RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 CTTNBP2Q8WZ74 1663 aa18.31■□□□□ 0.52
CAPN1-218ENST00000530442 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
CAPN1-218ENST00000530442 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
CAPN1-218ENST00000530442 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
CAPN1-218ENST00000530442 ARHGEF11O15085 1522 aa18.27■□□□□ 0.51
CAPN1-218ENST00000530442 KIAA0586Q9BVV6 1533 aa18.26■□□□□ 0.51
CAPN1-218ENST00000530442 IQGAP2Q13576 1575 aa18.25■□□□□ 0.51
CAPN1-218ENST00000530442 ERCC6L2Q5T890 1561 aa18.21■□□□□ 0.51
CAPN1-218ENST00000530442 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
CAPN1-218ENST00000530442 ARAP1Q96P48 1450 aa18.14■□□□□ 0.5
CAPN1-218ENST00000530442 UGGT2Q9NYU1 1516 aa18.14■□□□□ 0.49
CAPN1-218ENST00000530442 PRG4Q92954 1404 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-218ENST00000530442 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
CAPN1-218ENST00000530442 KIAA0556O60303 1618 aa18.1■□□□□ 0.49
CAPN1-218ENST00000530442 DISP1Q96F81 1524 aa18.09■□□□□ 0.49
CAPN1-218ENST00000530442 SAMD9Q5K651 1589 aa18.06■□□□□ 0.48
CAPN1-218ENST00000530442 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
CAPN1-218ENST00000530442 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.48
CAPN1-218ENST00000530442 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
CAPN1-218ENST00000530442 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
CAPN1-218ENST00000530442 TNIKQ9UKE5 1360 aa17.96■□□□□ 0.47
CAPN1-218ENST00000530442 CYB5RLQ6IPT4 315 aa17.95■□□□□ 0.46
CAPN1-218ENST00000530442 ADCY10Q96PN6 1610 aa17.93■□□□□ 0.46
CAPN1-218ENST00000530442 PTPRGP23470 1445 aa17.9■□□□□ 0.46
CAPN1-218ENST00000530442 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
CAPN1-218ENST00000530442 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-218ENST00000530442 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.46
CAPN1-218ENST00000530442 ABCA8O94911 1581 aa17.87■□□□□ 0.45
CAPN1-218ENST00000530442 ABCC2Q92887 1545 aa17.86■□□□□ 0.45
CAPN1-218ENST00000530442 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
CAPN1-218ENST00000530442 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-218ENST00000530442 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
CAPN1-218ENST00000530442 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
CAPN1-218ENST00000530442 UHRF1BP1LA0JNW5 1464 aa17.83■□□□□ 0.45
CAPN1-218ENST00000530442 UACAQ9BZF9 1416 aa17.83■□□□□ 0.45
CAPN1-218ENST00000530442 CLIP1P30622 1438 aa17.82■□□□□ 0.44
CAPN1-218ENST00000530442 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
CAPN1-218ENST00000530442 RAPGEF6Q8TEU7 1601 aa17.82■□□□□ 0.44
CAPN1-218ENST00000530442 ZCCHC11Q5TAX3 1644 aaKnown RBP17.78■□□□□ 0.44
CAPN1-218ENST00000530442 KDM5BQ9UGL1 1544 aa17.76■□□□□ 0.43
CAPN1-218ENST00000530442 MAPKBP1O60336 1514 aa17.75■□□□□ 0.43
CAPN1-218ENST00000530442 PCF11O94913 1555 aaKnown RBP17.74■□□□□ 0.43
CAPN1-218ENST00000530442 FMN1Q68DA7 1419 aa17.74■□□□□ 0.43
CAPN1-218ENST00000530442 NUP153P49790 1475 aaKnown RBP17.73■□□□□ 0.43
CAPN1-218ENST00000530442 HECW1Q76N89 1606 aa17.72■□□□□ 0.43
CAPN1-218ENST00000530442 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
CAPN1-218ENST00000530442 KIF13AQ9H1H9 1805 aa17.66■□□□□ 0.42
CAPN1-218ENST00000530442 ATP10BO94823 1461 aa17.66■□□□□ 0.42
CAPN1-218ENST00000530442 FYCO1Q9BQS8 1478 aa17.65■□□□□ 0.42
CAPN1-218ENST00000530442 DIP2BQ9P265 1576 aa17.65■□□□□ 0.42
CAPN1-218ENST00000530442 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.42
CAPN1-218ENST00000530442 CDK13Q14004 1512 aaKnown RBP17.64■□□□□ 0.41
CAPN1-218ENST00000530442 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.41
CAPN1-218ENST00000530442 ASXL2Q76L83 1435 aa17.64■□□□□ 0.41
CAPN1-218ENST00000530442 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
CAPN1-218ENST00000530442 ARID3CA6NKF2 412 aa17.62■□□□□ 0.41
CAPN1-218ENST00000530442 WDR7Q9Y4E6 1490 aa17.6■□□□□ 0.41
CAPN1-218ENST00000530442 ABCC10Q5T3U5 1492 aa17.59■□□□□ 0.41
CAPN1-218ENST00000530442 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
CAPN1-218ENST00000530442 CCDC18Q5T9S5 1454 aa17.57■□□□□ 0.4
CAPN1-218ENST00000530442 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
CAPN1-218ENST00000530442 GLI2P10070 1586 aa17.55■□□□□ 0.4
CAPN1-218ENST00000530442 MAP3K4Q9Y6R4 1608 aa17.52■□□□□ 0.4
CAPN1-218ENST00000530442 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-218ENST00000530442 MAGI3Q5TCQ9 1506 aa17.52■□□□□ 0.39
CAPN1-218ENST00000530442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-218ENST00000530442 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-218ENST00000530442 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
CAPN1-218ENST00000530442 PPRC1Q5VV67 1664 aaKnown RBP17.49■□□□□ 0.39
CAPN1-218ENST00000530442 ABCA9Q8IUA7 1624 aa17.49■□□□□ 0.39
CAPN1-218ENST00000530442 TIAM1Q13009 1591 aa17.48■□□□□ 0.39
CAPN1-218ENST00000530442 TSPOAP1O95153 1857 aa17.48■□□□□ 0.39
CAPN1-218ENST00000530442 KIF14Q15058 1648 aa17.47■□□□□ 0.39
CAPN1-218ENST00000530442 TTC37Q6PGP7 1564 aa17.46■□□□□ 0.39
CAPN1-218ENST00000530442 FAM69CQ0P6D2 419 aa17.46■□□□□ 0.39
CAPN1-218ENST00000530442 TROQ12816 1431 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-218ENST00000530442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.44■□□□□ 0.381e-9■■■■□ 24
CAPN1-218ENST00000530442 PLEKHD1A6NEE1 506 aa17.43■□□□□ 0.38
CAPN1-218ENST00000530442 EHBP1L1Q8N3D4 1523 aa17.42■□□□□ 0.38
CAPN1-218ENST00000530442 KCNH8Q96L42 1107 aa17.42■□□□□ 0.38
CAPN1-218ENST00000530442 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
CAPN1-218ENST00000530442 MYO5CQ9NQX4 1742 aa17.39■□□□□ 0.37
CAPN1-218ENST00000530442 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-218ENST00000530442 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
CAPN1-218ENST00000530442 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
CAPN1-218ENST00000530442 SUPT6HQ7KZ85 1726 aaKnown RBP17.35■□□□□ 0.37
CAPN1-218ENST00000530442 MTUS2Q5JR59 1369 aa17.35■□□□□ 0.37
CAPN1-218ENST00000530442 PREX2Q70Z35 1606 aa17.35■□□□□ 0.37
CAPN1-218ENST00000530442 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
CAPN1-218ENST00000530442 TEX14Q8IWB6 1497 aa17.33■□□□□ 0.37
CAPN1-218ENST00000530442 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.36
CAPN1-218ENST00000530442 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
CAPN1-218ENST00000530442 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
CAPN1-218ENST00000530442 ITSN2Q9NZM3 1697 aa17.29■□□□□ 0.36
CAPN1-218ENST00000530442 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
CAPN1-218ENST00000530442 PLCH2O75038 1416 aa17.28■□□□□ 0.36
CAPN1-218ENST00000530442 KDM6BO15054 1643 aa17.28■□□□□ 0.36
CAPN1-218ENST00000530442 KANK4Q5T7N3 995 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-218ENST00000530442 FANCAO15360 1455 aa17.26■□□□□ 0.35
CAPN1-218ENST00000530442 NEO1Q92859 1461 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms