RNA–Protein interactions for RNA: ENST00000529464.5

FDFT1-215, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-215ENST00000529464 KIF27Q86VH2 1401 aa24.95■■□□□ 1.58
FDFT1-215ENST00000529464 KIAA0586Q9BVV6 1533 aa24.84■■□□□ 1.57
FDFT1-215ENST00000529464 CUL7Q14999 1698 aa24.81■■□□□ 1.56
FDFT1-215ENST00000529464 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
FDFT1-215ENST00000529464 ADCY10Q96PN6 1610 aa24.72■■□□□ 1.55
FDFT1-215ENST00000529464 NPM1P06748 294 aaKnown RBP eCLIP24.71■■□□□ 1.55
FDFT1-215ENST00000529464 TTBK1Q5TCY1 1321 aaPredicted RBP24.69■■□□□ 1.54
FDFT1-215ENST00000529464 KIF13AQ9H1H9 1805 aa24.69■■□□□ 1.54
FDFT1-215ENST00000529464 FAM69CQ0P6D2 419 aa24.68■■□□□ 1.54
FDFT1-215ENST00000529464 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
FDFT1-215ENST00000529464 MAPKBP1O60336 1514 aa24.65■■□□□ 1.54
FDFT1-215ENST00000529464 PTPRGP23470 1445 aa24.64■■□□□ 1.54
FDFT1-215ENST00000529464 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
FDFT1-215ENST00000529464 IQGAP2Q13576 1575 aa24.59■■□□□ 1.53
FDFT1-215ENST00000529464 DIP2BQ9P265 1576 aa24.59■■□□□ 1.53
FDFT1-215ENST00000529464 TNIKQ9UKE5 1360 aa24.58■■□□□ 1.53
FDFT1-215ENST00000529464 CARMIL2Q6F5E8 1435 aa24.58■■□□□ 1.53
FDFT1-215ENST00000529464 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
FDFT1-215ENST00000529464 DISP1Q96F81 1524 aa24.52■■□□□ 1.52
FDFT1-215ENST00000529464 ABCC2Q92887 1545 aa24.49■■□□□ 1.51
FDFT1-215ENST00000529464 UGGT2Q9NYU1 1516 aa24.45■■□□□ 1.5
FDFT1-215ENST00000529464 UACAQ9BZF9 1416 aa24.44■■□□□ 1.5
FDFT1-215ENST00000529464 ASXL2Q76L83 1435 aa24.43■■□□□ 1.5
FDFT1-215ENST00000529464 UHRF1BP1LA0JNW5 1464 aa24.42■■□□□ 1.5
FDFT1-215ENST00000529464 KIAA0556O60303 1618 aa24.39■■□□□ 1.49
FDFT1-215ENST00000529464 PLB1Q6P1J6 1458 aa24.37■■□□□ 1.49
FDFT1-215ENST00000529464 TSPOAP1O95153 1857 aa24.36■■□□□ 1.49
FDFT1-215ENST00000529464 KDM6BO15054 1643 aa24.36■■□□□ 1.49
FDFT1-215ENST00000529464 KDM5BQ9UGL1 1544 aa24.32■■□□□ 1.48
FDFT1-215ENST00000529464 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
FDFT1-215ENST00000529464 GLI2P10070 1586 aa24.29■■□□□ 1.48
FDFT1-215ENST00000529464 EPRSP07814 1512 aaKnown RBP24.27■■□□□ 1.48
FDFT1-215ENST00000529464 ZCCHC11Q5TAX3 1644 aaKnown RBP24.26■■□□□ 1.47
FDFT1-215ENST00000529464 CTTNBP2Q8WZ74 1663 aa24.26■■□□□ 1.47
FDFT1-215ENST00000529464 PPRC1Q5VV67 1664 aaKnown RBP24.25■■□□□ 1.47
FDFT1-215ENST00000529464 GOLGA3Q08378 1498 aa24.22■■□□□ 1.47
FDFT1-215ENST00000529464 KDM4FA0A1W2PPD8 638 aa24.2■■□□□ 1.46
FDFT1-215ENST00000529464 COL17A1Q9UMD9 1497 aaPredicted RBP24.18■■□□□ 1.46
FDFT1-215ENST00000529464 WDR7Q9Y4E6 1490 aa24.17■■□□□ 1.46
FDFT1-215ENST00000529464 ABCA8O94911 1581 aa24.16■■□□□ 1.46
FDFT1-215ENST00000529464 MAP3K4Q9Y6R4 1608 aa24.16■■□□□ 1.46
FDFT1-215ENST00000529464 P3H3Q8IVL6 736 aa24.15■■□□□ 1.46
FDFT1-215ENST00000529464 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
FDFT1-215ENST00000529464 ARID3CA6NKF2 412 aa24.11■■□□□ 1.45
FDFT1-215ENST00000529464 KCNH8Q96L42 1107 aa24.1■■□□□ 1.45
FDFT1-215ENST00000529464 TEX14Q8IWB6 1497 aa24.09■■□□□ 1.45
FDFT1-215ENST00000529464 FAM9AQ8IZU1 332 aaPredicted RBP24.03■■□□□ 1.44
FDFT1-215ENST00000529464 CD109Q6YHK3 1445 aa24.02■■□□□ 1.44
FDFT1-215ENST00000529464 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
FDFT1-215ENST00000529464 ATP10BO94823 1461 aa24■■□□□ 1.43
FDFT1-215ENST00000529464 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
FDFT1-215ENST00000529464 ADGRL1O94910 1474 aa23.98■■□□□ 1.43
FDFT1-215ENST00000529464 MAGI3Q5TCQ9 1506 aa23.98■■□□□ 1.43
FDFT1-215ENST00000529464 EEA1Q15075 1411 aa23.96■■□□□ 1.43
FDFT1-215ENST00000529464 CFAP43Q8NDM7 1665 aa23.95■■□□□ 1.42
FDFT1-215ENST00000529464 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
FDFT1-215ENST00000529464 RAPGEF6Q8TEU7 1601 aa23.88■■□□□ 1.41
FDFT1-215ENST00000529464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
FDFT1-215ENST00000529464 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
FDFT1-215ENST00000529464 NUP153P49790 1475 aaKnown RBP23.86■■□□□ 1.41
FDFT1-215ENST00000529464 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.41
FDFT1-215ENST00000529464 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
FDFT1-215ENST00000529464 KIF21BO75037 1637 aa23.79■■□□□ 1.4
FDFT1-215ENST00000529464 ARAP3Q8WWN8 1544 aa23.79■■□□□ 1.4
FDFT1-215ENST00000529464 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
FDFT1-215ENST00000529464 RAPGEF3O95398 923 aa23.73■■□□□ 1.39
FDFT1-215ENST00000529464 EFCAB5A4FU69 1503 aa23.73■■□□□ 1.39
FDFT1-215ENST00000529464 NEO1Q92859 1461 aa23.69■■□□□ 1.38
FDFT1-215ENST00000529464 PHLDB1Q86UU1 1377 aa23.69■■□□□ 1.38
FDFT1-215ENST00000529464 PLEKHD1A6NEE1 506 aa23.69■■□□□ 1.38
FDFT1-215ENST00000529464 UBTFP17480 764 aaKnown RBP23.69■■□□□ 1.38
FDFT1-215ENST00000529464 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
FDFT1-215ENST00000529464 FRMPD1Q5SYB0 1578 aa23.64■■□□□ 1.37
FDFT1-215ENST00000529464 HECW2Q9P2P5 1572 aa23.64■■□□□ 1.37
FDFT1-215ENST00000529464 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.61■■□□□ 1.372e-6■□□□□ 10
FDFT1-215ENST00000529464 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
FDFT1-215ENST00000529464 ATP1B4Q9UN42 357 aaPredicted RBP23.59■■□□□ 1.37
FDFT1-215ENST00000529464 TTC37Q6PGP7 1564 aa23.59■■□□□ 1.37
FDFT1-215ENST00000529464 FANCAO15360 1455 aa23.57■■□□□ 1.36
FDFT1-215ENST00000529464 AKNAQ7Z591 1439 aa23.57■■□□□ 1.36
FDFT1-215ENST00000529464 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
FDFT1-215ENST00000529464 FMN1Q68DA7 1419 aa23.53■■□□□ 1.36
FDFT1-215ENST00000529464 ARID4BQ4LE39 1312 aaPredicted RBP23.53■■□□□ 1.36
FDFT1-215ENST00000529464 ADAMTSL3P82987 1691 aa23.5■■□□□ 1.35
FDFT1-215ENST00000529464 PTPRMP28827 1452 aa23.49■■□□□ 1.35
FDFT1-215ENST00000529464 HECW1Q76N89 1606 aa23.49■■□□□ 1.35
FDFT1-215ENST00000529464 ARHGEF40Q8TER5 1519 aa23.49■■□□□ 1.35
FDFT1-215ENST00000529464 RICTORQ6R327 1708 aa23.47■■□□□ 1.35
FDFT1-215ENST00000529464 CFAP74Q9C0B2 1584 aa23.47■■□□□ 1.35
FDFT1-215ENST00000529464 PLCH2O75038 1416 aa23.46■■□□□ 1.35
FDFT1-215ENST00000529464 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
FDFT1-215ENST00000529464 YEATS2Q9ULM3 1422 aa23.45■■□□□ 1.34
FDFT1-215ENST00000529464 BCORL1Q5H9F3 1711 aa23.44■■□□□ 1.34
FDFT1-215ENST00000529464 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
FDFT1-215ENST00000529464 SCAPERQ9BY12 1400 aa23.42■■□□□ 1.34
FDFT1-215ENST00000529464 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
FDFT1-215ENST00000529464 KIF14Q15058 1648 aa23.41■■□□□ 1.34
FDFT1-215ENST00000529464 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
FDFT1-215ENST00000529464 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
FDFT1-215ENST00000529464 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms