RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CUL7Q14999 1698 aa36.42■■■■□ 3.42
TSPAN4-219ENST00000530404 KIF27Q86VH2 1401 aa36.38■■■■□ 3.41
TSPAN4-219ENST00000530404 IGF1RP08069 1367 aa36.36■■■■□ 3.41
TSPAN4-219ENST00000530404 KIAA0586Q9BVV6 1533 aa36.26■■■■□ 3.4
TSPAN4-219ENST00000530404 ADCY10Q96PN6 1610 aa36.24■■■■□ 3.39
TSPAN4-219ENST00000530404 CARMIL1Q5VZK9 1371 aa36.14■■■■□ 3.38
TSPAN4-219ENST00000530404 MAPKBP1O60336 1514 aa36.09■■■■□ 3.37
TSPAN4-219ENST00000530404 NPM1P06748 294 aaKnown RBP eCLIP36.08■■■■□ 3.37
TSPAN4-219ENST00000530404 DIP2BQ9P265 1576 aa36.06■■■■□ 3.36
TSPAN4-219ENST00000530404 ABCC10Q5T3U5 1492 aa36.05■■■■□ 3.36
TSPAN4-219ENST00000530404 AEBP2Q6ZN18 517 aaPredicted RBP36.05■■■■□ 3.36
TSPAN4-219ENST00000530404 TSPOAP1O95153 1857 aa36.03■■■■□ 3.36
TSPAN4-219ENST00000530404 FAM69CQ0P6D2 419 aa36.02■■■■□ 3.36
TSPAN4-219ENST00000530404 IQGAP2Q13576 1575 aa36.01■■■■□ 3.35
TSPAN4-219ENST00000530404 TTBK1Q5TCY1 1321 aaPredicted RBP36■■■■□ 3.35
TSPAN4-219ENST00000530404 PTPRGP23470 1445 aa35.93■■■■□ 3.34
TSPAN4-219ENST00000530404 CARMIL2Q6F5E8 1435 aa35.89■■■■□ 3.34
TSPAN4-219ENST00000530404 TNIKQ9UKE5 1360 aa35.87■■■■□ 3.33
TSPAN4-219ENST00000530404 RAPGEF2Q9Y4G8 1499 aa35.83■■■■□ 3.33
TSPAN4-219ENST00000530404 DISP1Q96F81 1524 aa35.81■■■■□ 3.32
TSPAN4-219ENST00000530404 ABCC2Q92887 1545 aa35.78■■■■□ 3.32
TSPAN4-219ENST00000530404 KDM6BO15054 1643 aa35.77■■■■□ 3.32
TSPAN4-219ENST00000530404 CTTNBP2Q8WZ74 1663 aa35.75■■■■□ 3.31
TSPAN4-219ENST00000530404 UGGT2Q9NYU1 1516 aa35.72■■■■□ 3.31
TSPAN4-219ENST00000530404 KIAA0556O60303 1618 aa35.71■■■■□ 3.31
TSPAN4-219ENST00000530404 UHRF1BP1LA0JNW5 1464 aa35.67■■■■□ 3.3
TSPAN4-219ENST00000530404 UACAQ9BZF9 1416 aa35.67■■■■□ 3.3
TSPAN4-219ENST00000530404 ASXL2Q76L83 1435 aa35.66■■■■□ 3.3
TSPAN4-219ENST00000530404 PPRC1Q5VV67 1664 aaKnown RBP35.66■■■■□ 3.3
TSPAN4-219ENST00000530404 ZCCHC11Q5TAX3 1644 aaKnown RBP35.62■■■■□ 3.29
TSPAN4-219ENST00000530404 PLB1Q6P1J6 1458 aa35.6■■■■□ 3.29
TSPAN4-219ENST00000530404 GLI2P10070 1586 aa35.58■■■■□ 3.29
TSPAN4-219ENST00000530404 KDM5BQ9UGL1 1544 aa35.54■■■■□ 3.28
TSPAN4-219ENST00000530404 MAP3K4Q9Y6R4 1608 aa35.48■■■■□ 3.27
TSPAN4-219ENST00000530404 EPRSP07814 1512 aaKnown RBP35.47■■■■□ 3.27
TSPAN4-219ENST00000530404 PRXQ9BXM0 1461 aa35.43■■■■□ 3.26
TSPAN4-219ENST00000530404 GOLGA3Q08378 1498 aa35.38■■■■□ 3.25
TSPAN4-219ENST00000530404 ABCA8O94911 1581 aa35.34■■■■□ 3.25
TSPAN4-219ENST00000530404 KDM4FA0A1W2PPD8 638 aa35.34■■■■□ 3.25
TSPAN4-219ENST00000530404 WDR7Q9Y4E6 1490 aa35.31■■■■□ 3.24
TSPAN4-219ENST00000530404 COL17A1Q9UMD9 1497 aaPredicted RBP35.29■■■■□ 3.24
TSPAN4-219ENST00000530404 TEX14Q8IWB6 1497 aa35.25■■■■□ 3.23
TSPAN4-219ENST00000530404 CFAP43Q8NDM7 1665 aa35.22■■■■□ 3.23
TSPAN4-219ENST00000530404 P3H3Q8IVL6 736 aa35.18■■■■□ 3.22
TSPAN4-219ENST00000530404 KCNH8Q96L42 1107 aa35.15■■■■□ 3.22
TSPAN4-219ENST00000530404 ARID3CA6NKF2 412 aa35.11■■■■□ 3.21
TSPAN4-219ENST00000530404 CSRNP3Q8WYN3 585 aa35.11■■■■□ 3.21
TSPAN4-219ENST00000530404 SAMD9Q5K651 1589 aa35.11■■■■□ 3.21
TSPAN4-219ENST00000530404 ADGRL1O94910 1474 aa35.09■■■■□ 3.21
TSPAN4-219ENST00000530404 CD109Q6YHK3 1445 aa35.09■■■■□ 3.21
TSPAN4-219ENST00000530404 MAGI3Q5TCQ9 1506 aa35.05■■■■□ 3.2
TSPAN4-219ENST00000530404 RAPGEF6Q8TEU7 1601 aa35.02■■■■□ 3.2
TSPAN4-219ENST00000530404 ATP10BO94823 1461 aa35.02■■■■□ 3.2
TSPAN4-219ENST00000530404 RANGAP1P46060 587 aaPredicted RBP34.95■■■■□ 3.19
TSPAN4-219ENST00000530404 FAM9AQ8IZU1 332 aaPredicted RBP34.94■■■■□ 3.18
TSPAN4-219ENST00000530404 EEA1Q15075 1411 aa34.93■■■■□ 3.18
TSPAN4-219ENST00000530404 ABCA9Q8IUA7 1624 aa34.9■■■■□ 3.18
TSPAN4-219ENST00000530404 KIF21BO75037 1637 aa34.87■■■■□ 3.17
TSPAN4-219ENST00000530404 FHOD3Q2V2M9 1422 aa34.86■■■■□ 3.17
TSPAN4-219ENST00000530404 NUP153P49790 1475 aaKnown RBP34.81■■■■□ 3.16
TSPAN4-219ENST00000530404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.8■■■■□ 3.16
TSPAN4-219ENST00000530404 HNRNPUL2Q1KMD3 747 aaKnown RBP34.8■■■■□ 3.16
TSPAN4-219ENST00000530404 ARAP3Q8WWN8 1544 aa34.78■■■■□ 3.16
TSPAN4-219ENST00000530404 EFCAB5A4FU69 1503 aa34.68■■■■□ 3.14
TSPAN4-219ENST00000530404 HECW2Q9P2P5 1572 aa34.68■■■■□ 3.14
TSPAN4-219ENST00000530404 EHMT2Q96KQ7 1210 aa34.66■■■■□ 3.14
TSPAN4-219ENST00000530404 FRMPD1Q5SYB0 1578 aa34.62■■■■□ 3.13
TSPAN4-219ENST00000530404 NEO1Q92859 1461 aa34.62■■■■□ 3.13
TSPAN4-219ENST00000530404 RAPGEF3O95398 923 aa34.6■■■■□ 3.13
TSPAN4-219ENST00000530404 PHLDB1Q86UU1 1377 aa34.6■■■■□ 3.13
TSPAN4-219ENST00000530404 CDK13Q14004 1512 aaKnown RBP34.55■■■■□ 3.12
TSPAN4-219ENST00000530404 TTC37Q6PGP7 1564 aa34.54■■■■□ 3.12
TSPAN4-219ENST00000530404 PLEKHD1A6NEE1 506 aa34.54■■■■□ 3.12
TSPAN4-219ENST00000530404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.54■■■■□ 3.12
TSPAN4-219ENST00000530404 RICTORQ6R327 1708 aa34.53■■■■□ 3.12
TSPAN4-219ENST00000530404 ADAMTSL3P82987 1691 aa34.51■■■■□ 3.12
TSPAN4-219ENST00000530404 CFAP74Q9C0B2 1584 aa34.49■■■■□ 3.11
TSPAN4-219ENST00000530404 UBTFP17480 764 aaKnown RBP34.48■■■■□ 3.11
TSPAN4-219ENST00000530404 CHIC1Q5VXU3 224 aa34.47■■■■□ 3.11
TSPAN4-219ENST00000530404 BCORL1Q5H9F3 1711 aa34.47■■■■□ 3.11
TSPAN4-219ENST00000530404 FANCAO15360 1455 aa34.43■■■■□ 3.1
TSPAN4-219ENST00000530404 AKNAQ7Z591 1439 aa34.42■■■■□ 3.1
TSPAN4-219ENST00000530404 HECW1Q76N89 1606 aa34.41■■■■□ 3.1
TSPAN4-219ENST00000530404 ARHGEF40Q8TER5 1519 aa34.4■■■■□ 3.1
TSPAN4-219ENST00000530404 ARHGAP35Q9NRY4 1499 aa34.4■■■■□ 3.1
TSPAN4-219ENST00000530404 DENND4BO75064 1496 aaPredicted RBP34.39■■■■□ 3.1
TSPAN4-219ENST00000530404 MADDQ8WXG6 1647 aa34.39■■■■□ 3.1
TSPAN4-219ENST00000530404 LRRIQ1Q96JM4 1722 aa34.38■■■■□ 3.09
TSPAN4-219ENST00000530404 ATP1B4Q9UN42 357 aaPredicted RBP34.37■■■■□ 3.09
TSPAN4-219ENST00000530404 PTPRMP28827 1452 aa34.35■■■■□ 3.09
TSPAN4-219ENST00000530404 MYO5CQ9NQX4 1742 aa34.34■■■■□ 3.09
TSPAN4-219ENST00000530404 ARID4BQ4LE39 1312 aaPredicted RBP34.33■■■■□ 3.09
TSPAN4-219ENST00000530404 SIGLEC1Q9BZZ2 1709 aa34.33■■■■□ 3.09
TSPAN4-219ENST00000530404 FMN1Q68DA7 1419 aa34.32■■■■□ 3.08
TSPAN4-219ENST00000530404 ILDR1Q86SU0 546 aaPredicted RBP34.32■■■■□ 3.08
TSPAN4-219ENST00000530404 RIMS1Q86UR5 1692 aaKnown RBP34.31■■■■□ 3.08
TSPAN4-219ENST00000530404 KIF14Q15058 1648 aa34.29■■■■□ 3.08
TSPAN4-219ENST00000530404 ZMYM4Q5VZL5 1548 aa34.28■■■■□ 3.08
TSPAN4-219ENST00000530404 ZFYVE16Q7Z3T8 1539 aa34.24■■■■□ 3.07
TSPAN4-219ENST00000530404 PLCH2O75038 1416 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms