RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 KIAA0586Q9BVV6 1533 aa18.9■□□□□ 0.62
TMX2-CTNND1-201ENST00000528395 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
TMX2-CTNND1-201ENST00000528395 RAPGEF2Q9Y4G8 1499 aa18.89■□□□□ 0.61
TMX2-CTNND1-201ENST00000528395 EEA1Q15075 1411 aa18.85■□□□□ 0.61
TMX2-CTNND1-201ENST00000528395 CSRNP3Q8WYN3 585 aa18.83■□□□□ 0.6
TMX2-CTNND1-201ENST00000528395 PRXQ9BXM0 1461 aa18.83■□□□□ 0.6
TMX2-CTNND1-201ENST00000528395 PRG4Q92954 1404 aaPredicted RBP18.83■□□□□ 0.6
TMX2-CTNND1-201ENST00000528395 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
TMX2-CTNND1-201ENST00000528395 IQGAP2Q13576 1575 aa18.75■□□□□ 0.59
TMX2-CTNND1-201ENST00000528395 CARMIL2Q6F5E8 1435 aa18.71■□□□□ 0.59
TMX2-CTNND1-201ENST00000528395 UGGT2Q9NYU1 1516 aa18.68■□□□□ 0.58
TMX2-CTNND1-201ENST00000528395 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
TMX2-CTNND1-201ENST00000528395 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
TMX2-CTNND1-201ENST00000528395 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
TMX2-CTNND1-201ENST00000528395 PTPRGP23470 1445 aa18.63■□□□□ 0.57
TMX2-CTNND1-201ENST00000528395 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
TMX2-CTNND1-201ENST00000528395 KIF21BO75037 1637 aa18.6■□□□□ 0.57
TMX2-CTNND1-201ENST00000528395 GOLGA3Q08378 1498 aa18.59■□□□□ 0.57
TMX2-CTNND1-201ENST00000528395 KIAA0556O60303 1618 aa18.56■□□□□ 0.56
TMX2-CTNND1-201ENST00000528395 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
TMX2-CTNND1-201ENST00000528395 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
TMX2-CTNND1-201ENST00000528395 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.55
TMX2-CTNND1-201ENST00000528395 TTBK1Q5TCY1 1321 aaPredicted RBP18.5■□□□□ 0.55
TMX2-CTNND1-201ENST00000528395 UACAQ9BZF9 1416 aa18.49■□□□□ 0.55
TMX2-CTNND1-201ENST00000528395 UHRF1BP1LA0JNW5 1464 aa18.49■□□□□ 0.55
TMX2-CTNND1-201ENST00000528395 UBTFP17480 764 aaKnown RBP18.47■□□□□ 0.55
TMX2-CTNND1-201ENST00000528395 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
TMX2-CTNND1-201ENST00000528395 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
TMX2-CTNND1-201ENST00000528395 SAMD9Q5K651 1589 aa18.45■□□□□ 0.54
TMX2-CTNND1-201ENST00000528395 P3H3Q8IVL6 736 aa18.4■□□□□ 0.54
TMX2-CTNND1-201ENST00000528395 EFCAB5A4FU69 1503 aa18.39■□□□□ 0.54
TMX2-CTNND1-201ENST00000528395 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.54
TMX2-CTNND1-201ENST00000528395 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.53
TMX2-CTNND1-201ENST00000528395 ABCA8O94911 1581 aa18.38■□□□□ 0.53
TMX2-CTNND1-201ENST00000528395 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
TMX2-CTNND1-201ENST00000528395 RANGAP1P46060 587 aaPredicted RBP18.37■□□□□ 0.53
TMX2-CTNND1-201ENST00000528395 ABCC10Q5T3U5 1492 aa18.37■□□□□ 0.53
TMX2-CTNND1-201ENST00000528395 ASXL2Q76L83 1435 aa18.32■□□□□ 0.52
TMX2-CTNND1-201ENST00000528395 FAM69CQ0P6D2 419 aa18.32■□□□□ 0.52
TMX2-CTNND1-201ENST00000528395 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
TMX2-CTNND1-201ENST00000528395 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
TMX2-CTNND1-201ENST00000528395 KIF13AQ9H1H9 1805 aa18.3■□□□□ 0.52
TMX2-CTNND1-201ENST00000528395 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
TMX2-CTNND1-201ENST00000528395 RAPGEF6Q8TEU7 1601 aa18.27■□□□□ 0.51
TMX2-CTNND1-201ENST00000528395 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
TMX2-CTNND1-201ENST00000528395 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
TMX2-CTNND1-201ENST00000528395 ATP10BO94823 1461 aa18.24■□□□□ 0.51
TMX2-CTNND1-201ENST00000528395 GLI2P10070 1586 aa18.24■□□□□ 0.51
TMX2-CTNND1-201ENST00000528395 WDR7Q9Y4E6 1490 aa18.23■□□□□ 0.51
TMX2-CTNND1-201ENST00000528395 EPRSP07814 1512 aaKnown RBP18.22■□□□□ 0.51
TMX2-CTNND1-201ENST00000528395 NUP153P49790 1475 aaKnown RBP18.21■□□□□ 0.51
TMX2-CTNND1-201ENST00000528395 ARID3CA6NKF2 412 aa18.17■□□□□ 0.5
TMX2-CTNND1-201ENST00000528395 CLIP1P30622 1438 aa18.16■□□□□ 0.5
TMX2-CTNND1-201ENST00000528395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
TMX2-CTNND1-201ENST00000528395 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
TMX2-CTNND1-201ENST00000528395 KCNH8Q96L42 1107 aa18.14■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 PLEKHD1A6NEE1 506 aa18.12■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 MAP3K4Q9Y6R4 1608 aa18.12■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 TSPOAP1O95153 1857 aa18.1■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 HECW1Q76N89 1606 aa18.1■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 TEX14Q8IWB6 1497 aa18.08■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 CD109Q6YHK3 1445 aa18.08■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 CASKIN1Q8WXD9 1431 aa18.08■□□□□ 0.49
TMX2-CTNND1-201ENST00000528395 ATP1B4Q9UN42 357 aaPredicted RBP18.08■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 CEP162Q5TB80 1403 aa18.07■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 CFAP43Q8NDM7 1665 aa18.07■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 CDK11AQ9UQ88 783 aaPredicted RBP18.07■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 MAGI3Q5TCQ9 1506 aa18.06■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 CDK13Q14004 1512 aaKnown RBP18.04■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 ABCA9Q8IUA7 1624 aa18.04■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 FYCO1Q9BQS8 1478 aa18.03■□□□□ 0.48
TMX2-CTNND1-201ENST00000528395 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
TMX2-CTNND1-201ENST00000528395 KDM6BO15054 1643 aa18.01■□□□□ 0.47
TMX2-CTNND1-201ENST00000528395 PCF11O94913 1555 aaKnown RBP18■□□□□ 0.47
TMX2-CTNND1-201ENST00000528395 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
TMX2-CTNND1-201ENST00000528395 TROQ12816 1431 aaPredicted RBP17.96■□□□□ 0.47
TMX2-CTNND1-201ENST00000528395 LRRIQ1Q96JM4 1722 aa17.95■□□□□ 0.46
TMX2-CTNND1-201ENST00000528395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.94■□□□□ 0.464e-13■■■■■ 27.4
TMX2-CTNND1-201ENST00000528395 COL17A1Q9UMD9 1497 aaPredicted RBP17.93■□□□□ 0.46
TMX2-CTNND1-201ENST00000528395 NEO1Q92859 1461 aa17.92■□□□□ 0.46
TMX2-CTNND1-201ENST00000528395 ARAP3Q8WWN8 1544 aa17.91■□□□□ 0.46
TMX2-CTNND1-201ENST00000528395 TTC37Q6PGP7 1564 aa17.89■□□□□ 0.45
TMX2-CTNND1-201ENST00000528395 KIF14Q15058 1648 aa17.89■□□□□ 0.45
TMX2-CTNND1-201ENST00000528395 PLCH2O75038 1416 aa17.89■□□□□ 0.45
TMX2-CTNND1-201ENST00000528395 VPS8Q8N3P4 1428 aa17.87■□□□□ 0.45
TMX2-CTNND1-201ENST00000528395 FANCAO15360 1455 aa17.86■□□□□ 0.45
TMX2-CTNND1-201ENST00000528395 CFAP74Q9C0B2 1584 aa17.84■□□□□ 0.45
TMX2-CTNND1-201ENST00000528395 AKNAQ7Z591 1439 aa17.83■□□□□ 0.45
TMX2-CTNND1-201ENST00000528395 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.44
TMX2-CTNND1-201ENST00000528395 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
TMX2-CTNND1-201ENST00000528395 MYO5CQ9NQX4 1742 aa17.81■□□□□ 0.44
TMX2-CTNND1-201ENST00000528395 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
TMX2-CTNND1-201ENST00000528395 RAPGEF3O95398 923 aa17.78■□□□□ 0.44
TMX2-CTNND1-201ENST00000528395 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 ARHGAP5Q13017 1502 aa17.76■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 MAP3K1Q13233 1512 aa17.76■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 ADGRL1O94910 1474 aa17.75■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 TIAM1Q13009 1591 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms