RNA–Protein interactions for RNA: ENST00000529878.1

SCN4B-204, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4 BASIC

Gene SCN4B, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-204ENST00000529878 IGF1RP08069 1367 aa26.97■■□□□ 1.91
SCN4B-204ENST00000529878 NPM1P06748 294 aaKnown RBP eCLIP26.94■■□□□ 1.9
SCN4B-204ENST00000529878 CUL7Q14999 1698 aa26.92■■□□□ 1.9
SCN4B-204ENST00000529878 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.89
SCN4B-204ENST00000529878 FAM69CQ0P6D2 419 aa26.86■■□□□ 1.89
SCN4B-204ENST00000529878 KIF13AQ9H1H9 1805 aa26.82■■□□□ 1.88
SCN4B-204ENST00000529878 CARMIL1Q5VZK9 1371 aa26.81■■□□□ 1.88
SCN4B-204ENST00000529878 ABCC10Q5T3U5 1492 aa26.78■■□□□ 1.88
SCN4B-204ENST00000529878 KIAA0586Q9BVV6 1533 aa26.73■■□□□ 1.87
SCN4B-204ENST00000529878 MAPKBP1O60336 1514 aa26.71■■□□□ 1.87
SCN4B-204ENST00000529878 RAPGEF2Q9Y4G8 1499 aa26.62■■□□□ 1.85
SCN4B-204ENST00000529878 ADCY10Q96PN6 1610 aa26.62■■□□□ 1.85
SCN4B-204ENST00000529878 DIP2BQ9P265 1576 aa26.59■■□□□ 1.85
SCN4B-204ENST00000529878 PTPRGP23470 1445 aa26.58■■□□□ 1.85
SCN4B-204ENST00000529878 IQGAP2Q13576 1575 aa26.58■■□□□ 1.85
SCN4B-204ENST00000529878 CARMIL2Q6F5E8 1435 aa26.51■■□□□ 1.83
SCN4B-204ENST00000529878 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
SCN4B-204ENST00000529878 EEA1Q15075 1411 aa26.49■■□□□ 1.83
SCN4B-204ENST00000529878 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
SCN4B-204ENST00000529878 KDM4FA0A1W2PPD8 638 aa26.49■■□□□ 1.83
SCN4B-204ENST00000529878 KDM6BO15054 1643 aa26.48■■□□□ 1.83
SCN4B-204ENST00000529878 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
SCN4B-204ENST00000529878 CHIC1Q5VXU3 224 aa26.45■■□□□ 1.82
SCN4B-204ENST00000529878 CTTNBP2Q8WZ74 1663 aa26.44■■□□□ 1.82
SCN4B-204ENST00000529878 TSPOAP1O95153 1857 aa26.44■■□□□ 1.82
SCN4B-204ENST00000529878 DISP1Q96F81 1524 aa26.42■■□□□ 1.82
SCN4B-204ENST00000529878 ABCC2Q92887 1545 aa26.41■■□□□ 1.82
SCN4B-204ENST00000529878 UGGT2Q9NYU1 1516 aa26.39■■□□□ 1.82
SCN4B-204ENST00000529878 PLB1Q6P1J6 1458 aa26.39■■□□□ 1.82
SCN4B-204ENST00000529878 ASXL2Q76L83 1435 aa26.37■■□□□ 1.81
SCN4B-204ENST00000529878 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
SCN4B-204ENST00000529878 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
SCN4B-204ENST00000529878 KIAA0556O60303 1618 aa26.35■■□□□ 1.81
SCN4B-204ENST00000529878 UHRF1BP1LA0JNW5 1464 aa26.35■■□□□ 1.81
SCN4B-204ENST00000529878 UACAQ9BZF9 1416 aa26.33■■□□□ 1.81
SCN4B-204ENST00000529878 GLI2P10070 1586 aa26.32■■□□□ 1.8
SCN4B-204ENST00000529878 KIF21BO75037 1637 aa26.25■■□□□ 1.79
SCN4B-204ENST00000529878 KDM5BQ9UGL1 1544 aa26.22■■□□□ 1.79
SCN4B-204ENST00000529878 GOLGA3Q08378 1498 aa26.2■■□□□ 1.78
SCN4B-204ENST00000529878 EPRSP07814 1512 aaKnown RBP26.19■■□□□ 1.78
SCN4B-204ENST00000529878 PPRC1Q5VV67 1664 aaKnown RBP26.18■■□□□ 1.78
SCN4B-204ENST00000529878 TEX14Q8IWB6 1497 aa26.15■■□□□ 1.78
SCN4B-204ENST00000529878 COL17A1Q9UMD9 1497 aaPredicted RBP26.14■■□□□ 1.78
SCN4B-204ENST00000529878 P3H3Q8IVL6 736 aa26.12■■□□□ 1.77
SCN4B-204ENST00000529878 EHMT2Q96KQ7 1210 aa26.12■■□□□ 1.77
SCN4B-204ENST00000529878 RANGAP1P46060 587 aaPredicted RBP26.11■■□□□ 1.77
SCN4B-204ENST00000529878 ADGRL1O94910 1474 aa26.1■■□□□ 1.77
SCN4B-204ENST00000529878 ZCCHC11Q5TAX3 1644 aaKnown RBP26.1■■□□□ 1.77
SCN4B-204ENST00000529878 MAP3K4Q9Y6R4 1608 aa26.1■■□□□ 1.77
SCN4B-204ENST00000529878 SAMD9Q5K651 1589 aa26.06■■□□□ 1.76
SCN4B-204ENST00000529878 ABCA8O94911 1581 aa26.05■■□□□ 1.76
SCN4B-204ENST00000529878 WDR7Q9Y4E6 1490 aa26.04■■□□□ 1.76
SCN4B-204ENST00000529878 ILDR1Q86SU0 546 aaPredicted RBP26.03■■□□□ 1.76
SCN4B-204ENST00000529878 KCNH8Q96L42 1107 aa26.02■■□□□ 1.76
SCN4B-204ENST00000529878 CD109Q6YHK3 1445 aa25.97■■□□□ 1.75
SCN4B-204ENST00000529878 ARID3CA6NKF2 412 aa25.97■■□□□ 1.75
SCN4B-204ENST00000529878 FHOD3Q2V2M9 1422 aa25.95■■□□□ 1.74
SCN4B-204ENST00000529878 MAGI3Q5TCQ9 1506 aa25.94■■□□□ 1.74
SCN4B-204ENST00000529878 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
SCN4B-204ENST00000529878 EFCAB5A4FU69 1503 aa25.92■■□□□ 1.74
SCN4B-204ENST00000529878 RAPGEF6Q8TEU7 1601 aa25.88■■□□□ 1.73
SCN4B-204ENST00000529878 CFAP43Q8NDM7 1665 aa25.87■■□□□ 1.73
SCN4B-204ENST00000529878 ATP10BO94823 1461 aa25.83■■□□□ 1.73
SCN4B-204ENST00000529878 HECW2Q9P2P5 1572 aa25.81■■□□□ 1.72
SCN4B-204ENST00000529878 NUP153P49790 1475 aaKnown RBP25.79■■□□□ 1.72
SCN4B-204ENST00000529878 PHLDB1Q86UU1 1377 aa25.78■■□□□ 1.72
SCN4B-204ENST00000529878 ARAP3Q8WWN8 1544 aa25.76■■□□□ 1.71
SCN4B-204ENST00000529878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.75■■□□□ 1.71
SCN4B-204ENST00000529878 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
SCN4B-204ENST00000529878 ARHGAP35Q9NRY4 1499 aa25.73■■□□□ 1.71
SCN4B-204ENST00000529878 RAPGEF3O95398 923 aa25.64■■□□□ 1.7
SCN4B-204ENST00000529878 CDK13Q14004 1512 aaKnown RBP25.63■■□□□ 1.69
SCN4B-204ENST00000529878 FMN1Q68DA7 1419 aa25.63■■□□□ 1.69
SCN4B-204ENST00000529878 ATP1B4Q9UN42 357 aaPredicted RBP25.61■■□□□ 1.69
SCN4B-204ENST00000529878 ABCA9Q8IUA7 1624 aa25.61■■□□□ 1.69
SCN4B-204ENST00000529878 NEO1Q92859 1461 aa25.59■■□□□ 1.69
SCN4B-204ENST00000529878 HECW1Q76N89 1606 aa25.57■■□□□ 1.68
SCN4B-204ENST00000529878 PLEKHD1A6NEE1 506 aa25.55■■□□□ 1.68
SCN4B-204ENST00000529878 ARID4BQ4LE39 1312 aaPredicted RBP25.54■■□□□ 1.68
SCN4B-204ENST00000529878 PTPRMP28827 1452 aa25.53■■□□□ 1.68
SCN4B-204ENST00000529878 CLIP1P30622 1438 aa25.52■■□□□ 1.68
SCN4B-204ENST00000529878 FBXO41Q8TF61 875 aa25.51■■□□□ 1.67
SCN4B-204ENST00000529878 ADAMTSL3P82987 1691 aa25.5■■□□□ 1.67
SCN4B-204ENST00000529878 PCF11O94913 1555 aaKnown RBP25.48■■□□□ 1.67
SCN4B-204ENST00000529878 LRRIQ1Q96JM4 1722 aa25.48■■□□□ 1.67
SCN4B-204ENST00000529878 TTC37Q6PGP7 1564 aa25.48■■□□□ 1.67
SCN4B-204ENST00000529878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
SCN4B-204ENST00000529878 DENND4BO75064 1496 aaPredicted RBP25.41■■□□□ 1.66
SCN4B-204ENST00000529878 CASKIN1Q8WXD9 1431 aa25.41■■□□□ 1.66
SCN4B-204ENST00000529878 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
SCN4B-204ENST00000529878 AKNAQ7Z591 1439 aa25.4■■□□□ 1.66
SCN4B-204ENST00000529878 BCORL1Q5H9F3 1711 aa25.4■■□□□ 1.66
SCN4B-204ENST00000529878 FYCO1Q9BQS8 1478 aa25.38■■□□□ 1.65
SCN4B-204ENST00000529878 KIF14Q15058 1648 aa25.37■■□□□ 1.65
SCN4B-204ENST00000529878 FRMPD1Q5SYB0 1578 aa25.37■■□□□ 1.65
SCN4B-204ENST00000529878 CCDC18Q5T9S5 1454 aa25.35■■□□□ 1.65
SCN4B-204ENST00000529878 FANCAO15360 1455 aa25.34■■□□□ 1.65
SCN4B-204ENST00000529878 CDK11AQ9UQ88 783 aaPredicted RBP25.34■■□□□ 1.65
SCN4B-204ENST00000529878 TROQ12816 1431 aaPredicted RBP25.33■■□□□ 1.65
SCN4B-204ENST00000529878 POGZQ7Z3K3 1410 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms