451 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
SYVN1-212ENST00000530451 DNAJC5Q9H3Z4 198 aa36.42■■■■□ 3.42
SYVN1-212ENST00000530451 KIF21AQ7Z4S6 1674 aa36.39■■■■□ 3.42
SYVN1-212ENST00000530451 THOC2Q8NI27 1593 aaKnown RBP36.34■■■■□ 3.41
SYVN1-212ENST00000530451 PDS5BQ9NTI5 1447 aa36.23■■■■□ 3.39
SYVN1-212ENST00000530451 CADPSQ9ULU8 1353 aa36.2■■■■□ 3.39
SYVN1-212ENST00000530451 RSF1Q96T23 1441 aaPredicted RBP36.17■■■■□ 3.38
SYVN1-212ENST00000530451 TOP2AP11388 1531 aaKnown RBP36.01■■■■□ 3.36
SYVN1-212ENST00000530451 MRC2Q9UBG0 1479 aa35.94■■■■□ 3.34
SYVN1-212ENST00000530451 CEP164Q9UPV0 1460 aa35.85■■■■□ 3.33
SYVN1-212ENST00000530451 WDR62O43379 1518 aa35.84■■■■□ 3.33
SYVN1-212ENST00000530451 FANCD2Q9BXW9 1451 aa35.83■■■■□ 3.33
SYVN1-212ENST00000530451 CFTRP13569 1480 aa35.82■■■■□ 3.32
SYVN1-212ENST00000530451 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
SYVN1-212ENST00000530451 CCDC88BA6NC98 1476 aa35.61■■■■□ 3.29
SYVN1-212ENST00000530451 URB2Q14146 1524 aaKnown RBP35.53■■■■□ 3.28
SYVN1-212ENST00000530451 TOPBP1Q92547 1522 aa35.19■■■■□ 3.22
SYVN1-212ENST00000530451 IFT140Q96RY7 1462 aa35.09■■■■□ 3.21
SYVN1-212ENST00000530451 ZNF608Q9ULD9 1512 aaPredicted RBP35.09■■■■□ 3.21
SYVN1-212ENST00000530451 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
SYVN1-212ENST00000530451 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
SYVN1-212ENST00000530451 OSCARQ8IYS5 282 aa35.04■■■■□ 3.2
SYVN1-212ENST00000530451 TRIM41Q8WV44 630 aa35.04■■■■□ 3.2
SYVN1-212ENST00000530451 EIF4G3O43432 1585 aaKnown RBP34.92■■■■□ 3.18
SYVN1-212ENST00000530451 TARBP1Q13395 1621 aaKnown RBP34.88■■■■□ 3.17
SYVN1-212ENST00000530451 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
SYVN1-212ENST00000530451 POLA1P09884 1462 aaPredicted RBP34.83■■■■□ 3.17
SYVN1-212ENST00000530451 AQRO60306 1485 aaKnown RBP eCLIP34.79■■■■□ 3.163e-8■■■□□ 18.1
SYVN1-212ENST00000530451 RAD54L2Q9Y4B4 1467 aa34.75■■■■□ 3.15
SYVN1-212ENST00000530451 CHD1O14646 1710 aa34.72■■■■□ 3.15
SYVN1-212ENST00000530451 SOGA1O94964 1423 aa34.67■■■■□ 3.14
SYVN1-212ENST00000530451 CUX1P39880 1505 aa34.66■■■■□ 3.14
SYVN1-212ENST00000530451 FGD5Q6ZNL6 1462 aa34.66■■■■□ 3.14
SYVN1-212ENST00000530451 RIMBP3CA6NJZ7 1639 aa34.65■■■■□ 3.14
SYVN1-212ENST00000530451 RIMBP3BA6NNM3 1639 aa34.65■■■■□ 3.14
SYVN1-212ENST00000530451 RIMBP3Q9UFD9 1639 aa34.65■■■■□ 3.14
SYVN1-212ENST00000530451 TDRD9Q8NDG6 1382 aaKnown RBP34.61■■■■□ 3.13
SYVN1-212ENST00000530451 FBLN2P98095 1184 aa34.57■■■■□ 3.12
SYVN1-212ENST00000530451 ARHGEF11O15085 1522 aa34.5■■■■□ 3.11
SYVN1-212ENST00000530451 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
SYVN1-212ENST00000530451 SNAPC4Q5SXM2 1469 aa34.43■■■■□ 3.1
SYVN1-212ENST00000530451 PBRM1Q86U86 1689 aa34.35■■■■□ 3.09
SYVN1-212ENST00000530451 GRIN2BQ13224 1484 aa34.33■■■■□ 3.09
SYVN1-212ENST00000530451 MAGI1Q96QZ7 1491 aaPredicted RBP34.29■■■■□ 3.08
SYVN1-212ENST00000530451 CHMP7Q8WUX9 453 aaPredicted RBP34.28■■■■□ 3.08
SYVN1-212ENST00000530451 CYB5RLQ6IPT4 315 aa34.27■■■■□ 3.08
SYVN1-212ENST00000530451 GAPVD1Q14C86 1478 aa34.26■■■■□ 3.07
SYVN1-212ENST00000530451 ABCA10Q8WWZ4 1543 aa34.23■■■■□ 3.07
SYVN1-212ENST00000530451 ABCA5Q8WWZ7 1642 aa34.21■■■■□ 3.07
SYVN1-212ENST00000530451 SYNJ2O15056 1496 aa34.2■■■■□ 3.06
SYVN1-212ENST00000530451 SYNJ1O43426 1573 aa34.19■■■■□ 3.06
SYVN1-212ENST00000530451 BIVM-ERCC5R4GMW8 1640 aa34.19■■■■□ 3.06
SYVN1-212ENST00000530451 ARAP1Q96P48 1450 aa34.18■■■■□ 3.06
SYVN1-212ENST00000530451 CLASP1Q7Z460 1538 aa34.18■■■■□ 3.06
SYVN1-212ENST00000530451 TOP2BQ02880 1626 aa34.15■■■■□ 3.06
SYVN1-212ENST00000530451 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
SYVN1-212ENST00000530451 ADAMTS12P58397 1594 aa33.94■■■■□ 3.02
SYVN1-212ENST00000530451 GRIN2AQ12879 1464 aa33.91■■■■□ 3.02
SYVN1-212ENST00000530451 TRHP20396 242 aaPredicted RBP33.86■■■■□ 3.01
SYVN1-212ENST00000530451 CEP170Q5SW79 1584 aa33.82■■■■□ 3
SYVN1-212ENST00000530451 ERICH3Q5RHP9 1530 aa33.8■■■■□ 3
SYVN1-212ENST00000530451 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
SYVN1-212ENST00000530451 ERCC6L2Q5T890 1561 aa33.75■■■□□ 2.99
SYVN1-212ENST00000530451 NUP160Q12769 1436 aa33.74■■■□□ 2.99
SYVN1-212ENST00000530451 SHROOM2Q13796 1616 aa33.64■■■□□ 2.98
SYVN1-212ENST00000530451 RUSC2Q8N2Y8 1516 aa33.46■■■□□ 2.95
SYVN1-212ENST00000530451 KIF27Q86VH2 1401 aa33.45■■■□□ 2.95
SYVN1-212ENST00000530451 PRG4Q92954 1404 aaPredicted RBP33.45■■■□□ 2.95
SYVN1-212ENST00000530451 JPH4Q96JJ6 628 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms