RNA–Protein interactions for RNA: ENST00000529464.5

FDFT1-215, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-215ENST00000529464 NISCHQ9Y2I1 1504 aa35.7■■■■□ 3.31
FDFT1-215ENST00000529464 ABCC9O60706 1549 aa32.05■■■□□ 2.72
FDFT1-215ENST00000529464 CCDC180Q9P1Z9 1646 aa31.91■■■□□ 2.7
FDFT1-215ENST00000529464 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
FDFT1-215ENST00000529464 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
FDFT1-215ENST00000529464 NACADO15069 1562 aa30.2■■■□□ 2.42
FDFT1-215ENST00000529464 DNAJC5BQ9UF47 199 aa30.08■■■□□ 2.41
FDFT1-215ENST00000529464 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.38
FDFT1-215ENST00000529464 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.36
FDFT1-215ENST00000529464 UNC13AQ9UPW8 1703 aa29.67■■■□□ 2.34
FDFT1-215ENST00000529464 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
FDFT1-215ENST00000529464 BICRAQ9NZM4 1560 aa29.58■■■□□ 2.33
FDFT1-215ENST00000529464 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
FDFT1-215ENST00000529464 SCRIBQ14160 1630 aa29.21■■■□□ 2.27
FDFT1-215ENST00000529464 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
FDFT1-215ENST00000529464 CC2D2AQ9P2K1 1620 aa28.88■■■□□ 2.21
FDFT1-215ENST00000529464 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
FDFT1-215ENST00000529464 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
FDFT1-215ENST00000529464 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
FDFT1-215ENST00000529464 ATAD2BQ9ULI0 1458 aa27.88■■■□□ 2.05
FDFT1-215ENST00000529464 SMARCA4P51532 1647 aa27.82■■■□□ 2.04
FDFT1-215ENST00000529464 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
FDFT1-215ENST00000529464 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
FDFT1-215ENST00000529464 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
FDFT1-215ENST00000529464 ERCC6Q03468 1493 aa27.63■■■□□ 2.01
FDFT1-215ENST00000529464 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
FDFT1-215ENST00000529464 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
FDFT1-215ENST00000529464 NESP48681 1621 aa27.56■■■□□ 2
FDFT1-215ENST00000529464 PEG3Q9GZU2 1588 aa27.52■■■□□ 2
FDFT1-215ENST00000529464 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
FDFT1-215ENST00000529464 CUX2O14529 1486 aa27.51■■□□□ 1.99
FDFT1-215ENST00000529464 LAMC3Q9Y6N6 1575 aa27.24■■□□□ 1.95
FDFT1-215ENST00000529464 THOC2Q8NI27 1593 aaKnown RBP27.19■■□□□ 1.94
FDFT1-215ENST00000529464 WIZO95785 1651 aa27.19■■□□□ 1.94
FDFT1-215ENST00000529464 PDS5BQ9NTI5 1447 aa27.12■■□□□ 1.93
FDFT1-215ENST00000529464 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
FDFT1-215ENST00000529464 KIF21AQ7Z4S6 1674 aa27.1■■□□□ 1.93
FDFT1-215ENST00000529464 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
FDFT1-215ENST00000529464 MRC2Q9UBG0 1479 aa26.92■■□□□ 1.9
FDFT1-215ENST00000529464 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
FDFT1-215ENST00000529464 WDR62O43379 1518 aa26.83■■□□□ 1.89
FDFT1-215ENST00000529464 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
FDFT1-215ENST00000529464 FANCD2Q9BXW9 1451 aa26.8■■□□□ 1.88
FDFT1-215ENST00000529464 CFTRP13569 1480 aa26.79■■□□□ 1.88
FDFT1-215ENST00000529464 URB2Q14146 1524 aaKnown RBP26.6■■□□□ 1.85
FDFT1-215ENST00000529464 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
FDFT1-215ENST00000529464 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
FDFT1-215ENST00000529464 PRDM2Q13029 1718 aa26.37■■□□□ 1.81
FDFT1-215ENST00000529464 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
FDFT1-215ENST00000529464 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
FDFT1-215ENST00000529464 ZNF608Q9ULD9 1512 aaPredicted RBP26.29■■□□□ 1.8
FDFT1-215ENST00000529464 IFT140Q96RY7 1462 aa26.26■■□□□ 1.79
FDFT1-215ENST00000529464 DNMBPQ6XZF7 1577 aa26.17■■□□□ 1.78
FDFT1-215ENST00000529464 ABCC8Q09428 1581 aa26.15■■□□□ 1.78
FDFT1-215ENST00000529464 EIF4G3O43432 1585 aaKnown RBP26.08■■□□□ 1.77
FDFT1-215ENST00000529464 AQRO60306 1485 aaKnown RBP eCLIP26.05■■□□□ 1.763e-7■■■■□ 23.5
FDFT1-215ENST00000529464 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
FDFT1-215ENST00000529464 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
FDFT1-215ENST00000529464 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
FDFT1-215ENST00000529464 RIMBP3CA6NJZ7 1639 aa25.94■■□□□ 1.74
FDFT1-215ENST00000529464 RIMBP3BA6NNM3 1639 aa25.94■■□□□ 1.74
FDFT1-215ENST00000529464 RIMBP3Q9UFD9 1639 aa25.94■■□□□ 1.74
FDFT1-215ENST00000529464 SOGA1O94964 1423 aa25.91■■□□□ 1.74
FDFT1-215ENST00000529464 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
FDFT1-215ENST00000529464 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
FDFT1-215ENST00000529464 ARHGEF11O15085 1522 aa25.89■■□□□ 1.74
FDFT1-215ENST00000529464 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.73
FDFT1-215ENST00000529464 FBLN2P98095 1184 aa25.88■■□□□ 1.73
FDFT1-215ENST00000529464 CUX1P39880 1505 aa25.88■■□□□ 1.73
FDFT1-215ENST00000529464 CHD1O14646 1710 aa25.83■■□□□ 1.73
FDFT1-215ENST00000529464 SNAPC4Q5SXM2 1469 aa25.77■■□□□ 1.72
FDFT1-215ENST00000529464 CYB5RLQ6IPT4 315 aa25.73■■□□□ 1.71
FDFT1-215ENST00000529464 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
FDFT1-215ENST00000529464 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
FDFT1-215ENST00000529464 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
FDFT1-215ENST00000529464 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
FDFT1-215ENST00000529464 MAGI1Q96QZ7 1491 aaPredicted RBP25.64■■□□□ 1.69
FDFT1-215ENST00000529464 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
FDFT1-215ENST00000529464 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
FDFT1-215ENST00000529464 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
FDFT1-215ENST00000529464 ABCA10Q8WWZ4 1543 aa25.56■■□□□ 1.68
FDFT1-215ENST00000529464 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
FDFT1-215ENST00000529464 ABCA5Q8WWZ7 1642 aa25.51■■□□□ 1.67
FDFT1-215ENST00000529464 PBRM1Q86U86 1689 aa25.51■■□□□ 1.67
FDFT1-215ENST00000529464 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.67
FDFT1-215ENST00000529464 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
FDFT1-215ENST00000529464 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
FDFT1-215ENST00000529464 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.66
FDFT1-215ENST00000529464 GRIN2AQ12879 1464 aa25.35■■□□□ 1.65
FDFT1-215ENST00000529464 ADAMTS12P58397 1594 aa25.33■■□□□ 1.65
FDFT1-215ENST00000529464 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
FDFT1-215ENST00000529464 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
FDFT1-215ENST00000529464 NUP160Q12769 1436 aa25.26■■□□□ 1.63
FDFT1-215ENST00000529464 ERCC6L2Q5T890 1561 aa25.26■■□□□ 1.63
FDFT1-215ENST00000529464 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
FDFT1-215ENST00000529464 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
FDFT1-215ENST00000529464 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
FDFT1-215ENST00000529464 JPH4Q96JJ6 628 aa25.01■■□□□ 1.59
FDFT1-215ENST00000529464 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
FDFT1-215ENST00000529464 IGF1RP08069 1367 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms