RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 KIF27Q86VH2 1401 aa32■■■□□ 2.71
YIF1A-212ENST00000528575 CUL7Q14999 1698 aa31.95■■■□□ 2.7
YIF1A-212ENST00000528575 KIAA0586Q9BVV6 1533 aa31.9■■■□□ 2.7
YIF1A-212ENST00000528575 KIF13AQ9H1H9 1805 aa31.84■■■□□ 2.69
YIF1A-212ENST00000528575 ADCY10Q96PN6 1610 aa31.81■■■□□ 2.68
YIF1A-212ENST00000528575 CARMIL1Q5VZK9 1371 aa31.81■■■□□ 2.68
YIF1A-212ENST00000528575 MAPKBP1O60336 1514 aa31.67■■■□□ 2.66
YIF1A-212ENST00000528575 ABCC10Q5T3U5 1492 aa31.64■■■□□ 2.66
YIF1A-212ENST00000528575 IQGAP2Q13576 1575 aa31.6■■■□□ 2.65
YIF1A-212ENST00000528575 DIP2BQ9P265 1576 aa31.6■■■□□ 2.65
YIF1A-212ENST00000528575 DISP1Q96F81 1524 aa31.57■■■□□ 2.64
YIF1A-212ENST00000528575 PTPRGP23470 1445 aa31.54■■■□□ 2.64
YIF1A-212ENST00000528575 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
YIF1A-212ENST00000528575 FAM69CQ0P6D2 419 aa31.51■■■□□ 2.63
YIF1A-212ENST00000528575 TNIKQ9UKE5 1360 aa31.5■■■□□ 2.63
YIF1A-212ENST00000528575 UGGT2Q9NYU1 1516 aa31.46■■■□□ 2.63
YIF1A-212ENST00000528575 CARMIL2Q6F5E8 1435 aa31.44■■■□□ 2.62
YIF1A-212ENST00000528575 NPM1P06748 294 aaKnown RBP eCLIP31.44■■■□□ 2.62
YIF1A-212ENST00000528575 TTBK1Q5TCY1 1321 aaPredicted RBP31.43■■■□□ 2.62
YIF1A-212ENST00000528575 ABCC2Q92887 1545 aa31.42■■■□□ 2.62
YIF1A-212ENST00000528575 EEA1Q15075 1411 aa31.41■■■□□ 2.62
YIF1A-212ENST00000528575 UHRF1BP1LA0JNW5 1464 aa31.39■■■□□ 2.62
YIF1A-212ENST00000528575 KIAA0556O60303 1618 aa31.37■■■□□ 2.61
YIF1A-212ENST00000528575 PRXQ9BXM0 1461 aa31.34■■■□□ 2.61
YIF1A-212ENST00000528575 UACAQ9BZF9 1416 aa31.33■■■□□ 2.61
YIF1A-212ENST00000528575 CHIC1Q5VXU3 224 aa31.32■■■□□ 2.6
YIF1A-212ENST00000528575 TSPOAP1O95153 1857 aa31.31■■■□□ 2.6
YIF1A-212ENST00000528575 ASXL2Q76L83 1435 aa31.31■■■□□ 2.6
YIF1A-212ENST00000528575 CTTNBP2Q8WZ74 1663 aa31.29■■■□□ 2.6
YIF1A-212ENST00000528575 PPRC1Q5VV67 1664 aaKnown RBP31.29■■■□□ 2.6
YIF1A-212ENST00000528575 KDM5BQ9UGL1 1544 aa31.27■■■□□ 2.6
YIF1A-212ENST00000528575 CSRNP3Q8WYN3 585 aa31.24■■■□□ 2.59
YIF1A-212ENST00000528575 GLI2P10070 1586 aa31.23■■■□□ 2.59
YIF1A-212ENST00000528575 PLB1Q6P1J6 1458 aa31.21■■■□□ 2.59
YIF1A-212ENST00000528575 KDM6BO15054 1643 aa31.2■■■□□ 2.59
YIF1A-212ENST00000528575 ZCCHC11Q5TAX3 1644 aaKnown RBP31.2■■■□□ 2.59
YIF1A-212ENST00000528575 AEBP2Q6ZN18 517 aaPredicted RBP31.16■■■□□ 2.58
YIF1A-212ENST00000528575 EPRSP07814 1512 aaKnown RBP31.15■■■□□ 2.58
YIF1A-212ENST00000528575 ABCA8O94911 1581 aa31.12■■■□□ 2.57
YIF1A-212ENST00000528575 MAP3K4Q9Y6R4 1608 aa31.09■■■□□ 2.57
YIF1A-212ENST00000528575 COL17A1Q9UMD9 1497 aaPredicted RBP31.08■■■□□ 2.57
YIF1A-212ENST00000528575 GOLGA3Q08378 1498 aa31.04■■■□□ 2.56
YIF1A-212ENST00000528575 WDR7Q9Y4E6 1490 aa31■■■□□ 2.55
YIF1A-212ENST00000528575 KDM4FA0A1W2PPD8 638 aa30.98■■■□□ 2.55
YIF1A-212ENST00000528575 KIF21BO75037 1637 aa30.98■■■□□ 2.55
YIF1A-212ENST00000528575 SAMD9Q5K651 1589 aa30.94■■■□□ 2.54
YIF1A-212ENST00000528575 FAM9AQ8IZU1 332 aaPredicted RBP30.91■■■□□ 2.54
YIF1A-212ENST00000528575 P3H3Q8IVL6 736 aa30.88■■■□□ 2.53
YIF1A-212ENST00000528575 ATP10BO94823 1461 aa30.83■■■□□ 2.53
YIF1A-212ENST00000528575 TEX14Q8IWB6 1497 aa30.82■■■□□ 2.52
YIF1A-212ENST00000528575 MAGI3Q5TCQ9 1506 aa30.79■■■□□ 2.52
YIF1A-212ENST00000528575 CFAP43Q8NDM7 1665 aa30.79■■■□□ 2.52
YIF1A-212ENST00000528575 ARID3CA6NKF2 412 aa30.77■■■□□ 2.52
YIF1A-212ENST00000528575 CD109Q6YHK3 1445 aa30.76■■■□□ 2.51
YIF1A-212ENST00000528575 KCNH8Q96L42 1107 aa30.76■■■□□ 2.51
YIF1A-212ENST00000528575 RAPGEF6Q8TEU7 1601 aa30.72■■■□□ 2.51
YIF1A-212ENST00000528575 FHOD3Q2V2M9 1422 aa30.69■■■□□ 2.5
YIF1A-212ENST00000528575 ADGRL1O94910 1474 aa30.69■■■□□ 2.5
YIF1A-212ENST00000528575 NUP153P49790 1475 aaKnown RBP30.69■■■□□ 2.5
YIF1A-212ENST00000528575 EFCAB5A4FU69 1503 aa30.64■■■□□ 2.5
YIF1A-212ENST00000528575 ABCA9Q8IUA7 1624 aa30.64■■■□□ 2.5
YIF1A-212ENST00000528575 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
YIF1A-212ENST00000528575 RANGAP1P46060 587 aaPredicted RBP30.6■■■□□ 2.49
YIF1A-212ENST00000528575 ARAP3Q8WWN8 1544 aa30.56■■■□□ 2.48
YIF1A-212ENST00000528575 FRMPD1Q5SYB0 1578 aa30.45■■■□□ 2.46
YIF1A-212ENST00000528575 EHMT2Q96KQ7 1210 aa30.4■■■□□ 2.46
YIF1A-212ENST00000528575 NEO1Q92859 1461 aa30.39■■■□□ 2.46
YIF1A-212ENST00000528575 ARHGAP35Q9NRY4 1499 aa30.38■■■□□ 2.45
YIF1A-212ENST00000528575 CDK13Q14004 1512 aaKnown RBP30.38■■■□□ 2.45
YIF1A-212ENST00000528575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.38■■■□□ 2.45
YIF1A-212ENST00000528575 HNRNPUL2Q1KMD3 747 aaKnown RBP30.38■■■□□ 2.45
YIF1A-212ENST00000528575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.37■■■□□ 2.456e-8■■■■□ 20.3
YIF1A-212ENST00000528575 RAPGEF3O95398 923 aa30.37■■■□□ 2.45
YIF1A-212ENST00000528575 FMN1Q68DA7 1419 aa30.36■■■□□ 2.45
YIF1A-212ENST00000528575 TTC37Q6PGP7 1564 aa30.36■■■□□ 2.45
YIF1A-212ENST00000528575 PHLDB1Q86UU1 1377 aa30.35■■■□□ 2.45
YIF1A-212ENST00000528575 PLEKHD1A6NEE1 506 aa30.27■■■□□ 2.44
YIF1A-212ENST00000528575 RICTORQ6R327 1708 aa30.26■■■□□ 2.43
YIF1A-212ENST00000528575 HECW2Q9P2P5 1572 aa30.26■■■□□ 2.43
YIF1A-212ENST00000528575 ADAMTSL3P82987 1691 aa30.23■■■□□ 2.43
YIF1A-212ENST00000528575 LRRIQ1Q96JM4 1722 aa30.23■■■□□ 2.43
YIF1A-212ENST00000528575 AKNAQ7Z591 1439 aa30.22■■■□□ 2.43
YIF1A-212ENST00000528575 FANCAO15360 1455 aa30.21■■■□□ 2.43
YIF1A-212ENST00000528575 CLIP1P30622 1438 aa30.19■■■□□ 2.42
YIF1A-212ENST00000528575 SIGLEC1Q9BZZ2 1709 aa30.18■■■□□ 2.42
YIF1A-212ENST00000528575 HECW1Q76N89 1606 aa30.18■■■□□ 2.42
YIF1A-212ENST00000528575 DENND4BO75064 1496 aaPredicted RBP30.16■■■□□ 2.42
YIF1A-212ENST00000528575 ARHGEF40Q8TER5 1519 aa30.16■■■□□ 2.42
YIF1A-212ENST00000528575 KIF14Q15058 1648 aa30.14■■■□□ 2.42
YIF1A-212ENST00000528575 BCORL1Q5H9F3 1711 aa30.13■■■□□ 2.41
YIF1A-212ENST00000528575 ZMYM4Q5VZL5 1548 aa30.12■■■□□ 2.41
YIF1A-212ENST00000528575 PLCH2O75038 1416 aa30.12■■■□□ 2.41
YIF1A-212ENST00000528575 CFAP74Q9C0B2 1584 aa30.11■■■□□ 2.41
YIF1A-212ENST00000528575 PTPRMP28827 1452 aa30.09■■■□□ 2.41
YIF1A-212ENST00000528575 YEATS2Q9ULM3 1422 aa30.09■■■□□ 2.41
YIF1A-212ENST00000528575 MADDQ8WXG6 1647 aa30.07■■■□□ 2.4
YIF1A-212ENST00000528575 CASKIN1Q8WXD9 1431 aa30.07■■■□□ 2.4
YIF1A-212ENST00000528575 PCF11O94913 1555 aaKnown RBP30.04■■■□□ 2.4
YIF1A-212ENST00000528575 CDK11AQ9UQ88 783 aaPredicted RBP30.04■■■□□ 2.4
YIF1A-212ENST00000528575 CEP162Q5TB80 1403 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms