RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
SOX6-213ENST00000530378 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
SOX6-213ENST00000530378 CTTNBP2Q8WZ74 1663 aa17.29■□□□□ 0.36
SOX6-213ENST00000530378 RANGAP1P46060 587 aaPredicted RBP17.28■□□□□ 0.36
SOX6-213ENST00000530378 CEP170Q5SW79 1584 aa17.26■□□□□ 0.35
SOX6-213ENST00000530378 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
SOX6-213ENST00000530378 NUP160Q12769 1436 aa17.18■□□□□ 0.34
SOX6-213ENST00000530378 IQGAP2Q13576 1575 aa17.18■□□□□ 0.34
SOX6-213ENST00000530378 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
SOX6-213ENST00000530378 KIAA0586Q9BVV6 1533 aa17.13■□□□□ 0.33
SOX6-213ENST00000530378 CLIP1P30622 1438 aa17.11■□□□□ 0.33
SOX6-213ENST00000530378 CLASP1Q7Z460 1538 aa17.1■□□□□ 0.33
SOX6-213ENST00000530378 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
SOX6-213ENST00000530378 ARHGAP35Q9NRY4 1499 aa17.05■□□□□ 0.32
SOX6-213ENST00000530378 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
SOX6-213ENST00000530378 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
SOX6-213ENST00000530378 UGGT2Q9NYU1 1516 aa17.04■□□□□ 0.32
SOX6-213ENST00000530378 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
SOX6-213ENST00000530378 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
SOX6-213ENST00000530378 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.32
SOX6-213ENST00000530378 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
SOX6-213ENST00000530378 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
SOX6-213ENST00000530378 ERCC6L2Q5T890 1561 aa17.01■□□□□ 0.31
SOX6-213ENST00000530378 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
SOX6-213ENST00000530378 JPH4Q96JJ6 628 aa17.01■□□□□ 0.31
SOX6-213ENST00000530378 DISP1Q96F81 1524 aa17■□□□□ 0.31
SOX6-213ENST00000530378 PRG4Q92954 1404 aaPredicted RBP17■□□□□ 0.31
SOX6-213ENST00000530378 CARMIL2Q6F5E8 1435 aa16.93■□□□□ 0.3
SOX6-213ENST00000530378 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.29
SOX6-213ENST00000530378 VPS8Q8N3P4 1428 aa16.88■□□□□ 0.29
SOX6-213ENST00000530378 ARHGEF11O15085 1522 aa16.85■□□□□ 0.29
SOX6-213ENST00000530378 ATP1B4Q9UN42 357 aaPredicted RBP16.85■□□□□ 0.29
SOX6-213ENST00000530378 RIMBP3CA6NJZ7 1639 aa16.83■□□□□ 0.29
SOX6-213ENST00000530378 RIMBP3BA6NNM3 1639 aa16.83■□□□□ 0.29
SOX6-213ENST00000530378 RIMBP3Q9UFD9 1639 aa16.83■□□□□ 0.29
SOX6-213ENST00000530378 FMN1Q68DA7 1419 aa16.83■□□□□ 0.29
SOX6-213ENST00000530378 ARID3CA6NKF2 412 aa16.82■□□□□ 0.28
SOX6-213ENST00000530378 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
SOX6-213ENST00000530378 FOXD1Q16676 465 aa16.82■□□□□ 0.28
SOX6-213ENST00000530378 PTPRGP23470 1445 aa16.81■□□□□ 0.28
SOX6-213ENST00000530378 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
SOX6-213ENST00000530378 RAPGEF6Q8TEU7 1601 aa16.81■□□□□ 0.28
SOX6-213ENST00000530378 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
SOX6-213ENST00000530378 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.28
SOX6-213ENST00000530378 CASKIN1Q8WXD9 1431 aa16.77■□□□□ 0.28
SOX6-213ENST00000530378 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
SOX6-213ENST00000530378 ABCA8O94911 1581 aa16.76■□□□□ 0.27
SOX6-213ENST00000530378 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
SOX6-213ENST00000530378 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
SOX6-213ENST00000530378 CFAP43Q8NDM7 1665 aa16.72■□□□□ 0.27
SOX6-213ENST00000530378 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
SOX6-213ENST00000530378 ADCY10Q96PN6 1610 aa16.71■□□□□ 0.27
SOX6-213ENST00000530378 ABCC2Q92887 1545 aa16.71■□□□□ 0.26
SOX6-213ENST00000530378 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
SOX6-213ENST00000530378 APLP2Q06481 763 aa16.69■□□□□ 0.26
SOX6-213ENST00000530378 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
SOX6-213ENST00000530378 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
SOX6-213ENST00000530378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
SOX6-213ENST00000530378 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
SOX6-213ENST00000530378 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
SOX6-213ENST00000530378 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
SOX6-213ENST00000530378 ZCCHC11Q5TAX3 1644 aaKnown RBP16.65■□□□□ 0.26
SOX6-213ENST00000530378 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
SOX6-213ENST00000530378 MAGI3Q5TCQ9 1506 aa16.62■□□□□ 0.25
SOX6-213ENST00000530378 UHRF1BP1LA0JNW5 1464 aa16.62■□□□□ 0.25
SOX6-213ENST00000530378 ATP10BO94823 1461 aa16.62■□□□□ 0.25
SOX6-213ENST00000530378 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
SOX6-213ENST00000530378 MAP3K1Q13233 1512 aa16.58■□□□□ 0.24
SOX6-213ENST00000530378 KDM5BQ9UGL1 1544 aa16.58■□□□□ 0.24
SOX6-213ENST00000530378 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
SOX6-213ENST00000530378 EHBP1L1Q8N3D4 1523 aa16.55■□□□□ 0.24
SOX6-213ENST00000530378 KIF14Q15058 1648 aa16.54■□□□□ 0.24
SOX6-213ENST00000530378 SUPT6HQ7KZ85 1726 aaKnown RBP16.52■□□□□ 0.23
SOX6-213ENST00000530378 TROQ12816 1431 aaPredicted RBP16.5■□□□□ 0.23
SOX6-213ENST00000530378 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
SOX6-213ENST00000530378 CDK11AQ9UQ88 783 aaPredicted RBP16.49■□□□□ 0.23
SOX6-213ENST00000530378 PLEKHD1A6NEE1 506 aa16.49■□□□□ 0.23
SOX6-213ENST00000530378 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
SOX6-213ENST00000530378 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
SOX6-213ENST00000530378 KCNH8Q96L42 1107 aa16.48■□□□□ 0.23
SOX6-213ENST00000530378 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
SOX6-213ENST00000530378 WDR7Q9Y4E6 1490 aa16.47■□□□□ 0.23
SOX6-213ENST00000530378 TTC37Q6PGP7 1564 aa16.45■□□□□ 0.22
SOX6-213ENST00000530378 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
SOX6-213ENST00000530378 MAPKBP1O60336 1514 aa16.42■□□□□ 0.22
SOX6-213ENST00000530378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
SOX6-213ENST00000530378 CDC42BPAQ5VT25 1732 aa16.4■□□□□ 0.22
SOX6-213ENST00000530378 ABCC10Q5T3U5 1492 aa16.39■□□□□ 0.21
SOX6-213ENST00000530378 CCNB3Q8WWL7 1395 aa16.38■□□□□ 0.21
SOX6-213ENST00000530378 MYO5CQ9NQX4 1742 aa16.37■□□□□ 0.21
SOX6-213ENST00000530378 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
SOX6-213ENST00000530378 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
SOX6-213ENST00000530378 PREX2Q70Z35 1606 aa16.35■□□□□ 0.21
SOX6-213ENST00000530378 ABCA9Q8IUA7 1624 aa16.35■□□□□ 0.21
SOX6-213ENST00000530378 DIP2BQ9P265 1576 aa16.34■□□□□ 0.21
SOX6-213ENST00000530378 CDC42BPBQ9Y5S2 1711 aa16.34■□□□□ 0.21
SOX6-213ENST00000530378 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.21
SOX6-213ENST00000530378 GPATCH8Q9UKJ3 1502 aaKnown RBP16.33■□□□□ 0.2
SOX6-213ENST00000530378 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.2
SOX6-213ENST00000530378 TSPOAP1O95153 1857 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms